FFCP PHASE1:Hg19::chr12:52845923..52845938,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3854 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6444 | |||
|TSSclassifier=weak | |||
|UniProt=P04259 | |||
|association_with_transcript=-13bp_to_ENST00000252252,NM_005555,uc001sak.2_5end | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_1_at_KRT6B_5end | |||
|id=chr12:52845923..52845938,- | |||
|ontology_enrichment_celltype=CL:0002076!9.12e-20!43;CL:0000066!1.02e-14!254;CL:0002159!5.53e-13!13;CL:0002251!2.49e-12!21;CL:0000223!3.31e-12!59;CL:0002368!7.39e-12!13;CL:0000622!2.88e-09!5;CL:0002077!1.42e-08!33;CL:0000154!1.33e-07!6;CL:0000244!2.74e-07!4;CL:0000731!2.74e-07!4;CL:0002202!9.63e-07!9;CL:0002632!9.63e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.31e-18;42!CL:0002159;2.30e-17;14!CL:0002368;3.25e-17;13!CL:0000622;7.45e-13;5!CL:0000154;1.24e-10;6!CL:0002251;1.30e-10;20!CL:0000244;5.96e-10;4!CL:0000731;5.96e-10;4!CL:0002077;6.23e-10;34!CL:0002202;1.18e-09;9!CL:0002632;1.18e-09;9!CL:0002621;9.06e-09;3!CL:0002328;2.20e-08;3!CL:0002166;2.85e-08;3!CL:0000307;3.30e-08;3!CL:0002623;6.48e-08;3!CL:0000362;1.78e-07;9!CL:0000240;2.68e-07;6!CL:0000311;2.68e-07;6!CL:0000079;2.68e-07;6!CL:0000237;2.68e-07;6!CL:0000150;6.32e-07;9!CL:0002327;7.35e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.20e-23,42;CL:0002159,2.29e-17,14;CL:0002368,3.25e-17,13;CL:0000223,6.97e-15,58;CL:0000066,1.24e-13,253;CL:0000622,7.46e-13,5;CL:0002077,1.31e-11,34;CL:0000154,1.24e-10,6;CL:0002251,1.30e-10,20;CL:0000244,5.82e-10,4;CL:0000731,5.82e-10,4;CL:0002202,1.18e-09,9;CL:0002632,1.18e-09,9;CL:0002621,9.06e-09,3;CL:0002328,2.23e-08,3;CL:0002166,2.78e-08,3;CL:0000068,3.30e-08,3;CL:0000069,3.30e-08,3;CL:0000307,3.30e-08,3;CL:0000377,3.30e-08,3;CL:0002623,6.48e-08,3;CL:0000362,1.78e-07,9;CL:0000240,2.66e-07,6;CL:0000311,2.66e-07,6;CL:0000079,2.66e-07,6;CL:0000237,2.66e-07,6;CL:0000036,2.66e-07,6;CL:0000357,2.66e-07,6;CL:0000114,2.66e-07,6;CL:0000150,6.32e-07,9;CL:0002327,7.36e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;2.93e-08;58!CL:0000377;3.30e-08;3!CL:0000357;2.68e-07;6!CL:0000114;2.68e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!2.60e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.70e-11!169;UBERON:0000925!2.70e-11!169;UBERON:0006595!2.70e-11!169;UBERON:0000161!1.92e-10!35;UBERON:0001004!1.67e-09!72;UBERON:0003124!3.00e-09!7;UBERON:0000166!3.55e-09!21;UBERON:0003102!7.71e-09!95;UBERON:0005631!1.70e-08!14;UBERON:0000158!1.70e-08!14;UBERON:0000165!2.00e-08!28;UBERON:0000930!2.00e-08!28;UBERON:0000365!2.40e-08!5;UBERON:0005910!7.45e-07!6;UBERON:0007196!8.22e-07!14;UBERON:0001558!8.22e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.06e-09;12!UBERON:0007196;2.68e-09;15!UBERON:0001558;2.68e-09;15!UBERON:0001949;9.06e-09;3!UBERON:0003126;1.57e-08;7!UBERON:0001005;1.57e-08;7!UBERON:0000165;1.84e-08;28!UBERON:0004815;2.20e-08;3!UBERON:0002031;2.20e-08;3!UBERON:0000365;5.95e-08;5!UBERON:0000161;4.35e-07;19!UBERON:0000166;4.35e-07;19!UBERON:0001911;7.35e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.34e-13,74;UBERON:0004119,1.44e-10,160;UBERON:0000925,1.44e-10,160;UBERON:0006595,1.44e-10,160;UBERON:0000153,1.75e-10,62;UBERON:0007811,1.75e-10,62;UBERON:0003102,2.45e-10,99;UBERON:0000166,1.95e-09,22;UBERON:0007196,2.73e-09,15;UBERON:0001558,2.73e-09,15;UBERON:0001949,9.06e-09,3;UBERON:0000065,1.42e-08,54;UBERON:0003126,1.59e-08,7;UBERON:0001005,1.59e-08,7;UBERON:0004815,2.23e-08,3;UBERON:0002031,2.23e-08,3;UBERON:0000165,4.39e-08,29;UBERON:0000930,4.39e-08,29;UBERON:0000365,5.84e-08,5;UBERON:0000033,1.53e-07,56;UBERON:0000161,2.16e-07,36;UBERON:0001911,7.36e-07,4;UBERON:0005333,7.36e-07,4;UBERON:0008425,7.36e-07,4;UBERON:0005311,7.36e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.464448369948228,174.690032650996,192.470582099302,75.7995720841915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527008714158756,0.982343066232845,296.172069381837,629.962768290746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976