FFCP PHASE1:Hg19::chr13:51483983..51483994,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79621 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25671 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=44bp_to_ENST00000459983_5end | |||
|description=CAGE_peak_5_at_RNASEH2B_5end | |||
|id=chr13:51483983..51483994,+ | |||
|ontology_enrichment_celltype=CL:0000988!7.51e-14!182;CL:0000037!1.19e-13!172;CL:0000566!1.19e-13!172;CL:0002032!5.91e-12!165;CL:0000837!5.91e-12!165;CL:0000542!6.67e-10!53;CL:0000051!6.67e-10!53;CL:0000838!1.16e-09!52;CL:0000236!2.32e-08!14;CL:0000945!7.58e-08!24;CL:0000826!7.58e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.70e-14;13!CL:0000945;2.62e-09;24!CL:0000542;1.03e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.57e-23,168;CL:0002032,3.83e-21,161;CL:0000837,3.83e-21,161;CL:0000988,6.35e-21,177;CL:0000236,6.01e-14,14;CL:0000763,5.19e-12,108;CL:0000049,5.19e-12,108;CL:0000945,7.80e-10,24;CL:0000826,7.80e-10,24;CL:0000838,1.30e-09,52;CL:0000542,2.52e-09,53;CL:0000051,2.52e-09,53;CL:0000219,8.98e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000051;1.03e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!5.77e-18!51;DOID:0060083!5.77e-18!51;DOID:1240!3.39e-16!39;DOID:8692!1.25e-12!31;DOID:162!1.07e-09!235;DOID:14566!2.30e-09!239;DOID:0050686!8.85e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.18e-33;31!DOID:1240;2.57e-30;39!DOID:2531;1.81e-23;51!DOID:0060083;1.81e-23;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.52e-41,51;DOID:0060083,5.52e-41,51;DOID:1240,2.27e-39,39;DOID:8692,3.18e-35,31;DOID:0050686,2.95e-13,137;DOID:162,5.06e-08,235;DOID:14566,1.38e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0.730310090387373,0.487932798790507,0.369363174230364,0.816002764977012,0,2.0036519099174,1.09499540058307,1.38096903554283,0.229240217243854,0.57470412614962,0.472264687882075,0,0.767658796194425,0.464448369948228,0,0,0,0.697204805222715,1.42169232487422,7.63361142270603,0.553995408531877,0.401088894940283,0.217010870715852,1.11957737119962,1.6194683300949,1.03030227053675,0.290796477559129,0,0,0,0,0,0.863077176966451,0.512321413058201,0.47296445977717,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0.989553900560148,0.797854630486527,0.426224750532694,0,0.56738522469114,0,0,0,0.434377689410233,0,0,0,0.633765858935825,0.425208599930087,1.67726916406701,0.336985893439485,0,0,0.570025487482497,0.59675003159727,1.0959849225878,1.75996244461323,3.27683166757279,1.77901850772711,2.98711155796555,1.20118796110804,3.4485146397269,5.2883589822789,0.954053754535364,1.70763890732835,0.587237189370939,1.91136614062614,0,0.560508562981536,2.63384084775077,0.196709770113833,0,0.822405995998037,1.00311897234407,0.32592226663359,0,0,0.445641827540694,2.3568472597987,1.32920336750173,1.89562704635511,0.768547918354051,0.780356085359269,1.15106533222573,1.10540007114339,1.15921234294021,0.444859689486181,0,0,0.679856056185397,1.14966148080576,1.03088233644789,0.506039384039006,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0.76791966692651,0,0.947109008176067,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0.670700859703636,0.511450247374121,0.722878304769133,0.50133791063589,0,0,0,0.661743720148475,0.665188192387692,0.790513071238134,0.0654895377488563,0,0,0,0,0.26591592103773,0.715471872916026,0.571994910780128,3.34311751196608,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0.535798369704479,0.22452937262617,0.337834441449967,0,0,0.183201743930407,1.31780417436063,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.74000264525148,0,0.269421344139376,0.163461903113459,0.302714855289863,0,0,0.936480230490962,0,0.448346041655403,0.704606991862589,1.13311061057692,0.842704840213491,0.204154171254893,0.859840221182376,0.413303124703062,0,0,0,0,0.505008341862199,0.625592599359821,0.277064115484183,0,0.30648779579902,0.150238058906597,0.453728732640084,0.89694817844431,0,0.635795703478686,0,0.206105058476878,0.515281080091258,0,0.675105328965065,0.292311015483596,0,0.0920498986422993,0.323292113637624,0.355009592516614,0.604512589365842,0.339121184620975,0.193260853163297,0,0.573609190778008,0.365921118388786,0.662648841607426,0.580969714347592,0.621966330092223,0.756962552626885,3.28479623168247,0,0.643240938192885,0,0,0,0.591534000199219,0.674338760312407,1.44606617930089,0.55146986366197,0.871517776369625,0.71181185733329,0.539325232640658,1.17732879075208,0,0,0,0,0,0,0