FFCP PHASE1:Hg19::chr13:102104952..102104959,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6164 | |||
|TSSclassifier=strong | |||
|UniProt=O95965,F5GZX0 | |||
|association_with_transcript=-6bp_to_ENST00000376180,ENST00000478675,ENST00000537118,NM_004791,uc001vpb.2,uc001vpc.3,uc010agb.2_5end | |||
|coexpression_cluster_id=C698 | |||
|description=CAGE_peak_6_at_ITGBL1_5end | |||
|id=chr13:102104952..102104959,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.63e-34!180;CL:0000057!3.84e-31!75;CL:0000048!2.19e-12!430;CL:0002620!4.20e-12!23;CL:0000723!5.92e-12!436;CL:0000034!5.59e-11!444;CL:0002334!2.22e-10!12;CL:0000680!5.53e-10!57;CL:0000056!5.53e-10!57;CL:0000355!5.53e-10!57;CL:0000187!3.51e-08!54;CL:0000192!6.92e-08!42;CL:0000514!6.92e-08!42;CL:0002371!1.10e-07!591;CL:0002320!1.28e-07!365;CL:0000183!2.58e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.49e-14;23!CL:0002334;5.15e-11;12!CL:0000057;2.41e-10;73!CL:0002595;9.86e-10;5!CL:1000306;8.04e-09;4!CL:0002547;8.04e-09;4!CL:0000136;3.28e-08;13!CL:0002615;3.85e-08;3!CL:0002580;7.36e-08;3!CL:0002579;1.25e-07;3!CL:0000515;2.21e-07;3!CL:0002320;4.97e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.88e-30,76;CL:0002620,2.42e-13,23;CL:0000048,1.88e-12,427;CL:0000723,5.29e-12,433;CL:0000034,2.00e-11,441;CL:0002334,4.20e-11,12;CL:0002595,6.74e-10,5;CL:0000134,1.96e-09,354;CL:0002320,6.08e-09,361;CL:1000306,7.32e-09,4;CL:0002547,7.32e-09,4;CL:0002615,3.84e-08,3;CL:0002580,7.34e-08,3;CL:0002579,1.11e-07,3;CL:0000219,3.06e-07,386;CL:0000136,6.34e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.65e-10;5!DOID:450;7.65e-10;5!DOID:66;7.65e-10;5!DOID:423;7.65e-10;5!DOID:0080000;7.65e-10;5!DOID:11722;7.65e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.37e-09,5;DOID:450,2.37e-09,5;DOID:66,2.37e-09,5;DOID:423,2.37e-09,5;DOID:0080000,2.37e-09,5;DOID:11722,2.37e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.85e-15!83;UBERON:0002329!1.85e-15!83;UBERON:0003077!1.85e-15!83;UBERON:0003059!1.85e-15!83;UBERON:0007282!1.85e-15!83;UBERON:0009618!1.85e-15!83;UBERON:0007285!1.85e-15!83;UBERON:0003102!1.52e-12!95;UBERON:0000486!1.09e-11!82;UBERON:0004290!1.40e-11!70;UBERON:0001134!2.16e-09!61;UBERON:0002036!2.16e-09!61;UBERON:0003082!2.16e-09!61;UBERON:0004573!4.86e-09!33;UBERON:0004571!4.86e-09!33;UBERON:0000475!5.70e-09!365;UBERON:0002199!7.25e-09!45;UBERON:0002416!7.25e-09!45;UBERON:0002385!9.39e-09!63;UBERON:0001015!9.39e-09!63;UBERON:0000383!9.39e-09!63;UBERON:0002097!3.32e-08!40;UBERON:0005256!4.10e-08!143;UBERON:0002384!4.61e-08!375;UBERON:0003688!9.76e-08!6;UBERON:0002358!9.76e-08!6;UBERON:0003684!9.76e-08!6;UBERON:0001178!9.76e-08!6;UBERON:0002100!1.56e-07!216;UBERON:0002049!5.69e-07!79;UBERON:0007798!5.69e-07!79;UBERON:0001637!6.75e-07!42;UBERON:0003509!6.75e-07!42;UBERON:0004572!6.75e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.28e-14;6!UBERON:0002358;4.28e-14;6!UBERON:0003684;4.28e-14;6!UBERON:0001178;4.28e-14;6!UBERON:0003834;9.86e-10;5!UBERON:0001533;9.86e-10;5!UBERON:0004457;4.68e-09;9!UBERON:0000042;4.68e-09;9!UBERON:0004797;8.04e-09;4!UBERON:0000415;8.04e-09;4!UBERON:0007240;8.04e-09;4!UBERON:0005742;8.04e-09;4!UBERON:0005734;8.04e-09;4!UBERON:0004664;8.04e-09;4!UBERON:0004663;8.04e-09;4!UBERON:0004573;1.41e-08;33!UBERON:0004571;1.41e-08;33!UBERON:0002097;2.78e-08;41!UBERON:0002384;1.87e-07;198!UBERON:0002199;5.74e-07;46!UBERON:0002