FFCP PHASE1:Hg19::chr12:12715266..12715275,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17909 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BY84 | |||
|association_with_transcript=41bp_to_ENST00000228862,uc001rao.1_5end | |||
|description=CAGE_peak_16_at_DUSP16_5end | |||
|id=chr12:12715266..12715275,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;9.63e-12;6!CL:0000898;6.90e-11;3!CL:0000039;2.53e-10;7!CL:0000586;2.53e-10;7!CL:0000895;8.65e-09;1!CL:0000791;8.71e-07;18!CL:0000789;8.71e-07;18!CL:0002419;8.71e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,5.67e-12,6;CL:0000898,2.67e-11,3;CL:0000039,2.17e-10,7;CL:0000586,2.17e-10,7;CL:0000810,5.28e-09,1;CL:0000895,5.28e-09,1;CL:0002436,5.28e-09,1;CL:0002427,5.28e-09,1;CL:0002428,5.28e-09,1;CL:0002429,5.28e-09,1;CL:0002433,5.28e-09,1;CL:0002431,5.28e-09,1;CL:0002432,5.28e-09,1;CL:0000791,8.47e-07,18;CL:0000789,8.47e-07,18;CL:0002420,8.47e-07,18;CL:0002419,8.47e-07,18;CL:0000790,8.47e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002427;8.65e-09;1!UBERON:0001045;8.65e-09;1!UBERON:0009117;2.31e-07;10!UBERON:0005564;2.31e-07;10!CL:0000790;8.71e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;8.65e-09;1!DOID:4549;8.65e-09;1!DOID:5861;8.65e-09;1!DOID:6496;8.65e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.02e-09,1;DOID:4549,9.02e-09,1;DOID:5861,9.02e-09,1;DOID:6496,9.02e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.30e-09;8!UBERON:0001154;8.65e-09;1!UBERON:0001153;8.65e-09;1!UBERON:0007195;8.65e-09;1!UBERON:0009854;8.65e-09;1!UBERON:0003135;9.86e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.77e-09,8;UBERON:0007195,1.32e-08,1;UBERON:0001154,1.53e-08,1;UBERON:0001153,1.53e-08,1;UBERON:0001045,1.53e-08,1;UBERON:0003135,8.97e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0.767658796194425,0.154816123316076,0,0,0,0,0.142169232487422,0,1.10799081706375,0.802177789880567,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0,0.224723484445085,1.22433556948361,1.60464513538047,0.639337125799041,0,0,0,1.45104619314292,0.56738522469114,0,0,1.0429658368404,0,0,1.47311054395026,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,0.393010762749165,0.411202997999018,0.334372990781356,0.977766799900771,0.946895611469467,0,0.222820913770347,1.76763544484902,0.443067789167242,0.270803863765016,0.128091319725675,0,0,0,0.289803085735052,1.03800594213442,1.07016331235885,1.04535523804977,0,1.53288197440768,0.68725489096526,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,1.00803371612366,0.267440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0.354920400119532,0.168584690078102,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0.368965315629341,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,1.38895653772983,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,1.2942852049117,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0.725156697549733,0,0.184161977871793,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.618246069886334,0.0915694648183434,0.082509499920588,0.574265537996172,0,0,0,0,0.15350367472613,0,0.322260734604821,0,0,0.178064071293475,0,0.384380134730212,0.382838137483752,0.10115778085555,0,0,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.470719003883896,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0.494411622680279,0,0,1.10513566212459,0,0.715880777515084,0.369254416383208,0,0.179736702294654,0.716084698702437,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0.260427761085233,0.349839999984783,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0.871507708151921,0,0,0.113942055847001,0.23056390438806,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0.901940516486955,0.518440956986236,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0.246346371159628,0.0969890164884194,1.235585773681,0.225980740780532,0,0,0.126621591911757,0.977756913674015,0.0801588202515337,0,0,0.144090417154106,0.114536596165916,0,0,0.248505071130865,0.707082103850386,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0.236349546921671,0.412079291905832,0.337017719270924,0.295282444544246,0.254019996197353,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0.157363764404994,0.528001682597033,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.258565912723101,0,0.171086837884329,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,1.7548292581589,0.919036730290385,0.655745261419609,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.2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| |||
|short_description=p16@DUSP16 | |||
}} |
Revision as of 12:17, 11 January 2014
Short description: | p16@DUSP16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_DUSP16_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000228862, uc001rao.1_5end |
EntrezGene: | DUSP16 |
HGNC: | 17909 |
UniProt: | Q9BY84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 5.67e-12 | 6 |
naive T cell | 2.67e-11 | 3 |
germ line cell | 2.17e-10 | 7 |
germ cell | 2.17e-10 | 7 |
CD4-positive, alpha-beta thymocyte | 5.28e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.28e-09 | 1 |
mature CD4 single-positive thymocyte | 5.28e-09 | 1 |
resting double-positive thymocyte | 5.28e-09 | 1 |
double-positive blast | 5.28e-09 | 1 |
CD69-positive double-positive thymocyte | 5.28e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.28e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.28e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.28e-09 | 1 |
mature alpha-beta T cell | 8.47e-07 | 18 |
alpha-beta T cell | 8.47e-07 | 18 |
immature T cell | 8.47e-07 | 18 |
mature T cell | 8.47e-07 | 18 |
immature alpha-beta T cell | 8.47e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
testis | 3.77e-09 | 8 |
stroma of bone marrow | 1.32e-08 | 1 |
vermiform appendix | 1.53e-08 | 1 |
caecum | 1.53e-08 | 1 |
midgut | 1.53e-08 | 1 |
male reproductive organ | 8.97e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.02e-09 | 1 |
extraosseous chondrosarcoma | 9.02e-09 | 1 |
myxoid chondrosarcoma | 9.02e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 9.02e-09 | 1 |