248230192678,0,0,0,0,0.112611480483322,0,0,0,0,0,367.627285956156,0,0,0,0,4.61068896857864,1.12135520028461,0,0,0,0,0,0,0,0,0,10.2684927878001,0,0,0.485618833104395,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,403.721922258127,275.473581796743,215.677055732531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3696.71886341873,488.947626670645,209.401849533427,56.293774656386,0,0,0,0,0,0,0,0,0,0,0,0,0,296.198915398215,18.8139983582723,172.398518246742,461.226391919669,404.271808472921,1495.57583142349,0,0,6.63449969730471,8.35895729818376,3.1560608356595,2.09543051164158,0,0,23.9501424431787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,5.17365356462525,0,0.184369168541703,0,0,0,0,0,0,7.57818928615649,1.66435439510497,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,124.915530998946,256.537635175407,0,0,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,534.641215874436,889.932476823997,0,0,0,0,0,0,0,0.596586391912706,0,70.2460890284157,24.4081385553685,21.183710274101,58.1657239919412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.50629346009475,0,0,0,0,0,0.633322905892992,0,0,0,108.153654703476,76.4144594110798,116.513353801615,0,26.6913331056163,75.8121640504315,82.034578404285,10.5672764095201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,8.11731248108146,0,1.53580351049616,0,0,0,0,0,0.597743964753209,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,7.97499532978273,2.61724931056649,0,0,0,0,0,0,0,0,0,0,0,0,120.183267568156,158.67143303483,0,0,0,0,1.27600463892768,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,133.367652880968,0.0870592065804026,0,0,0,0,0,228.89407891267,0,0.451961481561065,0,0,0,0,0.561111741760736,0,0.19980960958213,0.72045208577053,0,0,0.14405479798815,0,2.35694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,247.215364760659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,1.63565394255844,0,0,18.3841547322006,0,0,0,0,0,351.936841422122,173.559555549199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0.589848616738702,7.33714394086716,0,0,0,0,0,0,0,0,0,2.95712172434091,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0.620916591138472,0,0,0,0.0657727735628491,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0,0,0,0,0,25.6948043562166,48.8254844488697,94.7025736685306,0,0,0,0,0,0,0,0,132.012064212502,0.975343399858155,0,0,0,68.4852500213387,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,4.46384846514144,56.110284602795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1101642081971,2.3806443146374,1.22718928688412,1.55186785739645,0,0.0636471582781649,0,1042.86322242644,65.3665605072887,61.559776455333,36.1479915179089,6.32054677437425,0.732629417498771,0,0,0,2.34640942403454,3.05603610457166,280.351466859544,0,0.402547587182052,0 | |||
|short_description=p1@KRT6B | |||
}} |
Revision as of 13:34, 11 January 2014
Short description: | p1@KRT6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT6B_5end |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | -13bp_to_ENST00000252252, NM_005555, uc001sak.2_5end |
EntrezGene: | KRT6B |
HGNC: | 6444 |
UniProt: | P04259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.34e-13 | 74 |
endoderm-derived structure | 1.44e-10 | 160 |
endoderm | 1.44e-10 | 160 |
presumptive endoderm | 1.44e-10 | 160 |
anterior region of body | 1.75e-10 | 62 |
craniocervical region | 1.75e-10 | 62 |
surface structure | 2.45e-10 | 99 |
oral opening | 1.95e-09 | 22 |
tracheobronchial tree | 2.73e-09 | 15 |
lower respiratory tract | 2.73e-09 | 15 |
gingival epithelium | 9.06e-09 | 3 |
respiratory tract | 1.42e-08 | 54 |
trachea | 1.59e-08 | 7 |
respiratory airway | 1.59e-08 | 7 |
lower respiratory tract epithelium | 2.23e-08 | 3 |
epithelium of bronchus | 2.23e-08 | 3 |
mouth | 4.39e-08 | 29 |
stomodeum | 4.39e-08 | 29 |
urothelium | 5.84e-08 | 5 |
head | 1.53e-07 | 56 |
orifice | 2.16e-07 | 36 |
mammary gland | 7.36e-07 | 4 |
mammary bud | 7.36e-07 | 4 |
mammary ridge | 7.36e-07 | 4 |
mammary placode | 7.36e-07 | 4 |