FFCP PHASE1:Hg19::chr12:52913604..52913643,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3852 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6442 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-203bp_to_ENST00000551013_5end | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_4_at_KRT5_5end | |||
|id=chr12:52913604..52913643,- | |||
|ontology_enrichment_celltype=CL:0002076!4.64e-31!43;CL:0000223!1.60e-20!59;CL:0002251!1.79e-18!21;CL:0000066!3.04e-18!254;CL:0002159!7.98e-18!13;CL:0002368!8.57e-18!13;CL:0000622!1.37e-12!5;CL:0000154!2.09e-10!6;CL:0000244!4.17e-10!4;CL:0000731!4.17e-10!4;CL:0002202!4.49e-10!9;CL:0002632!4.49e-10!9;CL:0000076!7.41e-10!62;CL:0002328!7.66e-09!3;CL:0000068!1.90e-08!3;CL:0000069!1.90e-08!3;CL:0000307!1.90e-08!3;CL:0000377!1.90e-08!3;CL:0002623!3.64e-08!3;CL:0002077!3.96e-08!33;CL:0002621!5.08e-08!3;CL:0002166!5.45e-08!3;CL:0000362!7.05e-08!8;CL:0000349!9.75e-08!3;CL:0002577!9.75e-08!3;CL:0000240!4.59e-07!6;CL:0000311!4.59e-07!6;CL:0000079!4.59e-07!6;CL:0000237!4.59e-07!6;CL:0000036!4.59e-07!6;CL:0000357!4.59e-07!6;CL:0000114!4.59e-07!6;CL:0000150!9.17e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.53e-25;42!CL:0002368;1.30e-23;13!CL:0002159;8.74e-22;14!CL:0000622;3.11e-16;5!CL:0002251;4.57e-14;20!CL:0000154;1.81e-13;6!CL:0002202;2.96e-13;9!CL:0002632;2.96e-13;9!CL:0000244;5.52e-13;4!CL:0000731;5.52e-13;4!CL:0002328;2.86e-11;3!CL:0000307;9.46e-11;3!CL:0002623;2.54e-10;3!CL:0002621;3.49e-10;3!CL:0002166;4.27e-10;3!CL:0002577;1.04e-09;3!CL:0002077;1.17e-09;34!CL:0000240;4.04e-09;6!CL:0000311;4.04e-09;6!CL:0000079;4.04e-09;6!CL:0000237;4.04e-09;6!CL:0000362;4.14e-09;9!CL:0000150;7.53e-09;9!CL:0000575;5.12e-08;2!CL:0002327;1.02e-07;4!CL:0000317;1.31e-07;2!CL:1000448;1.31e-07;2!CL:0002308;1.31e-07;2!CL:0002140;1.31e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.14e-32,42;CL:0002368,1.38e-23,13;CL:0000066,7.08e-23,253;CL:0002159,8.85e-22,14;CL:0000223,2.46e-21,58;CL:0000622,2.97e-16,5;CL:0002251,4.74e-14,20;CL:0000154,1.75e-13,6;CL:0002202,3.05e-13,9;CL:0002632,3.05e-13,9;CL:0000244,6.06e-13,4;CL:0000731,6.06e-13,4;CL:0002328,2.91e-11,3;CL:0002077,4.93e-11,34;CL:0000068,9.77e-11,3;CL:0000069,9.77e-11,3;CL:0000307,9.77e-11,3;CL:0000377,9.77e-11,3;CL:0002623,2.32e-10,3;CL:0002621,3.60e-10,3;CL:0002166,3.95e-10,3;CL:0000076,4.07e-10,63;CL:0002577,8.56e-10,3;CL:0000240,4.00e-09,6;CL:0000311,4.00e-09,6;CL:0000079,4.00e-09,6;CL:0000237,4.00e-09,6;CL:0000036,4.00e-09,6;CL:0000357,4.00e-09,6;CL:0000114,4.00e-09,6;CL:0000362,4.21e-09,9;CL:0000150,7.35e-09,9;CL:0000575,5.47e-08,2;CL:0002327,9.21e-08,4;CL:0000317,1.37e-07,2;CL:1000448,1.37e-07,2;CL:0002308,1.37e-07,2;CL:0002140,1.37e-07,2;CL:0002321,6.93e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000223;7.94e-12;58!CL:0000377;9.46e-11;3!CL:0000357;4.04e-09;6!CL:0000114;4.04e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!8.71e-17!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.67e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.28e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.36e-18!72;UBERON:0000166!6.79e-16!21;UBERON:0000161!8.01e-15!35;UBERON:0004119!1.18e-14!169;UBERON:0000925!1.18e-14!169;UBERON:0006595!1.18e-14!169;UBERON:0000165!4.20e-13!28;UBERON:0000930!4.20e-13!28;UBERON:0000974!1.87e-12!10;UBERON:0000365!7.83e-12!5;UBERON:0005631!2.49e-11!14;UBERON:0000158!2.49e-11!14;UBERON:0003729!2.71e-11!5;UBERON:0003102!6.87e-11!95;UBERON:0000065!7.33e-11!53;UBERON:0007196!3.51e-10!14;UBERON:0001558!3.51e-10!14;UBERON:0001444!8.18e-10!48;UBERON:0005910!8.74e-10!6;UBERON:0003343!3.86e-09!4;UBERON:0004785!3.86e-09!4;UBERON:0004815!7.66e-09!3;UBERON:0002031!7.66e-09!3;UBERON:0006562!1.46e-08!11;UBERON:0003126!2.10e-08!7;UBERON:0001005!2.10e-08!7;UBERON:0000344!3.79e-08!12;UBERON:0001949!5.08e-08!3;UBERON:0000305!1.51e-07!7;UBERON:0001723!2.36e-07!3;UBERON:0001033!2.36e-07!3;UBERON:0010056!2.36e-07!3;UBERON:0001007!2.46e-07!155;UBERON:0001555!2.46e-07!155;UBERON:0007026!2.46e-07!155;UBERON:0001042!3.62e-07!10;UBERON:0009145!3.62e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.64e-12;12!UBERON:0000165;2.50e-11;28!UBERON:0004815;2.86e-11;3!UBERON:0002031;2.86e-11;3!UBERON:0000365;2.16e-10;5!UBERON:0001949;3.49e-10;3!UBERON:0007196;5.68e-10;15!UBERON:0001558;5.68e-10;15!UBERON:0000161;2.06e-09;19!UBERON:0000166;2.06e-09;19!UBERON:0005910;1.16e-08;6!UBERON:0003729;3.36e-08;13!UBERON:0001911;1.02e-07