FFCP PHASE1:Hg19::chr12:113623378..113623400,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25925 | |||
|TSSclassifier=strong | |||
|UniProt=Q96K30 | |||
|association_with_transcript=13bp_to_ENST00000436053_5end | |||
|description=CAGE_peak_4_at_C12orf52_5end | |||
|id=chr12:113623378..113623400,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.00e-39!254;CL:0002321!1.13e-15!248;CL:0000220!2.73e-15!246;CL:0000076!2.41e-13!62;CL:0000548!6.44e-12!679;CL:0000004!6.44e-12!679;CL:0000255!6.44e-12!679;CL:0000012!1.47e-11!682;CL:0000223!7.05e-10!59;CL:0000063!1.31e-09!578;CL:0002076!9.16e-08!43;CL:0000077!9.31e-08!19;CL:0000213!4.37e-07!57;CL:0000215!4.37e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.27e-07;19!CL:1000449;6.71e-07;15!CL:0000076;6.75e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.92e-40,253;CL:0002321,3.48e-15,250;CL:0000076,1.03e-13,63;CL:0000223,5.64e-10,58;CL:0000077,5.58e-08,19;CL:0002076,1.66e-07,42;CL:0000213,2.19e-07,58;CL:0000215,2.19e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.09e-27!239;DOID:162!1.18e-27!235;DOID:305!6.92e-21!106;DOID:0050687!3.74e-19!143;DOID:0050686!2.85e-11!137 | |||
|ontology_enrichment_disease_v019=DOID:305;6.14e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.08e-27,235;DOID:14566,8.84e-27,239;DOID:305,3.76e-21,106;DOID:0050687,9.11e-19,143;DOID:0050686,6.25e-11,137 | |||
|ontology_enrichment_uberon=UBERON:0001048!4.42e-10!168;UBERON:0003104!1.28e-08!238;UBERON:0009142!1.28e-08!238;UBERON:0005177!3.98e-08!107;UBERON:0001041!1.51e-07!98;UBERON:0004119!1.68e-07!169;UBERON:0000925!1.68e-07!169;UBERON:0006595!1.68e-07!169;UBERON:0000063!1.91e-07!97;UBERON:0009569!2.73e-07!113;UBERON:0001737!3.75e-07!9;UBERON:0000481!4.31e-07!347;UBERON:0000072!5.76e-07!46;UBERON:0008947!7.89e-07!38;UBERON:0003258!7.89e-07!38;UBERON:0000466!8.45e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;3.62e-08;37!UBERON:0001737;1.81e-07;9!UBERON:0001557;1.81e-07;9!UBERON:0000353;5.35e-07;15!UBERON:0002113;6.00e-07;24!UBERON:0011143;6.00e-07;24!UBERON:0006555;6.71e-07;15!UBERON:0004819;6.71e-07;15!UBERON:0001285;6.71e-07;15!UBERON:0007684;6.71e-07;15!UBERON:0006554;6.93e-07;30!UBERON:0001008;6.93e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.78e-10,101;UBERON:0001048,3.28e-08,160;UBERON:0002100,3.41e-08,199;UBERON:0009569,1.06e-07,112;UBERON:0001737,2.36e-07,9;UBERON:0008947,2.92e-07,38;UBERON:0003258,2.92e-07,38;UBERON:0005172,7.77e-07,54;UBERON:0005173,7.77e-07,54 | |||
|phase1_expression=1.63510541343501,0.428201047781966,1.69145284915165,4.00293193412522,0,4.36169262050184,0,3.79031924056099,0.783556884599516,5.40614660303319,23.0274385430901,0.655324116390517,2.90143676051299,0.618831764800233,0.331397375727916,3.36162573225888,1.80808358407193,1.46062018077475,2.43966399395253,3.81675280038043,2.65200898617529,2.19418305034661,1.43117993565528,2.32686522623903,1.12988375635323,4.35556412763322,4.76183418809685,4.80135766013443,0.393364276848904,0.383829398097213,0,9.19421224478927,6.32532429434325,2.21852406100073,6.42977764816504,7.96147701929561,3.22960483268332,0,0.200544447470142,0.868043482863407,0,0.32389366601898,0.77272670290256,0.436194716338694,0,0.970336244751265,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0,0.645484683583826,1.35426486594342,0.188242339542605,1.09162460023138,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0,0,0.736555271975129,0,0.211255286311942,0,0.209658645508376,0,0,0.32145117339416,0.285