FFCP PHASE1:Hg19::chr13:114780821..114780833,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:114780821..114780833,- | |||
|id=chr13:114780821..114780833,- | |||
|ontology_enrichment_celltype=CL:0000136!7.44e-15!15;CL:0002150!4.16e-12!3;CL:0000861!4.16e-12!3;CL:0001014!1.44e-08!2;CL:0001016!1.44e-08!2;CL:1000415!3.50e-08!2;CL:0002617!5.21e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.11e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.22e-10,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.27e-18;29 | |||
|ontology_enrichment_disease=DOID:305!3.68e-17!106;DOID:0050687!4.51e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.03e-15,106;DOID:0050687,5.53e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.83e-34!9;UBERON:0001557!2.12e-18!19;UBERON:0008947!9.77e-12!38;UBERON:0003258!9.77e-12!38;UBERON:0000072!7.62e-11!46;UBERON:0000065!4.93e-09!53;UBERON:0002294!1.74e-08!7;UBERON:0001173!1.74e-08!7;UBERON:0004912!1.74e-08!7;UBERON:0000077!3.03e-07!130;UBERON:0001004!5.51e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.20e-61;9!UBERON:0001557;3.20e-61;9!UBERON:0000072;1.24e-13;37!UBERON:0000065;2.72e-11;44!UBERON:0000997;8.99e-10;1!UBERON:0005056;8.99e-10;1!UBERON:0004176;8.99e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.85e-61,9;UBERON:0001557,1.45e-28,19;UBERON:0008947,8.57e-14,38;UBERON:0003258,8.57e-14,38;UBERON:0000072,5.90e-11,47;UBERON:0000997,9.82e-10,1;UBERON:0005056,9.82e-10,1;UBERON:0000065,2.11e-09,54;UBERON:0001041,7.52e-07,87 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31259040111563,5.05754070234305,2.6511213287183,3.86028904563379,4.57546832594053,0.71181185733329,3.91010793664477,4.51309369788296,6.15595451114225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,1.07412704805365,0,0.197286811273867,0,0,0,0,0,0,0,4.34999745260876,0.341380344856499,0,0.945550727071745,0,0,0,0,0,0,0,0,0,4.03072315020264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07791637155815,0,0,0,1.45134496933628,1.0232504392066,2.05288642633023,0,0,0.225980740780532,0,0,0,0.391102765469606,0.320635281006135,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,6.96421759102155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44017803369474,8.5234563967718,3.36980134439808,5.57383472206668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.353909170043221,0,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96409332466223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.190941474834495,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr13:114780821..114780833,- | |||
}} |
Revision as of 18:51, 11 January 2014
Short description: | p@chr13:114780821..114780833, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114780821..114780833, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.22e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.85e-61 | 9 |
upper respiratory tract | 1.45e-28 | 19 |
respiratory primordium | 8.57e-14 | 38 |
endoderm of foregut | 8.57e-14 | 38 |
segment of respiratory tract | 5.90e-11 | 47 |
mammalian vulva | 9.82e-10 | 1 |
external female genitalia | 9.82e-10 | 1 |
respiratory tract | 2.11e-09 | 54 |
foregut | 7.52e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.03e-15 | 106 |
cell type cancer | 5.53e-11 | 143 |