FFCP PHASE1:Hg19::chr12:95942563..95942595,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84101 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20064 | |||
|TSSclassifier=strong | |||
|UniProt=F8VVD6,F8VRW0 | |||
|association_with_transcript=0bp_to_ENST00000549639,ENST00000551837_5end | |||
|description=CAGE_peak_1_at_USP44_5end | |||
|id=chr12:95942563..95942595,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.36e-08;5!CL:0000236;6.69e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.51e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.75e-07;10!UBERON:0005564;8.75e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.69e-23!115;UBERON:0000073!7.33e-12!94;UBERON:0001016!7.33e-12!94;UBERON:0005743!9.47e-12!86;UBERON:0001049!1.43e-11!57;UBERON:0005068!1.43e-11!57;UBERON:0006241!1.43e-11!57;UBERON:0007135!1.43e-11!57;UBERON:0002346!3.96e-11!90;UBERON:0001017!8.22e-11!82;UBERON:0003075!2.69e-10!86;UBERON:0007284!2.69e-10!86;UBERON:0002616!5.59e-10!59;UBERON:0002780!9.28e-10!41;UBERON:0001890!9.28e-10!41;UBERON:0006240!9.28e-10!41;UBERON:0003080!3.24e-09!42;UBERON:0000955!9.86e-09!69;UBERON:0006238!9.86e-09!69;UBERON:0001893!1.21e-07!34;UBERON:0002791!2.51e-07!33;UBERON:0002020!2.94e-07!34;UBERON:0003528!2.94e-07!34;UBERON:0001869!6.68e-07!32;UBERON:0003056!7.90e-07!61;UBERON:0000153!8.63e-07!129;UBERON:0007811!8.63e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;1.74e-09;22!UBERON:0000079;1.74e-09;22!UBERON:0000473;4.87e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.10e-12,114;UBERON:0003101,6.80e-10,22;UBERON:0000079,6.80e-10,22;UBERON:0000073,2.09e-09,53;UBERON:0002616,2.09e-09,53;UBERON:0001049,1.65e-08,56;UBERON:0005068,1.65e-08,56;UBERON:0006241,1.65e-08,56;UBERON:0007135,1.65e-08,56;UBERON:0002780,1.94e-08,41;UBERON:0001890,1.94e-08,41;UBERON:0003080,1.94e-08,41;UBERON:0006240,1.94e-08,41;UBERON:0001016,4.24e-08,89;UBERON:0001017,5.86e-08,81;UBERON:0000473,2.34e-07,8;UBERON:0011216,3.57e-07,223;UBERON:0000955,6.43e-07,68;UBERON:0006238,6.43e-07,68 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0.246242116153576,0,0,3.14859585844162,1.77936752594749,1.75759695432724,0,0.0821005894499457,0,0,0.383829398097213,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0.22465726229299,0,0,0,0,0,3.51992488922645,3.82297027883492,2.66852776159066,2.98711155796555,2.00197993518006,1.14950487990897,3.30522436392431,3.81621501814146,0.569212969109448,0,0.764546456250458,0,1.12101712596307,0,2.75393678159366,1.17903228824749,0.822405995998037,0.334372990781356,1.62961133316795,0.946895611469467,1.94826728407911,0.222820913770347,0.294605907474837,0,0,0,0,0.657751618414705,1.10540007114339,1.73881851441031,4.59688345802387,2.94294910898684,5.22677619024884,0.679856056185397,1.53288197440768,0.68725489096526,0.506039384039006,0.95569624297229,1.30216690771284,2.85135613334512,2.25862678616659,1.27986611154418,1.24930726552346,0.236777252044017,0,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.567208902984407,0,0.263504357079378,1.17881167947941,0,0,0,0.174129737299267,0,0.238490624305342,0.571994910780128,0.371457501329565,0.596287222100115,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0.760272105718513,0.732186172644509,0,0.81014194788176,1.3394959242612,0.898117490504679,0.337834441449967,0,0,0.916008719652036,0,0,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.413303124703062,0,0.247266929278557,0,0,0,0,1.38532057742091,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0,1.2931684545505,0,0,0,0,0,0,19.6377666868649,17.3613996501146,17.6614793161668,7.25627385107593,10