FFCP PHASE1:Hg19::chr12:52282009..52282021,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=341405 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13788 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z3H0 | |||
|association_with_transcript=8bp_to_ENST00000340970_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_4_at_ANKRD33_5end | |||
|id=chr12:52282009..52282021,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.57e-18!7;CL:0000586!1.57e-18!7;CL:0002535!2.00e-08!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.68e-66;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.13e-13;4!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7!DOID:3905;8.37e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.13e-13,4;DOID:1325,2.18e-08,7;DOID:3904,2.18e-08,7;DOID:3905,8.37e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.66e-29!2;UBERON:0002757!1.66e-29!2;UBERON:0010134!1.66e-29!2;UBERON:0002784!1.66e-29!2;UBERON:0005408!1.66e-29!2;UBERON:0001899!1.66e-29!2;UBERON:0003296!2.76e-15!4;UBERON:0010133!2.76e-15!4;UBERON:0000966!1.42e-12!5;UBERON:0005388!1.42e-12!5;UBERON:0001802!1.42e-12!5;UBERON:0000970!8.30e-12!20;UBERON:0002104!2.94e-11!21;UBERON:0000020!2.66e-10!23;UBERON:0001032!6.98e-10!24;UBERON:0004456!6.98e-10!24;UBERON:0001894!3.88e-09!7;UBERON:0006222!3.88e-09!7;UBERON:0006955!2.00e-08!2;UBERON:0004801!2.00e-08!2;UBERON:0000473!5.96e-08!8;UBERON:0000019!2.27e-07!19;UBERON:0000047!2.27e-07!19;UBERON:0004088!2.27e-07!19;UBERON:0003072!2.27e-07!19;UBERON:0003071!2.27e-07!19;UBERON:0004128!2.27e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.31e-40;5!UBERON:0005388;3.31e-40;5!UBERON:0001802;3.31e-40;5!UBERON:0000970;4.26e-23;20!UBERON:0002104;4.76e-22;21!UBERON:0000020;3.18e-20;23!UBERON:0001032;2.00e-19;24!UBERON:0004456;2.00e-19;24!UBERON:0000019;1.81e-11;19!UBERON:0000047;1.81e-11;19!UBERON:0004088;1.81e-11;19!UBERON:0010230;1.81e-11;19!UBERON:0001456;1.77e-10;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,9.87e-34,6;UBERON:0005388,9.87e-34,6;UBERON:0001802,9.87e-34,6;UBERON:0000970,4.76e-22,21;UBERON:0002104,4.76e-22,21;UBERON:0000020,2.00e-19,24;UBERON:0001032,2.00e-19,24;UBERON:0004456,2.00e-19,24;UBERON:0000019,6.00e-11,20;UBERON:0000047,6.00e-11,20;UBERON:0010312,6.00e-11,20;UBERON:0004088,6.00e-11,20;UBERON:0010230,6.00e-11,20;UBERON:0003072,6.00e-11,20;UBERON:0004128,6.00e-11,20;UBERON:0003071,6.00e-11,20;UBERON:0001456,4.74e-10,22;UBERON:0005085,1.99e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64951851951331,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.672567444437648,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,3.57382720883282,1.58013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08886981816315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@ANKRD33 | |||
}} |
Revision as of 13:30, 11 January 2014
Short description: | p4@ANKRD33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ANKRD33_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 8bp_to_ENST00000340970_5end |
EntrezGene: | ANKRD33 |
HGNC: | 13788 |
UniProt: | Q7Z3H0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 9.87e-34 | 6 |
photoreceptor array | 9.87e-34 | 6 |
posterior segment of eyeball | 9.87e-34 | 6 |
eye | 4.76e-22 | 21 |
visual system | 4.76e-22 | 21 |
sense organ | 2.00e-19 | 24 |
sensory system | 2.00e-19 | 24 |
entire sense organ system | 2.00e-19 | 24 |
camera-type eye | 6.00e-11 | 20 |
simple eye | 6.00e-11 | 20 |
immature eye | 6.00e-11 | 20 |
ocular region | 6.00e-11 | 20 |
eyeball of camera-type eye | 6.00e-11 | 20 |
optic cup | 6.00e-11 | 20 |
optic vesicle | 6.00e-11 | 20 |
eye primordium | 6.00e-11 | 20 |
face | 4.74e-10 | 22 |
ectodermal placode | 1.99e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.13e-13 | 4 |
bronchus cancer | 2.18e-08 | 7 |
bronchogenic carcinoma | 2.18e-08 | 7 |
lung carcinoma | 8.37e-07 | 9 |