416;5.74e-07;46!UBERON:0003513;7.77e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.81e-14,6;UBERON:0002358,3.81e-14,6;UBERON:0003684,3.81e-14,6;UBERON:0001178,3.81e-14,6;UBERON:0004573,3.22e-10,33;UBERON:0004571,3.22e-10,33;UBERON:0003834,6.74e-10,5;UBERON:0001533,6.74e-10,5;UBERON:0002384,6.76e-10,371;UBERON:0002097,1.40e-09,41;UBERON:0002199,2.30e-09,46;UBERON:0002416,2.30e-09,46;UBERON:0003102,7.03e-09,99;UBERON:0000415,7.32e-09,4;UBERON:0007240,7.32e-09,4;UBERON:0005742,7.32e-09,4;UBERON:0005734,7.32e-09,4;UBERON:0004664,7.32e-09,4;UBERON:0004663,7.32e-09,4;UBERON:0001637,2.93e-07,42;UBERON:0003509,2.93e-07,42;UBERON:0004572,2.93e-07,42;UBERON:0003513,5.98e-07,7 | |||
|phase1_expression=8.53888382571616,7.27941781229343,10.8534891153898,28.0205235388765,16.9845215882369,19.1914475302081,5.06599756336621,0,0,0,0,0,0,0.866364470720326,0.994192127183747,0,1.20538905604795,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0.50133791063589,2.17269778441236,3.1811437882044,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0,0,0,0,0,0,0,0,7.9515512271251,2.15271869829786,2.78059279707759,9.75244510545967,1.41867352879343,0.560677600142307,0,0,0,0.269421344139376,0.490385709340376,0.454072282934794,1.72852777344,0,0.312160076830321,0,0.149448680551801,0.352303495931295,0.809364721840658,0.561803226808994,1.22492502752936,0.491337269247072,0.619954687054593,2.37600571456411,1.23633464639278,0.910161361938026,0.718618141816238,0.336672227908132,0.750711119231785,1.93944880838928,1.31693286264251,4.29082914118628,2.25357088359895,0.226864366320042,2.33206526395521,1.06778694409284,1.05965950579781,3.30100205692843,1.03052529238439,3.09168648054755,2.23340227597908,2.36286865137773,2.63079913935236,1.26216887122057,1.10459878370759,0.484938170456436,4.9701342952326,1.10827308050404,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,3.11980435583874,0,0,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0,0.4400297149257,3.61960804121778,0,0.845302752556,1.06375246633948,0,0.771622122786426,0,0.799266537048298,0.285955987316295,0,0.823240336780769,0.65147236858747,0.710783897485092,0,0,0,0,0,0,0,1.19812427745791,0,0,4.48822050669496,4.72595541865882,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,7.48695101510906,4.46072471992904,7.254311091561,14.5255354590964,4.8151375956435,6.82222512167955,2.0694614258501,2.65690239414175,0.921845842708516,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,5.95458738765064,16.7273550883988,5.89386198309454,2.81906128362542,15.3512174720011,6.27330292460069,13.3576259800492,0.308419387605311,0.710246901252508,0.164254312027618,1.55776328755086,0.116210378459959,0,0,0,1.49258782613989,0.728364672026868,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0.767518373630648,0.275673144969061,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0.929691098594572,20.4628025439916,0,0.616067160352178,1.06461206063404,0.869932992075073,0.18532421910392,3.43499728180779,0,1.58189712359363,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,1.58510321173008,0,0,1.94970791705028,2.11300293513511,0.272999822815972,0.565621727814851,0,1.10273068709225,1.99031692572366,2.19225442626881,0,0.655894752046633,0,0,0,0,0.589494246078727,0,0,0.633322905892992,0.987884678879706,1.13841952129715,0.699869440489966,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.593929361665277