.0928340350251,11.6792754904266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0.343135620597051,0,0,0,0.277765335475589,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0.576479813667846,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,1.32969058292435,1.04007436911366,0,0,0,3.28849385413739,0,0,0,3.19852753868291,0,0,0,0.399891964728228,0,0,0,0,0,1.42636905040718,0,0.410952645100767,0,0,0.591092280605782,0,0.385029108839245,0.76228387266739,2.60279707715243,0,0,1.27587750330633,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0.178428988797162,0,1.40569697991256,0.300946099727719,0,0,0,0,0.695068915744663,0,0,0.82707210449155,1.07857100409308,0.533637789017222,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0.184161977871793,8.15182581968708,2.54927635209404,4.85160335349869,1.35359883872224,1.77135275340154,0,0,2.95544560900052,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0.223874754722178,0.657779629937804,0,0.769350375349168,0.328014645699706,0.976135183992909,0.721287081534056,1.19040304263846,1.98022799809411,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0,0.10115778085555,0.929691098594572,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,1.14378116354295,0,0.42793898803392,0.318203247925937,0,0.359744915166629,1.09814811894422,0.706874414074119,0.202182481573316,0,0.421258456238981,0,0,0,3.8219975194236,1.41405431953713,1.13008116620243,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0.459446800413919,0.507447609232169,0,0.569647187174163,0.238231775457789,1.23408681925858,0.648473311192717,0.540031437238115,0,0.320472213382419,0.962479855263359,0.245040215981032,0.185803175125719,0,5.26449640778264,4.46393563640703,0.399158742865633,0,0,0,2.24637742490767,0,0.156679895773023,2.50634477090067,1.01575066680962,0,0.605399121573143,0,0,0,0,0,0,0,9.84699191581699,5.67956924799565,0,4.22961015263549,0,1.02555725490326,5.58258400047762,0,0,0,0,0,0,0.844016498463076,0,0,0.211125408127993,0.597743964753209,1.10513566212459,1.0077309914171,0.920418142519393,0,0,0,0,0,1.08507746200627,2.3948309234694,0,0.969332746095218,0.927680981618513,0,0,0,0,1.82069517256799,2.03402920234213,0.945550727071745,0,0.583209226766509,0.347249989866585,0,0.964771509003264,7.62908681585416,8.29344449484185,3.54657142744257,0.219385397153973,0,0,1.30815439456455,0,0.23056390438806,0,2.7161842980502,0,2.01514705484097,0,3.06579894587209,0,0.997270091400938,0.676786981851542,1.76456280885966,1.34257269580674,0.189753732724185,3.01979500062719,1.68798451622422,0.489698424477443,0,0,0,1.32686346755009,1.22206028986725,0,0,0,1.34802265961354,0,1.63985112007737,6.02100804411698,0,0,1.57833761139756,1.20990716048664,0.30607276163049,0.063186579628488,1.65355761355942,2.28114021073944,0.664653872707185,0.661983911750998,1.56966459203613,3.58417289318877,2.27687636823834,0,5.90103110339445,0,0,0.873633341210151,0,0,0,0,0.872901148395775,7.41351464208602,0.225980740780532,0,0,1.58276989889697,1.75996244461323,0,0.640358984218058,0,0,0,0.171594997861965,0,0.99402028452346,0.235694034616795,0,0,0,0,1.20084057741958,1.09524303113594,0,2.14882720709979,0,0.837847203816763,1.60412296808179,1.43574604915363,0.399358000997982,0,0.446342914883745,0.201550417460179,0.360299883542404,0,0,0,0.13480708770837,6.10250385391442,0,0,0.681017030557878,7.71615112632092,11.9659309839593,21.1874572394884,0,0,1.03274246318642,0,0.788057072991982,0.262272940674991,0.950403028674658,0.179287339332845,0,1.42939065274673,0.662091970365432,0,0,0,0,1.19730191562487,12.5601556746489,0.170388021785422,0.453248366080503,0.293104467356165