FFCP PHASE1:Hg19::chr11:65658098..65658151,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11007 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24926 | |||
|TSSclassifier=strong | |||
|UniProt=Q15834 | |||
|association_with_transcript=223bp_to_ENST00000312579,NM_006848,uc001ogf.2_5end | |||
|description=CAGE_peak_1_at_CCDC85B_5end | |||
|id=chr11:65658098..65658151,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.42e-17!119;CL:0000055!2.45e-17!180;CL:0000115!1.66e-11!35;CL:0000183!2.00e-11!59;CL:0002139!3.38e-11!24;CL:0000057!7.13e-11!75;CL:0002078!3.48e-10!44;CL:0000071!3.49e-10!18;CL:0002546!3.49e-10!18;CL:0000187!4.96e-10!54;CL:0000680!1.30e-09!57;CL:0000056!1.30e-09!57;CL:0000355!1.30e-09!57;CL:0000213!3.40e-09!57;CL:0000215!3.40e-09!57;CL:0000393!1.66e-08!60;CL:0000211!1.66e-08!60;CL:0000192!2.11e-08!42;CL:0000514!2.11e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.40e-11;24!CL:0000071;3.50e-10;18!CL:0000115;3.94e-10;36!CL:0002078;1.91e-07;45!CL:0000192;5.89e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.90e-18,121;CL:0000115,4.65e-12,36;CL:0002139,3.38e-11,24;CL:0000057,4.08e-11,76;CL:0002078,1.09e-10,45;CL:0000187,2.08e-10,55;CL:0000071,3.49e-10,18;CL:0002546,3.49e-10,18;CL:0000680,5.55e-10,58;CL:0000056,5.55e-10,58;CL:0000355,5.55e-10,58;CL:0000213,1.20e-09,58;CL:0000215,1.20e-09,58;CL:0000393,7.48e-09,61;CL:0000211,7.48e-09,61;CL:0000192,8.83e-09,43;CL:0000514,8.83e-09,43 | |||
|ontology_enrichment_development_v019=CL:0002546;3.50e-10;18!CL:0000514;5.89e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!7.83e-18!69;UBERON:0002049!4.37e-16!79;UBERON:0007798!4.37e-16!79;UBERON:0001981!8.61e-16!60;UBERON:0007500!8.61e-16!60;UBERON:0004537!8.61e-16!60;UBERON:0006965!8.61e-16!60;UBERON:0004872!3.95e-15!84;UBERON:0004535!6.95e-13!110;UBERON:0001009!8.73e-13!113;UBERON:0000914!1.12e-12!83;UBERON:0002329!1.12e-12!83;UBERON:0003077!1.12e-12!83;UBERON:0003059!1.12e-12!83;UBERON:0007282!1.12e-12!83;UBERON:0009618!1.12e-12!83;UBERON:0007285!1.12e-12!83;UBERON:0004290!3.39e-12!70;UBERON:0003914!7.22e-12!118;UBERON:0001637!3.01e-11!42;UBERON:0003509!3.01e-11!42;UBERON:0004572!3.01e-11!42;UBERON:0000025!2.90e-10!194;UBERON:0001986!3.49e-10!18;UBERON:0004638!3.49e-10!18;UBERON:0004852!3.49e-10!18;UBERON:0006914!4.08e-10!25;UBERON:0000477!4.39e-10!286;UBERON:0000483!1.09e-09!309;UBERON:0000487!1.15e-09!22;UBERON:0000119!1.30e-09!312;UBERON:0001134!1.92e-09!61;UBERON:0002036!1.92e-09!61;UBERON:0003082!1.92e-09!61;UBERON:0000486!2.29e-09!82;UBERON:0004573!3.02e-09!33;UBERON:0004571!3.02e-09!33;UBERON:0004111!6.65e-09!241;UBERON:0002385!8.98e-09!63;UBERON:0001015!8.98e-09!63;UBERON:0000383!8.98e-09!63;UBERON:0000490!1.67e-08!138;UBERON:0005256!2.32e-08!143;UBERON:0002100!2.49e-07!216;UBERON:0000475!5.27e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.50e-10;18!UBERON:0001986;3.50e-10;18!UBERON:0004852;3.50e-10;18!UBERON:0006914;4.06e-10;25!UBERON:0000487;1.14e-09;22!UBERON:0007500;7.53e-09;56!UBERON:0001981;7.53e-09;56!UBERON:0004537;7.53e-09;56!UBERON:0001637;1.14e-08;42!UBERON:0003509;1.14e-08;42!UBERON:0004572;1.14e-08;42!UBERON:0004573;1.28e-08;33!UBERON:0004571;1.28e-08;33!UBERON:0000055;2.98e-08;65!UBERON:0003914;8.85e-08;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.46e-17,68;UBERON:0002049,8.04e-16,78;UBERON:0007798,8.04e-16,78;UBERON:0007500,1.58e-15,59;UBERON:0001981,1.58e-15,59;UBERON:0004537,1.58e-15,59;UBERON:0006965,1.58e-15,59;UBERON:0007503,2.25e-15,78;UBERON:0004872,7.20e-15,83;UBERON:0007524,3.72e-13,73;UBERON:0003077