,0.307160702099232,0,0,0,0,0,1.9924798825107,0,0,0,0,5.90975216557434,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,1.32691817219825,0,0,0,0,0,1.19472429772959,0,0.277349346026277,0,0,0,0,0.343972064943233,0,0,0,0.581934098930517,0,0.451961481561065,0.548167698587004,0,0,0,0,0.213452994739353,0,0,0.572682980829578,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,3.60299883542404,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,1.017074150619,1.08599920350743,0,0.653174720218818,0,0,1.5334921960688,0,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.298509605773748,0.934853239388898,0,0.189403005275089,1.0062716070103,1.77962244319307,0.228840068396924,0.604923695052956,1.70980920641059,0,0.159296767163702,0,1.39736661188633,1.65882483136342,2.92425886013794,0.521745061811734,0.300515217994437,0.761610424337591,0.406870733204662,0,0,0,1.19428766609585,1.60011105865261,0.686791410365586,0.336749488765919,3.78554694685953,0.192619830407303,0,0,0.906823702049089,0.694567422971502,0,0.71635536432595,1.85280868296583,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.058027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| |||
|short_description=p6@ITGBL1 | |||
}} |
Revision as of 18:30, 11 January 2014
Short description: | p6@ITGBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ITGBL1_5end |
Coexpression cluster: | C698_Smooth_Adipocyte_Fibroblast_Preadipocyte_Olfactory_Ewing_basal |
Association with transcript: | -6bp_to_ENST00000376180, ENST00000478675, ENST00000537118, NM_004791, uc001vpb.2, uc001vpc.3, uc010agb.2_5end |
EntrezGene: | ITGBL1 |
HGNC: | 6164 |
UniProt: | O95965F5GZX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.88e-30 | 76 |
skin fibroblast | 2.42e-13 | 23 |
multi fate stem cell | 1.88e-12 | 427 |
somatic stem cell | 5.29e-12 | 433 |
stem cell | 2.00e-11 | 441 |
preadipocyte | 4.20e-11 | 12 |
smooth muscle cell of the subclavian artery | 6.74e-10 | 5 |
mesenchymal cell | 1.96e-09 | 354 |
connective tissue cell | 6.08e-09 | 361 |
fibroblast of tunica adventitia of artery | 7.32e-09 | 4 |
fibroblast of the aortic adventitia | 7.32e-09 | 4 |
adipocyte of omentum tissue | 3.84e-08 | 3 |
preadipocyte of the breast | 7.34e-08 | 3 |
omentum preadipocyte | 1.11e-07 | 3 |
motile cell | 3.06e-07 | 386 |
fat cell | 6.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.81e-14 | 6 |
peritoneum | 3.81e-14 | 6 |
abdominal cavity | 3.81e-14 | 6 |
visceral peritoneum | 3.81e-14 | 6 |
systemic artery | 3.22e-10 | 33 |
systemic arterial system | 3.22e-10 | 33 |
thoracic segment blood vessel | 6.74e-10 | 5 |
subclavian artery | 6.74e-10 | 5 |
connective tissue | 6.76e-10 | 371 |
skin of body | 1.40e-09 | 41 |
integument | 2.30e-09 | 46 |
integumental system | 2.30e-09 | 46 |
surface structure | 7.03e-09 | 99 |
artery wall | 7.32e-09 | 4 |
tunica adventitia of artery | 7.32e-09 | 4 |
adventitia | 7.32e-09 | 4 |
tunica adventitia of blood vessel | 7.32e-09 | 4 |
aorta tunica adventitia | 7.32e-09 | 4 |
aorta wall | 7.32e-09 | 4 |
artery | 2.93e-07 | 42 |
arterial blood vessel | 2.93e-07 | 42 |
arterial system | 2.93e-07 | 42 |
trunk blood vessel | 5.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.37e-09 | 5 |
myotonic disease | 2.37e-09 | 5 |
muscle tissue disease | 2.37e-09 | 5 |
myopathy | 2.37e-09 | 5 |
muscular disease | 2.37e-09 | 5 |
myotonic dystrophy | 2.37e-09 | 5 |