,0,0.387848869084652,0.79339561045614,0.171086837884329,0.704815022316672,3.41719720216623,3.61569901729232,2.48543433208317,0.992332043623902,0,0.730755590285376,0,0,0,0,0.327872630709804,1.25643277000187,3.54427271986794,1.34228891392159,1.502291168478,1.14681839138014,1.77486482458964,0.372578417648301,12.7280744141332,0.124980407962107,0,0.285465333544967,0,1.40500471742064,0,0,0.233713309847224,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0.450772826991655,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0.214441591374926,2.08795433572169,0.453411851024545,0,0.489473409012935,0,1.23520578864389,0,0,0,0,0,0,0.607719912354764,0.691292180758654,0.779441235357554,0.664324201566815,0.654261577023377,1.31043939538565,0.245772908753719,0,0,1.06691729694141,0,0.567515953566836,0.368211900503681,0,0,2.94157053998399,0,1.88719130227076,0.873677105536111,3.73411565898855,0.850299680406731,0.371807292777007,1.11728983594649,0,0,1.60114149657094,0,3.062454773532,0.963438376446893,0,1.11743701340006,1.02558182120378,0.756215088665154,0.276629009856872,1.13032951942296,0,0,2.59533391365029,0,0,0,0,0.596748666348824,1.35378591028663,0,2.34454203369928,0,0,0,1.14813893851271,0.781078098613847,1.65349437200947,1.52197944465376,0,1.64477330057155,0,0.351742488719241,0,1.60710550763486,2.35398605553177,3.03482802118316,3.41493287026946,0.0887023701626388,0,0,0.543757863814654,0.789273282754189,4.60955979447476,0,1.49136876415977,0.471346769748006,0,0,0,0,1.92986669276972,0,3.37100133567563,0.173858272302579,0.801711364730253,0.414432328326074,0,0,1.29068207646083,0.118332000730565,0.170426809518315,1.69354820076372,0,0.62041277132864,0.955538938977433,1.56597604516909,0,0,0,0.307988420568741,0,0,0.233939463462106,0,0.475680363110274,4.40489719951944,1.42922671769058,1.81155412280008,0.385870790539723,0.655678681511872,0,0.490296643507811,0,0.588925401344836,0.891139200981258,0.4226557275834,0,1.31577485171795,0.45120521581504,0,0,0,0,0,1.83491713361816,1.43339583151451,0.473314686579554,0.679914901909147,0.872701380680755,0.5290268405154,0,0,0,0,4.47988845051152,0.380095503034311,4.69148616813116,5.34434810531121,1.37842349302267,4.76344324655513,2.27336094654718,1.87574891109325,0,1.13776295448085,1.0661699095049,0.23806443146374,0.710478008196067,1.42771842880473,0,1.40023748211963,0.606351566874658,0.217716747896961,0,0.875576689189638,0.932388670104793,0.665320713092027,0,5.97673136915207,0,0.898252021065869,0,2.81155321620593,0,1.99727032255654,1.81146414231924,0 | |||
|short_description=p1@USP44 | |||
}} |
Revision as of 15:18, 11 January 2014
Short description: | p1@USP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP44_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000549639, ENST00000551837_5end |
EntrezGene: | USP44 |
HGNC: | 20064 |
UniProt: | F8VVD6F8VRW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.51e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.10e-12 | 114 |
male organism | 6.80e-10 | 22 |
male reproductive system | 6.80e-10 | 22 |
regional part of nervous system | 2.09e-09 | 53 |
regional part of brain | 2.09e-09 | 53 |
neural tube | 1.65e-08 | 56 |
neural rod | 1.65e-08 | 56 |
future spinal cord | 1.65e-08 | 56 |
neural keel | 1.65e-08 | 56 |
regional part of forebrain | 1.94e-08 | 41 |
forebrain | 1.94e-08 | 41 |
anterior neural tube | 1.94e-08 | 41 |
future forebrain | 1.94e-08 | 41 |
nervous system | 4.24e-08 | 89 |
central nervous system | 5.86e-08 | 81 |
testis | 2.34e-07 | 8 |
organ system subdivision | 3.57e-07 | 223 |
brain | 6.43e-07 | 68 |
future brain | 6.43e-07 | 68 |