FFCP PHASE1:Hg19::chr11:33891450..33891499,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4005 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6642 | |||
|TSSclassifier=strong | |||
|UniProt=P25791 | |||
|association_with_transcript=9bp_to_NM_001142315,uc010rel.1_5end | |||
|description=CAGE_peak_2_at_LMO2_5end | |||
|id=chr11:33891450..33891499,- | |||
|ontology_enrichment_celltype=CL:0000766!1.03e-23!76;CL:0000763!4.66e-23!112;CL:0000049!4.66e-23!112;CL:0000557!5.09e-22!71;CL:0002009!2.59e-21!65;CL:0002194!4.27e-21!63;CL:0000576!4.27e-21!63;CL:0000040!4.27e-21!63;CL:0000559!4.27e-21!63;CL:0002057!4.38e-21!42;CL:0000839!2.87e-20!70;CL:0000860!4.04e-18!45;CL:0000037!2.19e-13!172;CL:0000566!2.19e-13!172;CL:0002032!2.26e-12!165;CL:0000837!2.26e-12!165;CL:0002139!3.21e-12!24;CL:0000115!5.57e-12!35;CL:0000988!1.24e-11!182;CL:0000738!1.62e-10!140;CL:0002031!5.43e-09!124;CL:0002087!5.87e-09!119;CL:0002078!1.28e-08!44;CL:0000071!1.48e-08!18;CL:0002546!1.48e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.37e-18;48!CL:0000860;3.03e-17;33!CL:0002057;3.03e-17;33!CL:0000473;6.02e-16;39!CL:0000234;6.02e-16;39!CL:0002139;1.80e-14;24!CL:0000766;1.93e-13;69!CL:0000115;5.12e-13;36!CL:0000763;4.83e-10;100!CL:0000071;5.64e-10;18!CL:0002078;6.77e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.76e-32,72;CL:0000557,2.09e-30,67;CL:0002009,1.76e-29,61;CL:0002194,2.80e-29,59;CL:0000576,2.80e-29,59;CL:0000040,2.80e-29,59;CL:0000559,2.80e-29,59;CL:0000763,1.03e-28,108;CL:0000049,1.03e-28,108;CL:0000839,1.07e-27,66;CL:0000473,2.28e-26,48;CL:0000234,2.28e-26,48;CL:0000860,2.63e-25,42;CL:0002057,2.63e-25,42;CL:0000037,1.93e-17,168;CL:0002032,4.70e-16,161;CL:0000837,4.70e-16,161;CL:0000738,1.88e-15,136;CL:0000115,2.31e-15,36;CL:0000988,6.56e-15,177;CL:0002139,1.62e-14,24;CL:0002087,5.82e-13,115;CL:0002031,9.31e-13,120;CL:0002078,1.20e-10,45;CL:0000071,4.56e-10,18;CL:0002546,4.56e-10,18;CL:0002393,8.81e-08,9;CL:0002397,8.81e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.99e-18;42!CL:0002546;5.64e-10;18!CL:0000049;1.21e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.25e-32!115;UBERON:0003081!2.96e-25!216;UBERON:0002193!2.46e-23!112;UBERON:0002390!1.81e-20!102;UBERON:0003061!1.81e-20!102;UBERON:0002371!3.34e-18!80;UBERON:0002405!3.63e-16!115;UBERON:0001474!7.74e-15!86;UBERON:0000025!1.54e-13!194;UBERON:0001009!6.61e-13!113;UBERON:0004535!1.65e-12!110;UBERON:0000055!2.58e-12!69;UBERON:0001049!8.42e-12!57;UBERON:0005068!8.42e-12!57;UBERON:0006241!8.42e-12!57;UBERON:0007135!8.42e-12!57;UBERON:0004111!9.12e-12!241;UBERON:0004765!2.87e-11!101;UBERON:0001434!2.87e-11!101;UBERON:0001981!6.44e-11!60;UBERON:0007500!6.44e-11!60;UBERON:0004537!6.44e-11!60;UBERON:0006965!6.44e-11!60;UBERON:0001017!3.01e-10!82;UBERON:0004872!4.42e-10!84;UBERON:0002049!6.46e-10!79;UBERON:0007798!6.46e-10!79;UBERON:0005743!1.56e-09!86;UBERON:0002050!1.71e-09!605;UBERON:0005423!1.71e-09!605;UBERON:0000922!