012743741249,0,0.182664153764634,0,1.09227722252426,0,1.28019066769952,0.800791974072025,1.14950487990897,0.661044872784862,0,1.1384259382189,1.76171156811282,0.382273228125229,0,0.560508562981536,2.63384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0.83593247695339,0,0,0,1.78256731016278,0.294605907474837,1.10766947291811,1.35401931882508,0.640456598628376,0.780356085359269,1.47994114143309,0.552700035571697,0.869409257205157,0.444859689486181,0,1.04535523804977,1.0197840842781,0,0,0,0.318565414324097,0,0,0.301150238155546,0.383959833463255,0,0.473554504088034,0,0.604820229674197,0.534880391567015,0.144824403882799,0,0.670700859703636,1.91793842765295,1.44575660953827,1.50401373190767,2.31754430337318,0,0,5.76662384700814,5.09977614163897,5.35792192728069,1.17881167947941,7.28590576585084,3.70784442784429,0.649094787309367,0.870648686496336,0.664789802594326,0.238490624305342,0.571994910780128,0.371457501329565,1.98762407366705,5.16140757063675,1.04142150482278,0.56530794192401,2.09749718104953,1.92582629358047,4.38889429727302,1.55050055501597,0.35576626268671,1.00416183829401,2.01414658554573,3.04108842287405,2.92874469057803,2.20597848207521,3.24056779152704,2.05389375053383,1.79623498100936,2.47745257063309,1.53316637465883,4.74632829784064,2.19842092716489,0,0,5.66922267785295,1.98788780678127,2.5326102332916,1.05927344650575,0.860509862246441,3.19201543978521,1.68203280042692,1.06748995729705,3.45334567784024,1.24484414159907,1.21239604862719,1.63461903113459,3.48122083583342,4.03323147135999,3.51482147750695,3.74592092196385,3.4228309292667,2.09228152772521,0.939475989150119,2.5899671098901,0.702254033511242,1.22492502752936,1.35117749042945,0.516628905878827,0,1.97813543422845,2.73048408581408,3.59309070908119,1.17835279767846,1.00094815897571,1.38532057742091,0.877955241761676,0.30648779579902,0.600952235626387,0.794025282120147,0.538168907066586,0.85422955527427,1.90738711043606,0.600182192168805,0.824420233907511,0.515281080091258,1.48893485065272,0.168776332241266,1.26668106709558,0.757301322732344,0.920498986422993,0.80823028409406,0.710019185033229,1.41052937518696,1.01736355386293,4.05847791642923,4.09119180886252,3.44165514466805,3.17131635936948,3.31324420803713,4.18298194330266,2.69518743039963,4.28945446488568,2.91981887260664,7.8224766164908,3.21620469096443,9.66944449467364,0.464367928031979,3.60939740834793,9.22793040310782,11.4637589253109,12.0505514941741,8.71322384585912,9.58669554006587,8.30447166888838,8.76403503041069,10.203516186518,10.3881732375525,3.69077727312324,8.41450642820675,6.5851841813024,0,0,5.89696330006576,2.36315962672562,1.7658523976586,4.05861847192275,5.14703430895577,6.14601598288303,14.6122279234905,3.61904300681871,2.4998880192803,3.25808305310325,2.07986957055916,5.77325368101093,2.78232971940184,1.17408694235822,2.02113026865503,2.77791307545966,3.04406643575357,7.90204397959275,15.4527509177077,0.738651018262192,0,1.0404181360211,3.74935335947108,1.00789276919316,3.40260233381728,0.626909658919938,5.23141089325132,3.4504441124869,0,1.14462964217194,0,0.144119953416961,0.25248486685276,0.571481048629521,0.381988425558278,2.34434894420094,0,1.13110241973656,3.00343057843917,2.28661146104463,5.15802987988659,5.23152082599936,2.4935017179123,2.45616259939778,10.7296933755565,2.535908257668,1.32969058292435,3.12022310734098,3.60090323966999,7.09245660116391,3.72991050622539,2.85955987316295,3.7983512377401,5.76268235746538,1.95441710576241,1.77695