,0,11.4780405847809,0.245976877086227,0.343135620597051,0.109750285408626,0,0.201057944823262,0,0,0,0,0.231860809950154,0.117408694235822,0.433099343283221,0,0,0.790204397959275,0,1.23108503043699,0.234004265139238,1.0404181360211,0,0.335964256397719,0.850650583454319,0.358234090811393,0,0,0,0.352193736052904,0.207328115540772,0.288239906833923,0.37872730027914,0.253991577168676,0,1.17217447210047,0,0.514137463516618,0,0,0.560655421726804,0,0.51336800074665,0.775630294546667,0,0,0,0,1.02882949704857,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,1.00451418286425,0,0.239624855491583,0,0,0,0,0.358121926479791,0.896681151948218,0.394061520403854,0.215627574859517,0.513372145118994,0.76228387266739,1.30139853857622,0.773288812777695,1.67516265334349,3.18969375826582,0,0,0.414415513436035,0,0,0.542530047399471,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,3.10419213877515,0,0,0.173767228936166,0.783204629850962,0.343143423810856,0.413536052245775,0.862856803274467,0.320182673410333,0.303127571446259,1.66435439510497,0,0.496215615637554,0.153461973288062,0,0.256278298511402,0,0,0,0.462629081407967,0.887808626565635,0.246381468041427,0,0.116210378459959,1.0877350463246,0.40101294060657,0.0920809889358963,0.114814448164607,0.364182336013434,0,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0.501689773854853,0.764628819135115,0,0.671624264166535,0.657779629937804,1.5686127061494,0.256450125116389,0.656029291399411,0.650756789328606,0.103041011647722,0.0915694648183434,0.577566499444116,0.574265537996172,0,0,0.773365746336976,0.770243085573222,0.614014698904518,0.827019434907183,0.322260734604821,0.435050081742686,0.511359764496605,0.534192213880424,0.165284915360978,0.384380134730212,0.765676274967505,0.30347334256665,0,0,0,0,0,0,0,0.286249773483982,1.116475108079,0,0.190630193923825,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,1.46290121726877,0,0,0,0.141405431953713,0,0,0,0.876901770507525,0.578775534266688,1.31178950409327,0,0,0.281695602532241,0.717056761020258,0.196498082026242,0,0,0.211107635297664,0,0.75894634753143,0,0.48111056362756,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,2.02979043692868,0.764637207142375,0,0.238231775457789,0.822724546172388,0.648473311192717,1.08006287447623,0.79312517629427,0.106824071127473,0.962479855263359,0.245040215981032,0.743212700502875,2.74111504655245,6.11819852796361,6.37705090915289,1.79621434289535,4.0216127727797,4.65681881992542,5.843194924942,3.65036331547496,12.5529073468256,3.29027781123349,2.50634477090067,3.21654377823046,3.21176150207399,3.43059502224781,3.40676990152261,7.55711758462682,9.21722292925374,7.60498766834214,6.50711652676443,5.27547857585509,2.78406173895242,0,1.6227340708559,2.33150377598474,1.4098700508785,0.37428108081644,0.293016358543788,0,0.445773537109913,0,0,0.593929361665277,0,0,0.140669416410513,0,1.31843099381408,0.211125408127993,0,0,0,0.306806047506464,0.246169610922139,0,0.539210106883961,0,5.11572370226872,0.197286811273867,0,1.11136990144637,0.969332746095218,0.0927680981618513,0,0.260427761085233,0.349839999984783,0,0.568967241427498,0.508507300585533,0.236387681767936,0.689486746482929,0.583209226766509,0.868124974666461,0,0.120596438625408,0,0.442317039724898,0.591095237907095,0.219385397153973,0.10893846351899,0.139423744278603,0.0769502585037971,0.797594390929008,0,0.718061155278177,0.434589487688032,0,0.366390373607449,0.533034776018635,6.13159789174419,1.09886179476517,1.82832850090172,0,0,0.167821586975843,1.3282761290693,1.58936578980379,0,0,0.282706142867882,0.649165919226273,0,0.0884575645033392,0,0.593042257361244,0.370691816839509,0.730953646538188,0.134802265961354,0.802577647298789,0,5.47364367646998,0.978323094660449,0.728341138602278,0,0,0.30607276163049,0.568679216656392,0.901940516486955,1.24425829676697,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0,0,0.195984794828755,0.435296032902013,0.17472666824203,0.343972064943233,0.290268993867255,0.219267951258557,0.492692742319255,0.387956065953678,0,0.225980740780532,0,0.397429223405979,0.0633107959558787,0.195551382734803,0.320635281006135,0.213452994739353,0.799238438328521,0.288180834308212,0.114536596165916,0.343189995723929,0,0.248505071130865,0,0.407712618220842,0.209205692624666,0.203996435272644,3.46740707881823,0,0.410716136675979,8.94226116468806,0,1.57732412567589,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0.360299883542404,0,0.315132729228895