FFCP PHASE1:Hg19::chr11:28724129..28724184,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000513853_5end | |||
|description=CAGE_peak_1_at_ENST00000513853_5end | |||
|id=chr11:28724129..28724184,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.23e-26!246;CL:0002321!7.50e-26!248;CL:0000066!1.92e-21!254;CL:0000222!2.75e-18!119;CL:0000076!4.45e-18!62;CL:0002139!2.78e-16!24;CL:0000071!6.68e-15!18;CL:0002546!6.68e-15!18;CL:0000213!1.60e-13!57;CL:0000215!1.60e-13!57;CL:0000359!4.42e-13!32;CL:1000413!5.16e-10!9;CL:0000115!1.16e-09!35;CL:0000548!1.51e-09!679;CL:0000004!1.51e-09!679;CL:0000255!1.51e-09!679;CL:0002076!1.98e-09!43;CL:0000012!2.95e-09!682;CL:0002368!3.66e-09!13;CL:0000192!4.70e-08!42;CL:0000514!4.70e-08!42;CL:0002078!7.23e-08!44;CL:0000223!7.47e-08!59;CL:0002544!6.65e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000071;4.02e-21;18!CL:0002139;1.50e-20;24!CL:1000413;3.77e-15;9!CL:0000115;2.68e-11;36!CL:0000359;3.90e-11;32!CL:0000076;5.55e-11;63!CL:0000213;1.68e-10;58!CL:0000215;1.68e-10;58!CL:0002544;3.55e-10;6!CL:0002543;1.60e-09;6!CL:0002368;6.29e-09;13!CL:0002595;8.67e-09;5!CL:0002078;2.15e-07;45!CL:0000077;5.88e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.68e-24,250;CL:0000071,2.61e-21,18;CL:0002546,2.61e-21,18;CL:0002139,1.30e-20,24;CL:0000222,5.24e-20,121;CL:0000213,1.80e-17,58;CL:0000215,1.80e-17,58;CL:0000076,4.77e-17,63;CL:0000066,3.33e-16,253;CL:1000413,3.62e-15,9;CL:0000115,3.22e-13,36;CL:0000359,5.54e-12,32;CL:0002078,9.92e-11,45;CL:0002544,3.58e-10,6;CL:0002543,1.13e-09,6;CL:0002368,6.16e-09,13;CL:0002595,8.22e-09,5;CL:0000192,1.02e-07,43;CL:0000514,1.02e-07,43;CL:0000077,5.60e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002546;4.02e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.60e-26!42;UBERON:0003509!1.60e-26!42;UBERON:0004572!1.60e-26!42;UBERON:0002049!2.39e-26!79;UBERON:0007798!2.39e-26!79;UBERON:0001981!7.55e-26!60;UBERON:0007500!7.55e-26!60;UBERON:0004537!7.55e-26!60;UBERON:0006965!7.55e-26!60;UBERON:0000055!9.71e-26!69;UBERON:0004573!3.46e-21!33;UBERON:0004571!3.46e-21!33;UBERON:0004872!1.99e-18!84;UBERON:0004535!2.57e-17!110;UBERON:0001009!2.57e-16!113;UBERON:0003914!1.71e-15!118;UBERON:0000487!3.75e-15!22;UBERON:0000490!4.94e-15!138;UBERON:0001986!6.68e-15!18;UBERON:0004638!6.68e-15!18;UBERON:0004852!6.68e-15!18;UBERON:0000947!9.31e-14!21;UBERON:0010191!9.31e-14!21;UBERON:0004111!1.72e-12!241;UBERON:0006914!1.88e-12!25;UBERON:0000477!4.20e-12!286;UBERON:0000025!1.09e-10!194;UBERON:0003915!5.16e-10!9;UBERON:0004700!5.16e-10!9;UBERON:0001917!5.16e-10!9;UBERON:0000483!7.86e-10!309;UBERON:0000119!1.84e-09!312;UBERON:0000923!8.82e-07!604;UBERON:0005291!8.82e-07!604;UBERON:0006598!8.82e-07!604;UBERON:0002532!8.82e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.75e-24;42!UBERON:0003509;7.75e-24;42!UBERON:0004572;7.75e-24;42!UBERON:0004573;2.23e-22;33!UBERON:0004571;2.23e-22;33!UBERON:0004638;4.02e-21;18!UBERON:0001986;4.02e-21;18!UBERON:0004852;4.02e-21;18!UBERON:0000487;1.87e-18;22!UBERON:0007500;1.17e-17;56!UBERON:0001981;1.17e-17;56!UBERON:0004537;1.17e-17;56!UBERON:0000490;1.70e-17;33!UBERON:0000055;7.54e-17;65!UBERON:0000947;4.94e-16;21!UBERON:0010191;4.94e-16;21!UBERON:0006914;1.24e-15;25!UBERON:0003915;3.77e-15;9!UBERON:0004700;3.77e-15;9!UBERON:0001917;3.77e-15;9!UBERON:0002049;9.12e-12;75!UBERON:0007798;9.12e-12;75!UBERON:0003914;4.49e-10;74!UBERON:0000025;5.08e-09;93!UBERON:0003834;8.67e-09;5!UBERON:0001533;8.67e-09;5!UBERON:0004111;7.69e-07;130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,2.88e-30,59;UBERON:0001981,2.88e-30,59;UBERON:0004537,2.88e-30,59;UBERON:0006965,2.88e-30,59;UBERON:0001637,7.66e-30,42;UBERON:0003509,7.66e-30,42;UBERON:0004572,7.66e-30,42;UBERON:0000055,3.86e-29,68;UBERON:0002049,3.42e-25,78;UBERON:0007798,3.42e-25,78;UBERON:0004573,1.53e-24,33;UBERON:0004571,1.53e-24,33;UBERON:0004638,2.61e-21,18;UBERON:0001986,2.61e-21,18;UBERON:0004852,2.61e-21,18;UBERON:0004872,2.77e-19,83;UBERON:0000487,1.20e-18,22;UBERON:0000490,1.44e-16,148;UBERON:0000947,7.51e-16,21;UBERON:0010191,7.51e-16,21;UBERON:0003914,7.72e-16,117;UBERON:0006914,8.47e-16,25;UBERON:0003915,3.62e-15,9;UBERON:0004700,3.62e-15,9;UBERON:0001917,3.62e-15,9;UBERON:0004535,1.56e-14,109;UBERON:0001009,7.85e-14,112;UBERON:0004111,1.13e-11,240;UBERON:0000025,8.68e-11,192;UBERON:0003834,8.22e-09,5;UBERON:0001533,8.22e-09,5;UBERON:0000483,2.83e-08,306;UBERON:0000119,4.89e-08,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,1.34465029290355,1.80808358407193,0,0.975865597581014,0,0,0,4.00730381983479,7.8018422291544,4.77062030460251,0,0,0,0,0,0,1.83884244895785,1.204823675113,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89069634328136,0.886917589850256,0.351339142772504,0,0.728590576585084,0,0,0,0,0,0,0,2.78267370313387,5.16140757063675,4.85996702250632,4.52246353539208,10.9069853414576,9.07889538402223,6.89683389571475,1.03366703667732,0.35576626268671,1.33888245105868,0.402829317109147,3.80136052859256,0,4.04429388380456,3.24056779152704,13.1270600577597,6.96041055141126,4.39184773884957,1.53316637465883,1.89853131913626,1.46561395144326,0,0,0.872188104285069,0,2.65924074495618,3.70745706277013,2.29469296599051,1.06400514659507,0,0,0.49333509683432,0,0.808264032418128,0.490385709340376,0,0,0,0,1.1409436430889,0,0.352303495931295,0,0.140450806702248,1.42907919878425,0.982674538494144,0.103325781175765,0,0,0,0,0.168336113954066,0,1.10825646193673,0,0.30648779579902,0,0.453728732640084,0,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0.773043412653187,1.09098448236334,6.59650569394709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,1.20364978706088,0,0,2.88662684050547,0,0,0.144366447761074,0,1.71228737011138,0,0,0,0,0,0,1.84780341018745,1.27597587518148,0.268675568108545,0.871901815541886,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,3.01439377059586,1.74306691720059,0.899756920638513,0,0,0,0.718874566474748,0,0,0.868687840005475,0,0.179060963239896,0,0,0,0,3.04913549066956,1.30139853857622,2.31986643833309,0.335032530668698,1.91381625495949,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6065841139427,1.47329582297434,0,0,0,0,0,0,0,0,0,1.36074964221213,0,0,0,0,0,0.831076008928724,0,0.219259876645935,0.261435451024901,0,0,0.325378394664303,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0,4.79326254546837,5.18913181885787,96.347597933411,0.809262246844399,0.929691098594572,2.51849877464512,0.6970372701606,4.00443654228915,1.06461206063404,6.08953094452551,5.5597265731176,8.30124343103549,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,1.81964233415984,1.58510321173008,0.421258456238981,0,5.36169677188826,2.11300293513511,0,0,0,1.65409603063837,8.62470667813585,8.76901770507525,0,0,3.65238678532867,1.8589409885985,0.563391205064483,0,0