FFCP PHASE1:Hg19::chr12:55378964..55378978,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9840 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29109 | |||
|TSSclassifier=not | |||
|UniProt=E9PIT9 | |||
|association_with_transcript=-434bp_to_ENST00000533607_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_5_at_KIAA0748_5end | |||
|id=chr12:55378964..55378978,- | |||
|ontology_enrichment_celltype=CL:0000791!4.20e-33!18;CL:0000789!4.20e-33!18;CL:0002420!4.20e-33!18;CL:0002419!4.20e-33!18;CL:0000790!4.20e-33!18;CL:0000738!7.00e-29!140;CL:0000084!4.45e-28!25;CL:0000827!4.45e-28!25;CL:0002031!2.25e-23!124;CL:0000037!3.55e-23!172;CL:0000566!3.55e-23!172;CL:0002087!9.87e-23!119;CL:0000838!1.72e-22!52;CL:0000542!6.32e-22!53;CL:0000051!6.32e-22!53;CL:0000625!1.74e-21!11;CL:0000988!3.92e-21!182;CL:0002032!7.61e-20!165;CL:0000837!7.61e-20!165;CL:0000624!1.38e-15!6;CL:0000898!1.57e-08!3;CL:0000623!1.86e-08!3;CL:0000825!1.86e-08!3;CL:0000842!4.30e-08!3;CL:0000766!1.04e-07!76;CL:0000767!2.07e-07!3;CL:0000094!6.14e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.53e-57;18!CL:0000789;1.53e-57;18!CL:0002419;1.53e-57;18!CL:0000084;2.50e-40;25!CL:0000625;9.75e-37;11!CL:0000624;4.05e-26;6!CL:0000898;9.96e-14;3!CL:0000623;1.21e-13;3!CL:0000226;4.62e-13;3!CL:0000842;4.62e-13;3!CL:0000542;7.11e-13;53!CL:0000815;1.46e-09;2!CL:0000792;1.46e-09;2!CL:0002677;1.46e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.12e-57,18;CL:0000789,1.12e-57,18;CL:0002420,1.12e-57,18;CL:0002419,1.12e-57,18;CL:0000790,1.12e-57,18;CL:0000084,2.00e-40,25;CL:0000827,2.00e-40,25;CL:0000625,7.34e-37,11;CL:0000624,3.89e-26,6;CL:0000838,2.78e-25,52;CL:0000542,1.02e-24,53;CL:0000051,1.02e-24,53;CL:0000738,7.96e-16,136;CL:0002087,3.41e-15,115;CL:0000898,9.15e-14,3;CL:0000623,1.23e-13,3;CL:0000825,1.23e-13,3;CL:0000226,5.34e-13,3;CL:0000842,5.34e-13,3;CL:0000037,1.25e-11,168;CL:0000988,9.99e-11,177;CL:0002031,1.97e-10,120;CL:0000815,1.34e-09,2;CL:0000792,1.34e-09,2;CL:0002677,1.34e-09,2;CL:0002032,3.38e-09,161;CL:0000837,3.38e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.53e-57;18!CL:0000051;7.11e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.21e-17!15;UBERON:0000179!6.21e-17!15;UBERON:0000463!6.21e-17!15;UBERON:0002193!2.39e-14!112;UBERON:0002390!2.82e-14!102;UBERON:0003061!2.82e-14!102;UBERON:0004177!4.53e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.31e-24;15!UBERON:0000179;1.31e-24;15!UBERON:0000463;1.31e-24;15!UBERON:0002390;1.90e-14;32!UBERON:0002370;3.84e-09;2!UBERON:0005058;3.84e-09;2!UBERON:0009113;3.84e-09;2!UBERON:0002193;2.05e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.42e-24,15;UBERON:0000179,1.42e-24,15;UBERON:0000463,1.42e-24,15;UBERON:0002370,4.56e-10,4;UBERON:0005058,4.56e-10,4;UBERON:0009113,4.56e-10,4;UBERON:0003295,4.56e-10,4;UBERON:0005562,4.56e-10,4;UBERON:0003351,7.61e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.53531759238885,0.464448369948228,0,0,0,0,0,0,0.553995408531877,1.80490002723128,1.30206522429511,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0.512321413058201,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0.641858054152187,0,0,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,1.12101712596307,0,23.8018821837738,9.03924754323079,7.81285696198135,1.5046784585161,9.77766799900771,7.101717086021,5.84480185223734,0.334231370655521,3.82987679717288,5.53834736459053,4.06205795647523,0.25618263945135,0.390178042679635,0.986627427622057,1.93445012450094,2.02862160014537,20.1669725900402,16.0524496853828,8.36284190439814,0.793165398882963,11.1133943144557,13.0578429283399,12.3979649089556,7.96413535810242,3.90650072313851,4.75226022224187,6.625305239422,5.63141089079441,0,5.6826540490564,4.10563998460523,7.86266298576456,5.61624411145365,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522389211897802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47232268868287,5.17506179662842,5.77543663258868,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58273670531796,3.66714141391649,3.30855429190677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,0.764637207142375,1.70894156152249,2.85878130549347,2.05681136543097,2.59389324477087,1.08006287447623,1.58625035258854,0,0,0,0,0,0.213425530045242,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35862331147232,3.47618400056804,0,0,0,0,0,0.942928742204225,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@KIAA0748 | |||
}} |
Revision as of 13:53, 11 January 2014
Short description: | p5@KIAA0748 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KIAA0748_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -434bp_to_ENST00000533607_5end |
EntrezGene: | KIAA0748 |
HGNC: | 29109 |
UniProt: | E9PIT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.12e-57 | 18 |
alpha-beta T cell | 1.12e-57 | 18 |
immature T cell | 1.12e-57 | 18 |
mature T cell | 1.12e-57 | 18 |
immature alpha-beta T cell | 1.12e-57 | 18 |
T cell | 2.00e-40 | 25 |
pro-T cell | 2.00e-40 | 25 |
CD8-positive, alpha-beta T cell | 7.34e-37 | 11 |
CD4-positive, alpha-beta T cell | 3.89e-26 | 6 |
lymphoid lineage restricted progenitor cell | 2.78e-25 | 52 |
lymphocyte | 1.02e-24 | 53 |
common lymphoid progenitor | 1.02e-24 | 53 |
leukocyte | 7.96e-16 | 136 |
nongranular leukocyte | 3.41e-15 | 115 |
naive T cell | 9.15e-14 | 3 |
natural killer cell | 1.23e-13 | 3 |
pro-NK cell | 1.23e-13 | 3 |
single nucleate cell | 5.34e-13 | 3 |
mononuclear cell | 5.34e-13 | 3 |
hematopoietic stem cell | 1.25e-11 | 168 |
hematopoietic cell | 9.99e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.97e-10 | 120 |
regulatory T cell | 1.34e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.34e-09 | 2 |
naive regulatory T cell | 1.34e-09 | 2 |
hematopoietic oligopotent progenitor cell | 3.38e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.38e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.42e-24 | 15 |
haemolymphatic fluid | 1.42e-24 | 15 |
organism substance | 1.42e-24 | 15 |
thymus | 4.56e-10 | 4 |
hemolymphoid system gland | 4.56e-10 | 4 |
thymic region | 4.56e-10 | 4 |
pharyngeal gland | 4.56e-10 | 4 |
thymus primordium | 4.56e-10 | 4 |
pharyngeal epithelium | 7.61e-07 | 6 |