974371273,3.95975936466715,4.82303003295338,6.10073421020206,2.49932477955143,2.43247561282381,1.00451418286425,0,5.5113716763064,2.29723871668228,0,2.60606352001643,2.87666851570537,1.79060963239896,0.784596007954691,0.197030760201927,0.431255149719035,0.513372145118994,0.76228387266739,1.30139853857622,0.773288812777695,0.502548796003046,0.637938751653163,0.749007023947182,0,0,0.24538298343828,1.50051156317903,0.271265023699736,0.623912584592421,1.07057393278297,0.788512075169673,1.52283839490527,3.61135319673263,6.82222512167955,1.03473071292505,0.664225598535437,1.29058417979192,1.65078867489357,5.67823356641948,2.05886054286514,0.413536052245775,0.215714200818617,0.74709290462411,8.18444442904901,1.66435439510497,1.20956117331872,1.48864684691266,0.460385919864187,1.68396056659844,2.05022638809122,1.02341449813341,2.57366273829772,1.48418066444991,2.15893571323718,1.77561725313127,1.14978018419333,1.03850885836724,1.27831416305955,10.0313343161046,4.81215528727884,4.51196845785892,2.29628896329214,2.54927635209404,2.49136388422906,3.15839729035188,2.23344477602803,12.5495963068297,5.84556898613043,2.21658420675039,5.68666920354483,3.2317804002538,2.15915916102139,10.7959076883203,4.33514300070165,6.52196706011309,5.09752546090077,4.98645605357235,6.26849313222099,0.657779629937804,0.784306353074702,5.12900250232778,5.576248976895,7.80908147194327,1.23649213977267,2.38080608527693,2.64030399745882,6.3169209179579,5.85054221432869,1.6068392984416,2.80345083047154,2.15668063960502,1.99554777143968,2.89456802217514,0.859361958946189,1.0151168573996,2.21589231281862,1.60257664164127,1.65284915360978,2.11409074101617,1.27612712494584,3.0347334256665,3.71876439437829,0,0.6970372701606,1.54016790088044,2.12922412126809,0,1.29726953372744,1.71749864090389,2.97726695487734,0.949138274156178,1.71567174531442,4.86205803491534,0,0.95460974377781,0.78494864019923,1.2591072030832,1.64722217841633,2.12062324222236,3.43710218674637,6.34041284692033,1.68503382495592,6.82687234725426,0.731140468893853,0,1.22849920267187,1.55545975149084,2.26016233240486,2.75682671773062,0,2.63070531152258,5.78775534266688,0.655894752046633,2.23201414658974,3.40805847909725,1.40847801266121,1.72093622644862,1.76848273823618,1.78335525740625,0.709522128141196,2.32218398827431,0.658589785919804,3.41525856389144,4.19921664293979,3.07910760721639,3.35151137767894,3.26672954583968,2.63602642174982,3.44404298136984,5.05414427002877,3.10401107475673,2.06751060186264,0,0,0,0.952927101831156,0,0,0,0.79312517629427,5.5548516986286,4.81239927631679,2.94048259177238,4.64507937814297,4.32807638929335,3.55709216742071,3.34795172730527,4.19116680008915,1.53204296105893,2.96343015813436,3.89546328329467,1.40398589056729,0.912938716132769,6.11051593514791,7.51903431270201,10.8346737793026,1.4452926759333,0.201799707191048,1.27753871307098,3.43505344755765,2.15068535015921,2.68411329470899,3.00328455081435,2.54004524022652,1.39203086947621,1.23087398947712,2.97501246323581,0.66614393599564,0,1.12284324244932,0.146508179271894,1.09224469574562,0.334330152832435,2.84136146806413,0.71623345421307,0.890894042497916,0.614321404198464,0,1.68803299692615,4.89758302100786,6.9217627175239,3.80025734630388,0.597743964753209,0.552567831062295,2.26739473068848,1.53403023753232,5.04647702390385,0.622079175323615,4.673154259661,2.86433879480975,1.02314474045374,0.295930216910801,0,0,0.969332746095218,1.20598527610407,0,3.38556089410803,3.76077999983642,0,3.86897724