FFCP PHASE1:Hg19::chr11:33913558..33913630,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4005 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6642 | |||
|TSSclassifier=weak | |||
|UniProt=P25791 | |||
|association_with_transcript=205bp_to_ENST00000257818,NM_005574,uc010rem.1_5end | |||
|description=CAGE_peak_4_at_LMO2_5end | |||
|id=chr11:33913558..33913630,- | |||
|ontology_enrichment_celltype=CL:0000763!1.74e-48!112;CL:0000049!1.74e-48!112;CL:0000037!1.69e-35!172;CL:0000566!1.69e-35!172;CL:0002032!8.99e-34!165;CL:0000837!8.99e-34!165;CL:0000988!5.56e-32!182;CL:0000839!6.98e-20!70;CL:0002194!2.36e-19!63;CL:0000576!2.36e-19!63;CL:0000040!2.36e-19!63;CL:0000559!2.36e-19!63;CL:0000766!5.14e-19!76;CL:0002009!2.22e-18!65;CL:0000557!5.21e-18!71;CL:0002057!1.42e-14!42;CL:0000860!4.89e-13!45;CL:0002087!2.79e-11!119;CL:0002031!2.85e-11!124;CL:0000738!4.97e-11!140 | |||
|ontology_enrichment_celltype_v019=CL:0000763;3.53e-15;100!CL:0000875;2.27e-08;3!CL:0002396;2.27e-08;3!CL:0000764;4.09e-07;2!CL:0000558;4.09e-07;2!CL:0000988;4.15e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.09e-48,108;CL:0000049,1.09e-48,108;CL:0002032,1.75e-34,161;CL:0000837,1.75e-34,161;CL:0000037,3.62e-34,168;CL:0000988,9.85e-32,177;CL:0000839,2.05e-10,66;CL:0002194,2.46e-09,59;CL:0000576,2.46e-09,59;CL:0000040,2.46e-09,59;CL:0000559,2.46e-09,59;CL:0000134,3.24e-09,354;CL:0000557,6.59e-09,67;CL:0002009,6.69e-09,61;CL:0002320,8.56e-09,361;CL:0000875,1.75e-08,3;CL:0002396,1.75e-08,3;CL:0000219,6.36e-08,386;CL:0000764,4.10e-07,2;CL:0000765,4.10e-07,2;CL:0000050,4.10e-07,2;CL:0000038,4.10e-07,2;CL:0000558,4.10e-07,2;CL:0000547,4.10e-07,2;CL:0000549,4.10e-07,2;CL:0000550,4.10e-07,2;CL:0000552,4.10e-07,2;CL:0000766,5.94e-07,72;CL:0002393,7.44e-07,9;CL:0002397,7.44e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000049;7.32e-17;108 | |||
|ontology_enrichment_disease=DOID:8692!3.27e-41!31;DOID:1240!7.25e-32!39;DOID:2531!3.21e-27!51;DOID:0060083!3.21e-27!51;DOID:1036!1.21e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.32e-79;31!DOID:1240;2.74e-49;39!DOID:2531;3.52e-30;51!DOID:0060083;3.52e-30;51!DOID:1036;2.35e-16;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.22e-82,31;DOID:1240,2.96e-63,39;DOID:2531,2.74e-49,51;DOID:0060083,2.74e-49,51;DOID:1036,2.38e-16,8;DOID:0050686,9.66e-15,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.92e-21!102;UBERON:0003061!2.92e-21!102;UBERON:0002193!7.48e-19!112;UBERON:0002371!1.11e-16!80;UBERON:0007023!1.24e-14!115;UBERON:0001474!1.31e-14!86;UBERON:0002405!2.29e-12!115;UBERON:0004765!2.74e-11!101;UBERON:0001434!2.74e-11!101;UBERON:0001049!3.27e-10!57;UBERON:0005068!3.27e-10!57;UBERON:0006241!3.27e-10!57;UBERON:0007135!3.27e-10!57;UBERON:0001017!1.07e-08!82;UBERON:0005743!2.03e-08!86;UBERON:0000955!3.03e-08!69;UBERON:0006238!3.03e-08!69;UBERON:0002780!3.26e-08!41;UBERON:0001890!3.26e-08!41;UBERON:0006240!3.26e-08!41;UBERON:0002616!5.64e-08!59;UBERON:0000073!5.88e-08!94;UBERON:0001016!5.88e-08!94;UBERON:0002020!6.29e-08!34;UBERON:0003528!6.29e-08!34;UBERON:0003080!6.95e-08!42;UBERON:0001893!9.81e-08!34;UBERON:0002791!2.71e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.01e-08,76;UBERON:0002384,3.20e-08,371;UBERON:0002405,1.09e-07,93;UBERON:0001474,1.75e-07,82;UBERON:0002390,4.59e-07,98;UBERON:0003061,4.59e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.77408061658038,0,0,0,0.0774672005803016,0,23.4880351467878,0,0,0.868043482863407,0.223915474239924,0,0.515151135268373,0.726991193897824,0.377875943688809,0,0,0,0,0.28769239232215,0.512321413058201,0.945928919554341,0.344745680736619,0,0,0.564727018627814,0,0.224723484445085,0,0.320929027076094,1.27867425159808,0.659702600373432,1.39