,0.247247575143499,0.13480708770837,0.688992370603241,1.52411997718412,0,0.136203406111576,1.92903778158023,1.2378549293751,0.83088067605837,0.2249738915515,0,0,0.670869375198532,0,0.209818352539992,0.211200673038813,0.179287339332845,0,0,0.662091970365432,0.76280561296425,0.542999601753713,0,0,0,0.164185041498678,0.851940108927109,0.226624183040251,0,1.32506888912221,0,0,0.171086837884329,0.704815022316672,0.320362237703084,0.314408610199332,0,0,0.197611631897944,0.730755590285376,0,0,0,0.306345576763462,0,0.314108192500469,0.886068179966986,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.124192805882767,1.38348634936231,0.624902039810533,0.909894705249887,0,0,0.936669811613763,0.434763085832475,0.895528817321244,0.701139929541673,0,0.378806010550178,1.0062716070103,0.889811221596536,0,0.302461847526478,0.466311601748341,0.147855149989634,0.159296767163702,0,0.621051827505038,0.829412415681711,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,1.20008329398946,1.03018711554838,2.02049693259551,0,0,0,1.56596575179127,0.906823702049089,0.231522474323834,0.489473409012935,0,0.617602894321944,0.877136198314828,0.530067437837643,2.12205442098006,0.506827321959218,0.512483037175893,2.07258205038719,0.607719912354764,0,0.974301544196942,0.398594520940089,0.327130788511688,1.63804924423206,0.245772908753719,0,1.19992437512958,3.84090226898907,0,0,1.10463570151104,0,0,2.17420431216208,0.107824811396682,0.314531883711793,2.18419276384028,0.678930119816101,0.637724760305049,1.23935764259002,1.11728983594649,0,5.67804564009024,0.80057074828547,0,0.3062454773532,0.0642292250964595,0,0,0.205116364240755,0.504143392443436,0.0691572524642179,0.322951291263702,0,0.490738592505128,0.589848616738702,0.733714394086716,0.808679663052368,0,0,1.98916222116275,0.0752103283492573,0.40341013740704,0,1.57144016688853,0.49131575253029,0.591424344868181,0,0.781078098613847,0,0,2.18789923607288,0.548257766857182,0,0.175871244359621,1.14986184875636,0,0.336283722218824,0,0.227662191351298,0.266107110487916,0.576169937778896,0.342976018874837,0.271878931907327,0.131545547125698,0.472775363535873,0.111231401892069,0,0.157115589916002,1.40136081656895,0,0.215927591218621,0.47775168788705,0.142953088353313,0.632054446930906,0.464965701472501,1.39086617842064,0,0,0.17071847709395,0,0,0.118332000730565,0.681707238073262,0,0.68732060563215,0,0.955538938977433,0.335566295393377,0.196300467230486,0.121917924982269,0.647428837187895,0.102662806856247,1.1598144313382,0.485710993059139,0.467878926924211,0.198950775161368,0,0.45178432815584,0,0,0.231522474323834,0.655678681511872,0,0,0.707029641304878,0,0,0.8453114551668,0,0.187967835959707,0.45120521581504,0.599646935549574,0,0,0.0802413666891683,0,0.458729283404541,0.143339583151451,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0,0.378499274505237,0.764859003745869,2.15387451719443,0.917899467677836,0.26721740526556,0.275684698604535,0.250707539292375,0.454672189309436,0.267964130156178,0,0.310298987585686,0.639701945702943,0.476128862927481,3.81074568032436,2.3588391432426,0.224263725161227,0.0636471582781649,0.202117188958219,0.217716747896961,0.342233301085281,0.471464371102113,0.215166616178029,0,0.814032686109745,0.106727345877715,0,0.269475606319761,0,0.244482888365733,0,0,2.21401172950129,0.320568492303233 | |||
|short_description=p5@RNASEH2B | |||
}} |
Revision as of 17:51, 11 January 2014
Short description: | p5@RNASEH2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RNASEH2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000459983_5end |
EntrezGene: | RNASEH2B |
HGNC: | 25671 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.57e-23 | 168 |
hematopoietic oligopotent progenitor cell | 3.83e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.83e-21 | 161 |
hematopoietic cell | 6.35e-21 | 177 |
B cell | 6.01e-14 | 14 |
myeloid cell | 5.19e-12 | 108 |
common myeloid progenitor | 5.19e-12 | 108 |
lymphocyte of B lineage | 7.80e-10 | 24 |
pro-B cell | 7.80e-10 | 24 |
lymphoid lineage restricted progenitor cell | 1.30e-09 | 52 |
lymphocyte | 2.52e-09 | 53 |
common lymphoid progenitor | 2.52e-09 | 53 |
motile cell | 8.98e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.52e-41 | 51 |
immune system cancer | 5.52e-41 | 51 |
leukemia | 2.27e-39 | 39 |
myeloid leukemia | 3.18e-35 | 31 |
organ system cancer | 2.95e-13 | 137 |
cancer | 5.06e-08 | 235 |
disease of cellular proliferation | 1.38e-07 | 239 |