;4!UBERON:0001708;1.15e-07;4!UBERON:0008895;1.15e-07;4!UBERON:0002419;1.31e-07;2!UBERON:0007771;1.31e-07;2!UBERON:0003297;1.31e-07;2!UBERON:0001821;1.31e-07;2!UBERON:0003487;1.31e-07;2!UBERON:0001820;1.31e-07;2!UBERON:0003126;1.62e-07;7!UBERON:0001005;1.62e-07;7!UBERON:0001987;2.22e-07;4!UBERON:0001003;2.86e-07;15!UBERON:0007376;2.86e-07;15!UBERON:0002185;6.95e-07;5!UBERON:0010371;8.93e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.08e-13,99;UBERON:0001004,1.36e-13,74;UBERON:0004119,5.06e-13,160;UBERON:0000925,5.06e-13,160;UBERON:0006595,5.06e-13,160;UBERON:0000166,2.24e-12,22;UBERON:0004815,2.91e-11,3;UBERON:0002031,2.91e-11,3;UBERON:0000165,7.28e-11,29;UBERON:0000930,7.28e-11,29;UBERON:0000033,1.21e-10,56;UBERON:0000153,1.56e-10,62;UBERON:0007811,1.56e-10,62;UBERON:0000365,2.32e-10,5;UBERON:0001949,3.60e-10,3;UBERON:0000161,4.79e-10,36;UBERON:0007196,5.89e-10,15;UBERON:0001558,5.89e-10,15;UBERON:0005631,2.11e-09,14;UBERON:0000158,2.11e-09,14;UBERON:0005910,1.24e-08,6;UBERON:0003729,3.57e-08,13;UBERON:0001444,4.53e-08,49;UBERON:0001911,9.21e-08,4;UBERON:0005333,9.21e-08,4;UBERON:0008425,9.21e-08,4;UBERON:0005311,9.21e-08,4;UBERON:0001708,1.08e-07,4;UBERON:0008895,1.08e-07,4;UBERON:0002419,1.37e-07,2;UBERON:0007771,1.37e-07,2;UBERON:0003297,1.37e-07,2;UBERON:0001821,1.37e-07,2;UBERON:0003487,1.37e-07,2;UBERON:0001820,1.37e-07,2;UBERON:0005089,1.37e-07,2;UBERON:0005088,1.37e-07,2;UBERON:0003126,1.67e-07,7;UBERON:0001005,1.67e-07,7;UBERON:0001987,1.91e-07,4;UBERON:0004340,1.91e-07,4;UBERON:0001003,2.85e-07,15;UBERON:0007376,2.85e-07,15;UBERON:0007383,2.85e-07,15;UBERON:0000065,4.07e-07,54;UBERON:0003124,4.68e-07,7;UBERON:0002185,7.02e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.74379428541,21.9880320708123,19.5969625388397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6646973965793,27.0672643232633,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6993858771312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.08326009867495,5.72766853240753,8.60413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8040410988421,11.240175325762,14.3756430548632,9.25884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,9.3733833986777,7.0552493843521,4.96212840348353,3.85101647622248,4.06887513919547,19.935899316591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7313580007429,1.66435439510497,3.62868351995616,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4339335103201,10.3130707608204,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01985876597321,47.454397960666,0,0,0,0,0,0,0,0,0,11.2393742445465,5.95789208831829,3.31793052485919,7.48567578331069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37132380711955,14.0763477862515,16.3336477291984,0,5.16606447205476,13.47771805341,15.9634855273203,1.1486170010348,0,0,0,0,0,0,0,0,0,0,4.41072388765857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,0.890894042497916,1.84296421259539,0,0,0,0,3.3780065300479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,0,0,0,0,0,0,0,0,0,0,0,0,5.99522100397994,1.30815439456455,0,0,0,0,2.55200927785536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17590876897253,1.04471047896483,0.34945333648406,0,0,0,0,13.9664183743324,0,0.451961481561065,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04412843958459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.48483039038042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93746966210833,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04257927353179,0.943757786781923,11.9228589039091,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,10.1535920439888,15.8768183697373,3.45629830907046,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39997695141398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60698544745092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0.23806443146374,0.581300188524055,0.372448285775147,0,0,0,13.2807216217146,1.71116650542641,0.673520530145875,1.2192774916755,0.665320713092027,0.814032686109745,0,0,0,0,0.122241444182866,3.25516942652591,0,0.201273793591026,0 | |||
|short_description=p4@KRT5 | |||
}} |
Revision as of 13:37, 11 January 2014
Short description: | p4@KRT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KRT5_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | -203bp_to_ENST00000551013_5end |
EntrezGene: | KRT5 |
HGNC: | 6442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.28e-12 | 14 |