FFCP PHASE1:Hg19::chr12:117197711..117197750,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84900 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25905 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_uc001twc.3_5end | |||
|description=CAGE_peak_4_at_RNFT2_5end | |||
|id=chr12:117197711..117197750,+ | |||
|ontology_enrichment_celltype=CL:0000039!5.09e-08!7;CL:0000586!5.09e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.83e-14;7!CL:0000586;1.83e-14;7!CL:0002322;2.93e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.51e-14,7;CL:0000586,1.51e-14,7;CL:0002322,2.56e-09,5;CL:0002536,7.68e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;5.81e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.99e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.19e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.43e-11,14;UBERON:0000158,3.43e-11,14;UBERON:0000305,1.21e-09,7;UBERON:0004871,2.19e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.83973783769224,3.69273769519835,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,2.9801228241701,2.13461532569859,2.59745578335141,0,0.383829398097213,0.309632246632152,0,0,0,0,0,1.17440175733939,0,0,0,0.447830948479849,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,1.05353633910031,0.196709770113833,0.393010762749165,0,0,0,0,0,0.334231370655521,0,0.443067789167242,0.541607727530031,0.768547918354051,0.260118695119756,0.657751618414705,0,0,0.14828656316206,0.535081656179426,0,0,0,0,0,0.318565414324097,0,0,0,0.895906278080929,0,0.473554504088034,0.821127996921047,0.403213486449465,0,0.144824403882799,2.43806866313962,0,0.255725123687061,0.722878304769133,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0,0.74291500265913,0.198762407366705,0.860234595106124,0,0,0.838998872419812,0.550236083880135,1.04497483268405,0,0.35576626268671,0,1.20848795132744,0,0.488124115096339,0.367663080345869,0,0,0,0.337834441449967,1.53316637465883,0,0.366403487860815,0,0,0.872188104285069,0,0,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0.605429710579726,0,0.468642863667593,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,2.07355300420312,0.265059536642971,2.67246068599892,3.93912009058408,2.77552935963191,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.548751427043128,0,0.201057944823262,0.277765335475589,0.325808305310325,1.03993478527958,0,0,0,1.15493158208859,0.925971025153221,2.09279567458058,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.616339038092582,0,0.432359860250884,0.88369703398466,0,0,0,0,0,0,0,0.448524337381443,0,0.7333828582095,0.387815147273333,0,0,0,0,0.257207374262142,1.41849132023278,0,0.714889968290738,0,0,0,0.710783897485092,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,1.00034104211935,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0.783204629850962,0.343143423810856,0.620304078368662,0.431428401637234,0,2.42502057157008,0,2.41912234663744,0,0,0.280660094433074,0,0,0,1.48418066444991,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0.103041011647722,0,0,2.29706215198469,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,1.59691809095107,0,0,1.5743737541619,0,0.949138274156178,0.190630193923825,0,0,0,1.56989728039846,0.179872457583315,0,0,0.606547444719948,1.58510321173008,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0.438450885253763,1.15755106853338,0.655894752046633,0.202910376962704,0,0,1.14729081763241,0.491245205065606,0,0,0,0,0,0.349934720244983,0,0,0,0.282431402330337,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,3.21654377823046,1.605880751037,3.43059502224781,0,0,0,0,0,4.68931428964897,0.556812347790485,0,0,1.99843180798692,2.81974010175699,2.43282702530686,0.293016358543788,0,0,0,2.3874448473769,1.18785872333055,2.15012491469462,0,0,0,0.988823245360557,0,0.796991953004279,0.828851746593443,0,0,0,0,0,4.83357171624145,0,0,0,0,0,0,0,0,0,0,9.55864965598197,2.03402920234213,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.230850775511391,0,5.07240589653732,7.36012684160132,6.7361370591645,0.31900115973192,0.549585560411174,0,0,0,0,2.03036094555463,2.35275041181287,3.18861015254101,2.84630599086278,0.953619473882272,0,0,0,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,0,1.20990716048664,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0.2249738915515,0,0.0607495566580247,0,0,0.262272940674991,0,2.68931008999267,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.517131825446202,0.26446520348538,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,6.22568857213039,0,0,0,0,0,10.7241561172011,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,1.36402216187572,0.265729680626726,1.79921933681429,0,0,0,1.79988656269437,5.54796994409533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20513673456923,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,7.07818340086442,0,0,0,0,0,0.150420656698515,0,0,6.80957405651698,0,0,0.0675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| |||
|short_description=p4@RNFT2 | |||
}} |
Revision as of 16:07, 11 January 2014
Short description: | p4@RNFT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNFT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_uc001twc.3_5end |
EntrezGene: | RNFT2 |
HGNC: | 25905 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.51e-14 | 7 |
germ cell | 1.51e-14 | 7 |
embryonic stem cell | 2.56e-09 | 5 |
amniotic epithelial cell | 7.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.43e-11 | 14 |
membranous layer | 3.43e-11 | 14 |
amnion | 1.21e-09 | 7 |
somatic layer of lateral plate mesoderm | 2.19e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.99e-07 | 31 |