FFCP PHASE1:Hg19::chr11:34073269..34073287,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4076 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6743 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000389645,ENST00000526477,ENST00000528856,ENST00000531232_5end | |||
|description=CAGE_peak_2_at_CAPRIN1_5end | |||
|id=chr11:34073269..34073287,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.94e-21!180;CL:0000057!4.28e-13!75;CL:0002620!2.07e-08!23;CL:0000136!3.32e-08!15;CL:0000680!2.90e-07!57;CL:0000056!2.90e-07!57;CL:0000355!2.90e-07!57;CL:0000359!4.67e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.21e-08;23!CL:0000136;3.25e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.32e-13,76;CL:0002620,2.07e-08,23;CL:0000136,3.32e-08,15;CL:0000680,1.65e-07,58;CL:0000056,1.65e-07,58;CL:0000355,1.65e-07,58;CL:0000359,4.67e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!4.00e-09!45;UBERON:0002416!4.00e-09!45;UBERON:0000914!4.28e-09!83;UBERON:0002329!4.28e-09!83;UBERON:0003077!4.28e-09!83;UBERON:0003059!4.28e-09!83;UBERON:0007282!4.28e-09!83;UBERON:0009618!4.28e-09!83;UBERON:0007285!4.28e-09!83;UBERON:0001637!2.96e-08!42;UBERON:0003509!2.96e-08!42;UBERON:0004572!2.96e-08!42;UBERON:0002097!7.83e-08!40;UBERON:0004573!9.36e-08!33;UBERON:0004571!9.36e-08!33;UBERON:0004290!3.74e-07!70;UBERON:0001981!7.16e-07!60;UBERON:0007500!7.16e-07!60;UBERON:0004537!7.16e-07!60;UBERON:0006965!7.16e-07!60;UBERON:0003102!8.61e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.36e-07;33!UBERON:0004571;3.36e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.63e-09,46;UBERON:0002416,2.63e-09,46;UBERON:0001637,2.96e-08,42;UBERON:0003509,2.96e-08,42;UBERON:0004572,2.96e-08,42;UBERON:0002097,5.18e-08,41;UBERON:0004573,9.36e-08,33;UBERON:0004571,9.36e-08,33;UBERON:0007524,1.45e-07,73;UBERON:0003077,2.05e-07,72;UBERON:0007285,2.05e-07,72;UBERON:0002329,2.20e-07,71;UBERON:0003059,2.20e-07,71;UBERON:0007282,2.20e-07,71;UBERON:0004290,2.20e-07,71;UBERON:0009618,2.20e-07,71;UBERON:0003102,4.26e-07,99;UBERON:0007500,9.16e-07,59;UBERON:0001981,9.16e-07,59;UBERON:0004537,9.16e-07,59;UBERON:0006965,9.16e-07,59 | |||
|phase1_expression=67.221000330106,76.647987552972,80.9078279510874,78.0571727154417,79.5590748080572,65.4253893075277,50.6599756336621,101.075179748293,92.9820836391425,25.0648615231539,16.7472280313383,50.2415155899396,33.7621732132421,47.6500458896179,57.0003486252015,57.8199625948527,57.2559801622778,62.0763576829267,67.8226590318805,26.717269602663,22.8480774193563,14.418917187992,41.7904541211343,62.2778634081623,47.9572883252147,22.3891278841497,27.0110939290322,26.8403764279646,28.71559220997,32.6254988382631,27.7120860735776,27.5826367343678,37.9519457660595,29.580320813343,42.2196243162644,28.1495080325095,41.9848628248832,28.8077612436576,29.8811226730511,33.8536958316729,32.467743764789,37.5716652582016,32.7120970895417,28.7888512783538,34.7645868193705,35.1746888722333,24.4050488750969,35.360438369877,25.7056287842936,18.9876978932619,24.3352671202646,25.5400808279672,17.5820297175675,34.2106882299428,36.5651513804723,20.5184150101439,30.2925826564209,28.3151590400807,19.2832852193669,31.1301156263811,23.6554736545645,31.335873517738,28.9222303551366,35.3766542942136,18.5733912722294,30.0714169086304,15.5705562248894,22.3611312078501,30.2460092683717,27.8001721222549,27.848377121135,33.881542510856,17.4054313092486,35.4908881004062,32.9536664945817,27.4652825615972,34.035575237388,34.8410391392295,48.8605783559124,29.3563126053486,34.8104185098408,35.9848382916329,8.79981222306614,15.2918811153397,12.4531295540898,23.4701622411579,20.4201953388366,16.66782075868,11.2377628373427,20.989182599778,24.4761576717063,25.8384363323213,21.4073007750128,74.0159440042545,38.1145822827445,42.6682217335625,29.506465517075,31.047850257184,32.8962398399215,25.2451608039924,22.8145586643513,16.0972253949809,23.3792074089494,27.0727410230972,22.9792607830373,23.4825928258638,29.7884250141517,21.6474330336391,19.6389614815416,25.8167510227772,25.4242016362981,37.6744011455568,17.9426741426093,29.4294910898684,30.3153019034433,32.2931626688064,19.1610246800961,20.6176467289578,28.0851858141648,21.6624481740386,17.5792532541233,19.9594929334159,32.9759510780322,28.7969875097441,36.2299107001803,22.7306161962256,32.8451198768419,31.4506519430583,35