FFCP PHASE1:Hg19::chr13:34392324..34392339,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9971 | |||
|TSSclassifier=strong | |||
|UniProt=Q5U0C2 | |||
|association_with_transcript=8bp_to_BT019668_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_4_at_RFC3_5end | |||
|id=chr13:34392324..34392339,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.78e-08!254;CL:0000012!2.42e-07!682;CL:0002319!6.53e-07!25;CL:0000548!8.31e-07!679;CL:0000004!8.31e-07!679;CL:0000255!8.31e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.98e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.64e-08,25;CL:0000133,7.85e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.00e-47!235;DOID:14566!1.18e-46!239;DOID:0050687!1.45e-26!143;DOID:0050686!3.20e-23!137;DOID:305!1.60e-22!106;DOID:2531!7.37e-15!51;DOID:0060083!7.37e-15!51;DOID:1240!1.72e-10!39;DOID:8692!2.42e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.65e-11;51!DOID:0060083;3.65e-11;51!DOID:1240;1.89e-10;39!DOID:8692;6.49e-09;31!DOID:0060058;3.93e-08;10!DOID:305;7.24e-08;106!DOID:0050687;8.65e-08;143!DOID:14566;3.25e-07;239!DOID:1749;4.29e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.13e-49,235;DOID:14566,1.16e-47,239;DOID:0050687,1.36e-24,143;DOID:0050686,1.37e-23,137;DOID:305,6.96e-22,106;DOID:2531,1.62e-18,51;DOID:0060083,1.62e-18,51;DOID:1240,2.19e-13,39;DOID:8692,5.55e-09,31;DOID:0060058,1.95e-08,10;DOID:1749,2.28e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.28e-08;9!UBERON:0001557;1.28e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.38e-08,9 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.861847406537515,0,0,1.43117993565528,1.23186982565596,0.753255837568817,1.91033514369878,2.38091709404843,2.99100968991981,0,0.383829398097213,0.154816123316076,0,0.90361775633475,0,7.90165445919077,2.55904618477359,1.46800219667424,1.10799081706375,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0.768482119587302,0,0,0,0,0.752969358170419,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0.422510572623884,0.425208599930087,0.419317291016752,0.44931452458598,0.150176892841506,0.32145117339416,0.285012743741249,0.79566670879636,0.730656615058536,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0,2.64342657158052,0.560508562981536,1.05353633910031,0.393419540227666,0.786021525498329,0.616804496998528,0.668745981562712,0.651844533267181,0,0,0.891283655081389,0.294605907474837,0.664601683750863,0.812411591295047,0.128091319725675,0.260118695119756,0.493313713811028,0.552700035571697,0,0.296573126324121,0,0,0.566546713487831,0,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0,0,0,0,0,1.00803371612366,0,0.289648807765598,0,0.670700859703636,0.511450247374121,0.361439152384566,0,0.289693037921647,0.795285947051099,0,1.22895262313288,0.886917589850256,0.790513071238134,0.327447688744282,0.364295288292542,0,0.324547393654683,0.174129737299267,0.26591592103773,0.953962497221368,0,0.371457501329565,0.596287222100115,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0.66944122552934,0.805658634218294,0,0,0.367663080345869,0,1.16089646769304,0.22452937262617,0.675668882899933,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,1.01304409331664,0.397227542439656,0,1.06400514659507,0,0,0.24666754841716,0,1.0776853765575,0.980771418680752,0.151357427644931,0,0,0,0.570471821544449,0.597794722207204,1.52664848236894,1.61872944368132,1.12360645361799,0.408308342509787,0.61417158655884,0,0,0.247266929278557,0,0,1.5150250255866,1.00094815897571,0.277064115484183,0,0,0,1.47461838108027,0.538168907066586,0.213557388818567,0,0.600182192168805,0.721367704669072,0.257640540045629,0.558350568994769,2.19409231913646,0.292311015483596,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.403008392910561,0.67824236924195,0.386521706326594,0.272746120590835,1.14721838155602,0.609868530647977,1.59035721985782,0.813357600086629,1.7622379352613,1.7662459561294,4.01475094983413,0,0,0,0.464367928031979,0,2.48444280083672,2.36018566109342,3.61516544825223,1.54411561825352,3.4860711054785,2.84724742933316,1.07865046528132,3.53198637225623,3.46272441251751,0.738155454624648,0,0,0,0,0.982827216677626,0,5.73902029239046,2.09080345523293,1.02940686179115,0.548751427043128,1.1240175325762,0.904760751704678,0.925884451585296,0,1.03993478527958,0,0.34779121492523,0.234817388471643,1.01056513432752,0.462985512576611,0.570762456703795,1.58040879591855,0.858486162094873,0,0.468008530278475,0.594524649154913,0,1.00789276919316,0.567100388969546,1.97028749946266,1.16253575405585,0,1.97065295158377,0.968532774145487,0,0.144119953416961,0,2.34942208881025,0,0,0,1.95372236136315,1.8020583470635,0.857479297891735,0.336393253036082,0.43596006883328,1.9067954313447,0,0,0,0,0,0.771622122786426,0,0.266422179016099,0.285955987316295,0,0,0.977208552881205,0,0.791951872933429,0,0,0.899756920638513,0,0,0,0.479249710983165,0,1.42636905040718,0.579125226670317,0.410952645100767,1.25342674267927,2.12961773587702,0.197030760201927,0.431255149719035,0.641715181398742,2.54094624222463,5.20559415430487,1.54657762555539,0.335032530668698,1.27587750330633,1.49801404789436,0,0.414415513436035,0.12269149171914,0,0.271265023699736,0.623912584592421,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0.737476674166813,0.695068915744663,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0.604780586659361,0,0.61384789315225,0,0.128139149255701,0.511707249066704,0.321707842287215,0,1.07946785661859,0.887808626565635,0.821271560138091,0,0.464841513839837,4.83437798366489,0.40101294060657,0.184161977871793,0.918515585316854,0.728364672026868,0,0.451199612907412,0.385076685522074,0,0,0.422206515571503,0,0.170093705276516,1.51141141271498,0,0,0,0,0,0.447749509444357,1.53481913652154,1.0457418040996,1.28225062558195,0.984043937099117,0.325378394664303,0.412164046590889,2.83865340936865,4.95056999523528,0,1.30012049207304,0,0.193341436584244,1.54048617114644,0.307007349452259,0.964856007391714,0.751941714077915,0.435050081742686,0.681813019328807,0.267096106940212,0.165284915360978,0.192190067365106,1.14851441245126,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0.539617372749944,0.274537029736055,0.706874414074119,0,0,0,0,0.487426979262569,0,0.136499911407986,0,1.1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| |||
|short_description=p4@RFC3 | |||
}} |
Revision as of 17:18, 11 January 2014
Short description: | p4@RFC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RFC3_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 8bp_to_BT019668_5end |
EntrezGene: | RFC3 |
HGNC: | 9971 |
UniProt: | Q5U0C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.64e-08 | 25 |
neurectodermal cell | 7.85e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.38e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.13e-49 | 235 |
disease of cellular proliferation | 1.16e-47 | 239 |
cell type cancer | 1.36e-24 | 143 |
organ system cancer | 1.37e-23 | 137 |
carcinoma | 6.96e-22 | 106 |
hematologic cancer | 1.62e-18 | 51 |
immune system cancer | 1.62e-18 | 51 |
leukemia | 2.19e-13 | 39 |
myeloid leukemia | 5.55e-09 | 31 |
lymphoma | 1.95e-08 | 10 |
squamous cell carcinoma | 2.28e-07 | 14 |