FFCP PHASE1:Hg19::chr12:21757799..21757811,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4707 | |||
|TSSclassifier=strong | |||
|UniProt=P54840 | |||
|association_with_transcript=-18bp_to_ENST00000261195,NM_021957,uc001rfb.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_GYS2_5end | |||
|id=chr12:21757799..21757811,- | |||
|ontology_enrichment_celltype=CL:0000136!1.83e-14!15;CL:0000181!2.73e-07!12;CL:0000417!2.73e-07!12;CL:0000668!2.73e-07!12;CL:0000414!2.73e-07!12;CL:0000412!2.73e-07!12;CL:0000182!2.73e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.88e-14;12!CL:0000136;5.27e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.88e-14,12;CL:0000136,2.42e-11,15 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.51e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!2.11e-12!25;UBERON:0000015!2.11e-12!25;UBERON:0002423!2.11e-12!25;UBERON:0006235!2.11e-12!25;UBERON:0004161!2.11e-12!25;UBERON:0002107!1.03e-11!19;UBERON:0006925!1.03e-11!19;UBERON:0008836!1.03e-11!19;UBERON:0008835!4.31e-10!22;UBERON:0003894!4.31e-10!22;UBERON:0000989!4.44e-10!1;UBERON:0008811!4.44e-10!1;UBERON:0006258!4.44e-10!1;UBERON:0005876!4.44e-10!1;UBERON:0004874!4.44e-10!1;UBERON:0002372!1.07e-09!1;UBERON:0001961!1.07e-09!1;UBERON:0001744!1.07e-09!1;UBERON:0001735!1.07e-09!1;UBERON:0009854!1.21e-09!23;UBERON:0007499!7.39e-09!25;UBERON:0005057!1.65e-08!26;UBERON:0009856!1.65e-08!26;UBERON:0003929!2.85e-07!54;UBERON:0002365!4.20e-07!31;UBERON:0002330!4.20e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.48e-24;19!UBERON:0006925;6.48e-24;19!UBERON:0002423;3.18e-18;25!UBERON:0002365;1.07e-14;31!UBERON:0002330;1.07e-14;31!UBERON:0002368;9.88e-13;33!UBERON:0000949;2.62e-09;43!UBERON:0005172;8.52e-07;52!UBERON:0005173;8.52e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.18e-24,19;UBERON:0006925,6.18e-24,19;UBERON:0008836,6.18e-24,19;UBERON:0008835,1.06e-20,22;UBERON:0003894,1.06e-20,22;UBERON:0009854,8.25e-20,23;UBERON:0007499,3.07e-18,25;UBERON:0009497,3.07e-18,25;UBERON:0000015,3.07e-18,25;UBERON:0002423,3.07e-18,25;UBERON:0006235,3.07e-18,25;UBERON:0004161,3.07e-18,25;UBERON:0009856,1.52e-17,26;UBERON:0002365,9.71e-15,31;UBERON:0002330,9.71e-15,31;UBERON:0002368,4.55e-13,35;UBERON:0000949,3.50e-10,45;UBERON:0003929,1.72e-08,54;UBERON:0005172,1.72e-08,54;UBERON:0005173,1.72e-08,54;UBERON:0002530,8.99e-08,59;UBERON:0002417,1.21e-07,60;UBERON:0000916,1.21e-07,60 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,1.96565443335525,11.2250082269467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.83111688522689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.71979166369589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8448652921781,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,2.1760712134779,0.2506898940227,3.06345576763462,2.62298104567844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@GYS2 | |||
}} |
Revision as of 12:36, 11 January 2014
Short description: | p3@GYS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GYS2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -18bp_to_ENST00000261195, NM_021957, uc001rfb.2_5end |
EntrezGene: | GYS2 |
HGNC: | 4707 |
UniProt: | P54840 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.88e-14 | 12 |
fat cell | 2.42e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
liver | 6.18e-24 | 19 |
digestive gland | 6.18e-24 | 19 |
liver bud | 6.18e-24 | 19 |
hepatic diverticulum | 1.06e-20 | 22 |
liver primordium | 1.06e-20 | 22 |
digestive tract diverticulum | 8.25e-20 | 23 |
epithelial sac | 3.07e-18 | 25 |
epithelium of foregut-midgut junction | 3.07e-18 | 25 |
anatomical boundary | 3.07e-18 | 25 |
hepatobiliary system | 3.07e-18 | 25 |
foregut-midgut junction | 3.07e-18 | 25 |
septum transversum | 3.07e-18 | 25 |
sac | 1.52e-17 | 26 |
exocrine gland | 9.71e-15 | 31 |
exocrine system | 9.71e-15 | 31 |
endocrine gland | 4.55e-13 | 35 |
endocrine system | 3.50e-10 | 45 |
gut epithelium | 1.72e-08 | 54 |
abdomen element | 1.72e-08 | 54 |
abdominal segment element | 1.72e-08 | 54 |
gland | 8.99e-08 | 59 |
abdominal segment of trunk | 1.21e-07 | 60 |
abdomen | 1.21e-07 | 60 |