170699,4.83081935556256,2.12748913591143,2.06846023944879,2.62444152044929,1.04174996959975,1.77148277162768,1.92954301800653,1.52581736317083,4.86548743697388,0.886642856860642,0,4.35753854075961,1.39423744278603,1.46205491157214,4.55768223388005,0.922255617552241,1.07709173291727,1.95565269459615,1.5950057986596,1.09917112082235,1.5991043280559,4.08773192782946,1.72678282034527,2.82559859230266,3.38393490925771,2.94093801476609,2.01385904371011,3.03605972358696,1.58936578980379,2.53197677433632,3.26465616318295,3.25112064298064,4.760550074326,1.99052386215701,1.23840590304675,0,2.07564790076435,2.59484271787656,3.44592433368003,0.404406797884062,0.802577647298789,0.937057782901357,22.0770294950956,4.10895699757388,7.28341138602278,0,1.20990716048664,0.30607276163049,0.442306057399416,5.11099626009275,4.87334499567062,5.98188485436467,8.93678280863847,4.39506085770115,4.77889719091835,9.96133411104275,0.693373365065693,10.9342635151132,2.15583274311631,3.3082498500553,0.698906672968121,3.61170668190395,10.1594147853539,8.25909283073897,10.4286630457576,0.581934098930517,3.00070830751101,1.35588444468319,6.44097045839729,7.15372602130763,1.13959432720582,4.49768180290047,2.88571752905521,1.49417096317547,7.19314594495669,3.74635084600676,1.25990255782507,6.69220491661662,14.5495345968031,3.10631338913581,2.12124631155116,1.49494626680975,2.61507115780833,1.22397861163586,3.75635766871975,1.80126086612937,1.09524303113594,1.27746588066972,2.57859264851974,9.20105739977601,0.558564802544508,1.14580212005842,0,1.79711100449092,2.57535628881943,1.11585728720936,1.41085292222125,0.720599767084807,0,3.15132729228895,3.79112948553366,3.23537010500087,9.74432066996013,8.7213532027758,0,0.953423842781029,2.57205037544031,3.85110422472255,1.24632101408756,0,0,1.27574068981852,2.68347750079413,1.65491985328316,1.99327434912993,4.22401346077626,4.30289614398828,4.60596473566669,1.42939065274673,1.32418394073086,4.068296602476,3.25799761052228,2.5926644736038,0.979762080328227,0,2.38068310173083,3.9189245010647,3.05942647104339,3.07759690723973,2.65013777824443,0.775697738169303,1.71902382265497,2.73738940614927,2.11444506695002,0.747511887973863,0,0,0.496166021811951,2.37133958277533,6.45500771418748,17.2352139597949,0.544017803369474,0.7520696820681,0.306345576763462,0.327872630709804,2.19875734750328,0,1.58634144372552,0.500763722825999,1.14681839138014,1.22021956690538,1.8628920882415,7.60917492149269,2.74956897516635,3.1846314683746,3.99651466962954,3.52898729547258,0.936669811613763,3.4781046866598,2.23882204330311,2.10341978862502,2.21922344601045,1.13641803165053,2.51567901752575,1.77962244319307,1.37304041038154,0.907385542579434,1.86524640699337,1.92211694986524,2.86734180894664,0.899606224327209,1.08684069813382,0.414706207840855,0.53168342911599,2.60872530905867,0.751288044986092,2.66563648518157,1.22061219961398,1.45478927362048,1.28892668450986,3.24823631914946,1.59238355479446,1.20008329398946,2.06037423109676,1.01024846629776,0,2.88929745610955,2.35885750512418,7.04684588306071,13.3756496052241,5.55653938377201,5.62894420364875,8.05899784866693,8.95524196766819,5.04353314031026,3.88716121080938,5.40159307158561,8.10923715134749,1.79369063011563,6.90860683462397,20.0547571077072,1.65910123382077,0.389720617678777,0.265729680626726,0.654261577023377,9.50068561654597,8.60205180638018,1.26787274015176,1.39991177098451,0.853533837553127,1.89436477626897,2.27006381426734,3.49801305478497,4.33626473930278