624560335142,1.70489900213078,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0,0,0.316462387440884,0.633765858935825,1.70083439972035,1.46761051855863,0.898629049171961,0.901061357049038,1.6072558669708,2.85012743741249,2.98375015798635,2.92262646023414,0,0,0,0,0.400395987036012,0,0,0,0,0,0,5.28685314316103,3.36305137788922,10.5353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,1.62273696827342,1.21890816109487,2.92507513141503,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,1.8720341211139,1.93220510975347,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5304450741581,29.019335063764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0.714695326373367,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,13.3718178859987,10.7243007274125,13.5471092943285,11.0371459693349,15.4438447962402,10.72702991456,10.3408731210195,15.038068625404,2.53937666702405,21.6793901389994,14.5295789177554,14.4787720814711,37.7855879231341,31.6457987237712,23.9333435444885,21.6903884225481,16.9987642999775,43.7097693015531,32.0027237264052,8.38412603275548,14.9882385599019,9.86909035614947,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0.276283915531148,0,0,2.46169610922139,0,0,0,54.7382436142753,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0.344743373241465,0,0,0,1.80894657938112,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,4.08148666627064,25.2641756488238,6.54227415789824,8.82281404429828,7.55197141391292,2.84630599086278,36.3964765865067,0,0,0,0,0,0,0,0,0,0,0.808813595768125,0.802577647298789,0,0,0,0,0.394584402849391,0,0.61214552326098,0.189559738885464,3.75808548536231,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0,0,0,3.14882371451584,17.8845223293761,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,2.03215996957883,0,0.817220436669454,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,16.6647817121158,0,0,0,6.62534444561107,0.387848869084652,2.11572162788304,0,0,0,0.78602152549833,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,1.33114861844223,0.620964029413834,41.2278932109968,0,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,15.0435338868739,0.344429959321631,0,0,0,0,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,1.43670473151436,0,0,0.207471757392654,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,1.56215619722769,1.03343398250592,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,1.15233987555779,0,0.475788130837822,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.45178432815584,0,4.52888530700021,0.154348316215889,0,0,0,0.235676547101626,0.196308467114945,2.0793248022896,0,0,0.0939839179798536,1.74036297528658,0,0,0,0,0,0,1.72007499781742,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,2.58582489654738,0.852935927603924,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,1.54909721933551,0.215166616178029,0,0,0,0,0,0,0,0,0,0,3.8468219076388 | |||
|short_description=p4@LMO2 | |||
}} |
Revision as of 07:10, 11 January 2014
Short description: | p4@LMO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LMO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 205bp_to_ENST00000257818, NM_005574, uc010rem.1_5end |
EntrezGene: | LMO2 |
HGNC: | 6642 |
UniProt: | P25791 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.01e-08 | 76 |
connective tissue | 3.20e-08 | 371 |
immune system | 1.09e-07 | 93 |
bone element | 1.75e-07 | 82 |
hematopoietic system | 4.59e-07 | 98 |
blood island | 4.59e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.22e-82 | 31 |
leukemia | 2.96e-63 | 39 |
hematologic cancer | 2.74e-49 | 51 |
immune system cancer | 2.74e-49 | 51 |
chronic leukemia | 2.38e-16 | 8 |
organ system cancer | 9.66e-15 | 137 |