,8.64e-13,72;UBERON:0007285,8.64e-13,72;UBERON:0004535,1.21e-12,109;UBERON:0002329,1.41e-12,71;UBERON:0003059,1.41e-12,71;UBERON:0007282,1.41e-12,71;UBERON:0004290,1.41e-12,71;UBERON:0009618,1.41e-12,71;UBERON:0001009,1.51e-12,112;UBERON:0003914,1.54e-11,117;UBERON:0001637,3.01e-11,42;UBERON:0003509,3.01e-11,42;UBERON:0004572,3.01e-11,42;UBERON:0000490,5.41e-11,148;UBERON:0004638,3.49e-10,18;UBERON:0001986,3.49e-10,18;UBERON:0004852,3.49e-10,18;UBERON:0006914,4.08e-10,25;UBERON:0000025,6.82e-10,192;UBERON:0000483,7.28e-10,306;UBERON:0001134,8.37e-10,62;UBERON:0002036,8.37e-10,62;UBERON:0003082,8.37e-10,62;UBERON:0000119,8.72e-10,309;UBERON:0000486,1.07e-09,83;UBERON:0000487,1.15e-09,22;UBERON:0004573,3.02e-09,33;UBERON:0004571,3.02e-09,33;UBERON:0002385,4.04e-09,64;UBERON:0001015,4.04e-09,64;UBERON:0000383,4.04e-09,64;UBERON:0004111,8.46e-09,240;UBERON:0003104,4.89e-08,160;UBERON:0009142,4.89e-08,160;UBERON:0005256,5.45e-08,122 | |||
|phase1_expression=148.612914243315,268.910258007075,142.786811349219,269.197172569921,242.699874274017,245.127125272204,491.401763646523,169.300926078391,255.700730007642,98.047840664102,671.982524757448,64.8770875226612,71.2170841216825,177.357183791747,390.717505983213,123.035501800675,122.346989188867,139.489227263988,153.69883161901,141.219853614076,332.113125345644,131.024073577841,42.6491620825275,87.462757621573,89.2608167519048,52.2667695315987,56.4031049521127,57.0653164524175,60.1847343578823,51.0493099469293,47.3737337347193,182.045402446828,174.097021053829,118.321283253372,47.7197955574658,65.8243546416762,91.0161361938026,47.6436051337415,60.9655120309231,78.3409243284225,9.62836539231675,9.71680998056939,8.24241816429397,21.8097358169347,25.3176882271502,22.8029017516547,17.664606804832,23.0254017292222,15.7950249156503,20.1384674625505,16.6504459243915,16.553756092201,26.200671735983,23.2374486090177,25.7310324529249,20.1419303310587,16.3743690034707,14.6070264889305,16.5285301880287,20.8603867599461,18.5407766481722,23.0895910130701,18.949047474055,20.0325632750366,13.6398342155434,17.0215567407342,16.8162007228805,23.1148772036204,22.9452484104889,20.8501290916912,27.2429776185016,11.7848843516021,13.2914202725171,52.3913110053616,39.9696083934282,50.9470508585353,44.7067951963051,48.2067826021235,35.6810802467518,71.5381986790534,55.8955862929443,56.4432235132719,63.3586480060762,50.2447522361161,55.1495737395404,45.2334035920498,56.8562301591138,47.1297000762676,50.2394103316495,51.5189027449097,39.8449078376614,54.0258214221264,38.6095960406481,55.5119580031909,76.7896731284704,87.7069002301007,37.5715660917421,69.5629050066022,72.5773291468268,71.0542605410382,60.2956193272142,64.3889015799237,62.3445530905316,77.653088448966,53.9128810678952,45.8575161788096,35.475306153217,112.976543998045,109.770089340537,130.892572064526,166.086360689295,79.9856516628745,43.5962495696458,34.7803076516627,62.7213142829861,92.8003516693067,63.231381444317,48.7950972585335,33.6516190385939,64.3502136934675,74.8745971934881,107.401081022666,65.0484514415978,64.3772654106725,78.7063577279779,65.3505215641487,87.860695670552,53.2241802113294,77.0227763856501,64.5916841317283,136.531845135819,166.333813206502,115.843481030238,339.752803241492,243.148886658406,303.453457222926,34.9925816702484,132.85131959262,59.6514696305268,90.4655941647261,73.2542112680671,62.4115294746601,133.33207551507,124.954357218353,74.6459005405772,82.1892360052541,117.003005256601,41.4973686291295,58.343480899573,67.6052652419808,214.663399956042,357.857591564