,3.11038630016486,2.04630994085843,1.50954735955355,1.25812753484717,1.52893493468819,1.18812770967818,1.48802444071178,2.47871528518004,1.11728983594649,0.636008701306837,0.70975570501128,4.00285374142735,3.87943538059752,0.918736432059601,0.834979926253974,0,1.11743701340006,0.82046545696302,0.756215088665154,0.899044282034833,1.45328081068666,0,6.47774942106769,5.19066782730058,3.66857197043358,4.73655231216387,1.52552838186867,1.3807198521202,2.18807844327902,1.0529445968896,5.24433178629152,1.56302802246618,1.30953347240711,2.29280684514135,0.887136517302272,0.810451015420736,2.34323429584154,0.826747186004736,1.58539525484767,0,2.74128883428591,0,0.879356221798103,2.55524855279191,1.07140367175657,1.68141861109412,1.82089681270989,1.59363533945908,0.709618961301111,3.45701962667338,3.94422421706063,1.42736439251347,0.920818829879887,4.60955979447476,4.3380246737907,1.02041020705668,1.41404030924402,1.68163297988273,0,1.72742072974897,0.9555033757741,1.00067161847319,3.00225862292181,1.51113852978563,1.04314963381548,0.801711364730253,0.828864656652147,0.17071847709395,0,1.29068207646083,1.77498001095848,1.619054690424,0,4.582137370881,7.13474687027936,1.91107787795487,15.6597604516909,1.57040373784389,2.07260472469858,0.647428837187895,1.64260490969995,1.1598144313382,0.971421986118279,1.63757624423474,3.97901550322736,0,2.14597555874024,2.52863188514487,5.1327366812669,0.848915739187391,0.437119121007915,3.29222107453066,0,0.707029641304878,0.392616934229891,0.891139200981258,0.4226557275834,1.35941691750254,1.4097587696978,0.773494655682926,3.39799930144758,2.67830907908486,5.29342307573538,4.97496473472843,0,2.75237570042724,0.573358332605805,1.89325874631822,1.22384682343646,0.436350690340377,1.0580536810308,0.743990036333503,2.31087814315709,1.73050624849516,1.7663299476911,2.62237372712869,1.26698501011437,1.52983244612973,2.40495664739004,5.23800927348616,1.50424523575425,1.28823786971007,0.803892390468535,0,1.03432995861895,2.34557380091079,0.952257725854961,0.839655827868079,0.744896571550295,3.13969215225718,2.5458863311266,1.21270313374932,2.17716747896961,3.42233301085281,1.21233695426258,1.5061663132462,0.332660356546013,1.46525883499754,2.88163833869832,0,3.32353247794371,0,0.488965776731466,0,0,1.00636896795513,4.16739039994203 | |||
|short_description=p4@C12orf52 | |||
}} |
Revision as of 16:01, 11 January 2014
Short description: | p4@C12orf52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C12orf52_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000436053_5end |
EntrezGene: | C12orf52 |
HGNC: | 25925 |
UniProt: | Q96K30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.92e-40 | 253 |
embryonic cell | 3.48e-15 | 250 |
squamous epithelial cell | 1.03e-13 | 63 |
endodermal cell | 5.64e-10 | 58 |
mesothelial cell | 5.58e-08 | 19 |
endo-epithelial cell | 1.66e-07 | 42 |
lining cell | 2.19e-07 | 58 |
barrier cell | 2.19e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 4.78e-10 | 101 |
primordium | 3.28e-08 | 160 |
trunk | 3.41e-08 | 199 |
subdivision of trunk | 1.06e-07 | 112 |
larynx | 2.36e-07 | 9 |
respiratory primordium | 2.92e-07 | 38 |
endoderm of foregut | 2.92e-07 | 38 |
abdomen element | 7.77e-07 | 54 |
abdominal segment element | 7.77e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.08e-27 | 235 |
disease of cellular proliferation | 8.84e-27 | 239 |
carcinoma | 3.76e-21 | 106 |
cell type cancer | 9.11e-19 | 143 |
organ system cancer | 6.25e-11 | 137 |