2.38e-09!612;UBERON:0002616!2.76e-09!59;UBERON:0000923!2.83e-09!604;UBERON:0005291!2.83e-09!604;UBERON:0006598!2.83e-09!604;UBERON:0002532!2.83e-09!604;UBERON:0002204!4.31e-09!167;UBERON:0000467!4.69e-09!625;UBERON:0003080!6.12e-09!42;UBERON:0000480!6.91e-09!626;UBERON:0000477!1.04e-08!286;UBERON:0000955!1.14e-08!69;UBERON:0006238!1.14e-08!69;UBERON:0002780!1.44e-08!41;UBERON:0001890!1.44e-08!41;UBERON:0006240!1.44e-08!41;UBERON:0001986!1.48e-08!18;UBERON:0004638!1.48e-08!18;UBERON:0004852!1.48e-08!18;UBERON:0000479!2.25e-08!787;UBERON:0000073!4.69e-08!94;UBERON:0001016!4.69e-08!94;UBERON:0000468!6.27e-08!659;UBERON:0001637!1.01e-07!42;UBERON:0003509!1.01e-07!42;UBERON:0004572!1.01e-07!42;UBERON:0002346!1.69e-07!90;UBERON:0003075!4.54e-07!86;UBERON:0007284!4.54e-07!86;UBERON:0001893!6.91e-07!34;UBERON:0002020!8.67e-07!34;UBERON:0003528!8.67e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.64e-10;18!UBERON:0001986;5.64e-10;18!UBERON:0004852;5.64e-10;18!UBERON:0007023;4.39e-08;114!UBERON:0000055;3.83e-07;65!UBERON:0000487;4.96e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.53e-33,114;UBERON:0003081,2.30e-33,203;UBERON:0002193,1.40e-31,108;UBERON:0002405,5.78e-28,93;UBERON:0002390,1.23e-27,98;UBERON:0003061,1.23e-27,98;UBERON:0002371,3.87e-25,76;UBERON:0001474,1.76e-21,82;UBERON:0004765,1.84e-17,90;UBERON:0001434,6.31e-15,100;UBERON:0000926,5.01e-14,315;UBERON:0004120,5.01e-14,315;UBERON:0006603,5.01e-14,315;UBERON:0000055,9.29e-13,68;UBERON:0001009,9.84e-13,112;UBERON:0000025,1.57e-12,192;UBERON:0004535,2.86e-12,109;UBERON:0000923,2.45e-11,560;UBERON:0010316,2.45e-11,560;UBERON:0005291,2.45e-11,560;UBERON:0006598,2.45e-11,560;UBERON:0010317,2.45e-11,560;UBERON:0002532,2.45e-11,560;UBERON:0002050,3.46e-11,564;UBERON:0001049,6.25e-11,56;UBERON:0005068,6.25e-11,56;UBERON:0006241,6.25e-11,56;UBERON:0007135,6.25e-11,56;UBERON:0004111,8.04e-11,240;UBERON:0007500,1.15e-10,59;UBERON:0001981,1.15e-10,59;UBERON:0004537,1.15e-10,59;UBERON:0006965,1.15e-10,59;UBERON:0004638,4.56e-10,18;UBERON:0001986,4.56e-10,18;UBERON:0004852,4.56e-10,18;UBERON:0005423,6.80e-10,581;UBERON:0002204,7.51e-10,167;UBERON:0000073,1.35e-09,53;UBERON:0002616,1.35e-09,53;UBERON:0002049,1.48e-09,78;UBERON:0007798,1.48e-09,78;UBERON:0004872,1.58e-09,83;UBERON:0000922,2.82e-09,592;UBERON:0000479,5.67e-09,773;UBERON:0002780,4.30e-08,41;UBERON:0001890,4.30e-08,41;UBERON:0003080,4.30e-08,41;UBERON:0006240,4.30e-08,41;UBERON:0001017,2.11e-07,81;UBERON:0002346,4.04e-07,86;UBERON:0000487,4.23e-07,22;UBERON:0003075,9.01e-07,82;UBERON:0007284,9.01e-07,82 | |||
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| |||
|short_description=p2@LMO2 | |||
}} |
Revision as of 07:10, 11 January 2014
Short description: | p2@LMO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_NM_001142315, uc010rel.1_5end |
EntrezGene: | LMO2 |
HGNC: | 6642 |
UniProt: | P25791 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data