148,368.663212707265,401.368638766047,337.697046148974,408.550292281,300.534761879934,156.858972815783,141.594972549311,119.495258756987,398.801023938055,209.074829072591,407.095511990347,160.301103030799,492.56630431211,111.446060898532,306.482593634722,239.074173066093,361.827264419484,221.178898679374,264.909721723369,23.7204751384914,27.1446184903828,78.0608353335137,225.128294117979,106.496260309912,52.036808059595,117.603014507014,172.014165366203,181.659542446108,96.0740961567345,193.140690410636,75.0018595313437,143.870997770427,167.058064981955,56.1536056562696,80.6646294271998,136.843716190937,195.10004801895,194.530891146657,241.957413813366,194.0017917595,185.182648357142,159.552116413754,116.367877615289,188.673511390876,211.714525629143,182.952440021436,224.023837926373,151.99694744365,386.616560297136,125.915413237642,154.77160908162,52.9192460574789,247.144400555912,194.313262536578,287.255168629413,89.8382890627367,134.721616402335,81.5789225286928,87.1040113765799,171.652106960278,114.285254925429,94.2964376567003,134.190253415076,75.6117968440873,134.560504127615,177.965810842101,91.957848743657,108.464504125423,106.147868162468,135.007811625038,170.40839527204,29.1823888276578,19.6377206825401,26.3860227757884,32.6889532427316,31.144495555549,31.4885585176395,30.0617059544574,52.4827369821307,55.4765585795262,167.400999592903,232.209978687632,198.914286747572,289.765587091955,487.26865012697,86.9554980292853,92.2158254727216,81.9437501603839,97.720459840901,106.978807049371,98.7045775502162,85.2133867572239,83.3941226782721,95.0325477657584,427.392008227671,295.910142725271,153.928680237944,344.000384642168,11.4079531339648,19.6565443335525,63.2145200149102,51.6511826315141,20.6620576752431,38.6027573171682,43.1318621655898,76.4331922151813,58.5078619435692,56.1085977660689,115.010331774545,504.368370860596,129.898207822746,56.6899680328126,31.8177561379077,185.51088537298,225.473944624809,147.256713829579,94.0343233571537,97.8674224788155,26.0990026452641,36.5046653617211,42.3598812522876,43.1175636339174,16.6302306916871,18.8560879332374,50.5110068044064,69.7521452433509,95.4622871121376,19.7065295158377,77.7467672336786,47.4781384588368,45.9742651400107,47.4671549683189,59.1800374803015,178.770583161274,137.144413235755,218.972730909063,182.415972055696,162.185251235715,64.5967737745107,80.9586428973504,81.0885728029901,75.6117726813995,55.5868377758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| |||
|short_description=p1@CCDC85B | |||
}} |
Revision as of 08:44, 11 January 2014
Short description: | p1@CCDC85B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC85B_5end |
Coexpression cluster: | NA |
Association with transcript: | 223bp_to_ENST00000312579, NM_006848, uc001ogf.2_5end |
EntrezGene: | CCDC85B |
HGNC: | 24926 |
UniProt: | Q15834 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.90e-18 | 121 |
endothelial cell | 4.65e-12 | 36 |
endothelial cell of vascular tree | 3.38e-11 | 24 |
fibroblast | 4.08e-11 | 76 |
meso-epithelial cell | 1.09e-10 | 45 |
muscle cell | 2.08e-10 | 55 |
blood vessel endothelial cell | 3.49e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.49e-10 | 18 |
muscle precursor cell | 5.55e-10 | 58 |
myoblast | 5.55e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.55e-10 | 58 |
lining cell | 1.20e-09 | 58 |
barrier cell | 1.20e-09 | 58 |
electrically responsive cell | 7.48e-09 | 61 |
electrically active cell | 7.48e-09 | 61 |
smooth muscle cell | 8.83e-09 | 43 |
smooth muscle myoblast | 8.83e-09 | 43 |