.5695460392065,32.1510176619814,158.474463104075,52.9853679165873,45.0076217689227,63.2518516672991,82.7207552549218,64.4567009375666,91.4578839108764,36.4976152726977,45.7548515074088,48.5587380443015,51.3833496304787,31.5004676571999,10.2002680721912,22.2470665670658,72.3740687849944,76.0946951997798,60.6288299966025,56.522277960366,65.2074198289346,82.0921077938338,60.0262470247449,46.4526681357307,61.4438687845442,79.1431118693613,44.0474408020401,48.971011465332,57.6826107641597,53.2338523888818,65.8167585970414,67.2788431656987,49.1451766873159,53.9793195060144,45.6396047615077,60.2967451767225,50.2288007686691,43.3103682177787,47.3756976241218,49.6616628931451,58.2603222370356,55.0574082549515,45.2508307508106,50.076558625704,50.4114343392823,13.9550096685611,64.1093817686961,64.7081914606003,97.9827938017819,90.0666989151275,67.7416609998862,68.9633448175038,84.3317066264669,46.3734991024261,102.388430646523,54.827243532363,53.9424280274414,58.1212522156537,74.9028701823999,20.3859645695403,64.6171359038763,74.1613368007784,41.6961818739525,39.5754260429488,40.630109036401,45.9274137916353,67.5750306853697,42.3778394725599,72.3280468230358,62.9641514359488,79.1254173691382,48.2385521827154,17.965453545406,47.1341119071385,52.9251339058408,97.5265686504324,86.0396136926442,72.3311198085686,76.1706958656446,41.9699077692078,118.397159554649,74.53152869768,72.9045739988893,96.3292418430931,75.125293814822,110.270151139529,73.3300413946464,93.5020880616615,80.7752772786337,96.4297017612517,61.489332293056,80.9846744662248,118.218194308033,75.1610652778196,77.4891906858929,61.2636904527651,41.4574103298069,60.2289650316908,37.3239540756562,40.421579338053,31.2561706319004,45.7145252617784,32.8017106138317,36.8627132666588,76.6602708416098,75.9024307067605,67.6861114627155,65.0115099244771,58.4722380152364,57.8520252194837,82.1007440680355,85.7999266385196,55.9190441753237,69.2856632213852,73.791162543551,63.5055461434374,81.8243509572693,81.1816501156884,33.2169954581092,16.8290128564135,21.8134226005642,29.4017422771084,41.8291614912042,27.5191620669735,35.4473944008842,54.7414243274167,54.2379013975131,33.1125873876154,53.7776398502265,25.8524032492525,34.1798506199545,34.9058438247657,11.077482380551,19.758760920312,38.9694623468238,44.9809971303298,77.3723295014065,32.7711836417638,27.31614524202,37.2898138379813,47.4122638775565,48.0752250773129,41.8568910348575,48.9068914141007,51.1291198273225,35.6188569149753,64.6731193565609,55.7176132162579,43.4358835108814,47.0826980392618,42.5554773873384,30.0524575116526,26.2384333359414,23.8427332871888,29.6887104038941,26.5109110195398,49.972842807937,56.5342869826251,83.2243875191334,49.6110093465845,42.6734094718793,44.4507725608998,57.7369393913768,37.7881754243866,45.3398471586611,47.3031943545128,70.97017195102,39.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| |||
|short_description=p2@CAPRIN1 | |||
}} |
Revision as of 07:11, 11 January 2014
Short description: | p2@CAPRIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAPRIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000389645, ENST00000526477, ENST00000528856, ENST00000531232_5end |
EntrezGene: | CAPRIN1 |
HGNC: | 6743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.32e-13 | 76 |
skin fibroblast | 2.07e-08 | 23 |
fat cell | 3.32e-08 | 15 |
muscle precursor cell | 1.65e-07 | 58 |
myoblast | 1.65e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.65e-07 | 58 |
vascular associated smooth muscle cell | 4.67e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
integument | 2.63e-09 | 46 |
integumental system | 2.63e-09 | 46 |
artery | 2.96e-08 | 42 |
arterial blood vessel | 2.96e-08 | 42 |
arterial system | 2.96e-08 | 42 |
skin of body | 5.18e-08 | 41 |
systemic artery | 9.36e-08 | 33 |
systemic arterial system | 9.36e-08 | 33 |
dense mesenchyme tissue | 1.45e-07 | 73 |
paraxial mesoderm | 2.05e-07 | 72 |
presumptive paraxial mesoderm | 2.05e-07 | 72 |
somite | 2.20e-07 | 71 |
presomitic mesoderm | 2.20e-07 | 71 |
presumptive segmental plate | 2.20e-07 | 71 |
dermomyotome | 2.20e-07 | 71 |
trunk paraxial mesoderm | 2.20e-07 | 71 |
surface structure | 4.26e-07 | 99 |
epithelial tube open at both ends | 9.16e-07 | 59 |
blood vessel | 9.16e-07 | 59 |
blood vasculature | 9.16e-07 | 59 |
vascular cord | 9.16e-07 | 59 |