FFCP PHASE1:Hg19::chr12:6955723..6955744,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr12:6955723..6955744,+ | |||
|id=chr12:6955723..6955744,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000243;1.25e-07;15!CL:0000125;1.25e-07;15!CL:0000095;6.38e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.25e-07,15;CL:0000125,1.25e-07,15;CL:0000030,1.25e-07,15;CL:0000339,1.25e-07,15;CL:0000095,6.38e-07,17;CL:0000123,6.38e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.83e-11;10!UBERON:0003056;8.17e-11;3!CL:0000339;1.25e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;2.03e-10;11!DOID:5409;2.43e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.03e-10,11;DOID:5409,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.07e-13!94;UBERON:0001016!1.07e-13!94;UBERON:0001049!4.30e-12!57;UBERON:0005068!4.30e-12!57;UBERON:0006241!4.30e-12!57;UBERON:0007135!4.30e-12!57;UBERON:0005743!6.41e-12!86;UBERON:0001017!9.85e-12!82;UBERON:0000955!1.17e-10!69;UBERON:0006238!1.17e-10!69;UBERON:0002346!1.87e-10!90;UBERON:0003075!2.25e-09!86;UBERON:0007284!2.25e-09!86;UBERON:0002616!3.89e-09!59;UBERON:0002780!1.01e-08!41;UBERON:0001890!1.01e-08!41;UBERON:0006240!1.01e-08!41;UBERON:0003080!2.02e-08!42;UBERON:0002020!3.96e-08!34;UBERON:0003528!3.96e-08!34;UBERON:0000924!3.38e-07!173;UBERON:0006601!3.38e-07!173;UBERON:0003056!3.44e-07!61;UBERON:0001950!7.93e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-57;2!UBERON:0002757;1.13e-57;2!UBERON:0010134;1.13e-57;2!UBERON:0005408;1.13e-57;2!UBERON:0001899;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0002784;1.78e-29;4!UBERON:0001894;2.46e-17;7!UBERON:0000955;2.98e-07;68!UBERON:0000966;5.38e-07;5!UBERON:0005388;5.38e-07;5!UBERON:0001802;5.38e-07;5!UBERON:0001872;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-57,2;UBERON:0002757,1.13e-57,2;UBERON:0010134,1.13e-57,2;UBERON:0005408,1.13e-57,2;UBERON:0001899,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0002784,1.78e-29,4;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0000955,1.85e-10,68;UBERON:0006238,1.85e-10,68;UBERON:0001017,7.26e-09,81;UBERON:0001016,5.05e-08,89;UBERON:0003056,8.15e-08,61;UBERON:0001872,6.77e-07,5;UBERON:0002780,8.88e-07,41;UBERON:0001890,8.88e-07,41;UBERON:0003080,8.88e-07,41;UBERON:0006240,8.88e-07,41 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0.600182192168805,0,0.515281080091258,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0.264768380074501,2.25980740780532,0.137041924646751,0.19871461170299,0,0,0,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0,1.10678907948985,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0,0.637724760305049,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0.319267718114302,0,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,1.09394961803644,0,0,0,0,5.35701835878287,21.1858744997859,0.606965604236632,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.571812353413251,4.26636751678362,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64910775118144,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0.760191006068622,0,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:6955723..6955744,+ | |||
}} |
Revision as of 11:47, 11 January 2014
Short description: | p@chr12:6955723..6955744, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6955723..6955744, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.25e-07 | 15 |
glial cell | 1.25e-07 | 15 |
glioblast | 1.25e-07 | 15 |
glioblast (sensu Vertebrata) | 1.25e-07 | 15 |
neuron associated cell | 6.38e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.38e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-57 | 2 |
regional part of epithalamus | 1.13e-57 | 2 |
secretory circumventricular organ | 1.13e-57 | 2 |
circumventricular organ | 1.13e-57 | 2 |
epithalamus | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
regional part of diencephalon | 1.78e-29 | 4 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
brain | 1.85e-10 | 68 |
future brain | 1.85e-10 | 68 |
central nervous system | 7.26e-09 | 81 |
nervous system | 5.05e-08 | 89 |
pre-chordal neural plate | 8.15e-08 | 61 |
parietal lobe | 6.77e-07 | 5 |
regional part of forebrain | 8.88e-07 | 41 |
forebrain | 8.88e-07 | 41 |
anterior neural tube | 8.88e-07 | 41 |
future forebrain | 8.88e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.03e-10 | 11 |
lung small cell carcinoma | 2.26e-08 | 4 |