,3.21003946333125,0,0,0,0,0.699869440489966,2.98288549449087,2.01090682660736,4.3556393944529,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,11.5761053223822,0,0,0,0,0,15.9539144703361,0,0,6.11104787801823,0.537063524026827,0,0,0,5.55684950723184,0,0,0,0,0,0,1.0241410345695,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,1.48124672601102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0.586993856796269,0,0,0,0.30607276163049,0,0,0,1.32930774541437,5.95785520575898,0.313932918407225,4.77889719091835,0.284609546029793,0.138674673013139,0,0.293977192243133,6.35532208036939,0,0,0,0,0,0,0,0,4.52238351334278,13.3138789841003,0,0,10.3404878124478,0.213452994739353,0.39961921916426,0,0,0,9.36356186922973,31.4358914980544,1.88555227693436,2.17446729717782,1.35983700206033,0,0,0,0,0,5.15718529703949,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0.492137407573744,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,23.5488750438276,35.857467866569,0.191915197319445,0,0,0,0.542999601753713,5.18532894720761,0,3.59190574687462,0,4.94125263177723,0.113312091520126,0,0,0,0.39669780522807,0.342173675768659,2.81926008926669,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,7.4988244777264,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.295710299979268,1.59296767163702,0,1.08684069813382,0,0.265841714557995,1.5652351854352,0,0.761610424337591,0.813741466409323,0.181848659202559,3.65195893944461,0.928067519756987,1.59238355479446,2.80019435264208,0,0,2.52369796457302,0,0,0.782982875895635,0.906823702049089,4.86197196080051,7.58683783970049,10.0289751005633,0,0,2.29695889729645,3.47245268887647,2.02730928783687,0,0,7.90035886061194,0,0,0,0,0,10.8140079851637,14.5805365117453,0,0,0,0.567515953566836,0,1.258915569475,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0.733714394086716,7.39364263362165,0.762764190934334,0.690359926060101,0,0,0,0,0,21.7816650288429,3.40068998299204,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0.606965604236632,0.91064876540519,0,0,2.91529616043611,0,0,0.472775363535873,6.67388411352415,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.170426809518315,0,3.2074961596167,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.535661815816973,1.76447435857846,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1488789154827,0,0,0,0,0,0.215166616178029,0,0.89543595472072,2.02781957167659,0,0.898252021065869,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000513853 | |||
}} |
Revision as of 07:02, 11 January 2014
Short description: | p1@ENST00000513853 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000513853_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000513853_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.68e-24 | 250 |
blood vessel endothelial cell | 2.61e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.61e-21 | 18 |
endothelial cell of vascular tree | 1.30e-20 | 24 |
mesodermal cell | 5.24e-20 | 121 |
lining cell | 1.80e-17 | 58 |
barrier cell | 1.80e-17 | 58 |
squamous epithelial cell | 4.77e-17 | 63 |
epithelial cell | 3.33e-16 | 253 |
endothelial cell of artery | 3.62e-15 | 9 |
endothelial cell | 3.22e-13 | 36 |
vascular associated smooth muscle cell | 5.54e-12 | 32 |
meso-epithelial cell | 9.92e-11 | 45 |
aortic endothelial cell | 3.58e-10 | 6 |
vein endothelial cell | 1.13e-09 | 6 |
respiratory epithelial cell | 6.16e-09 | 13 |
smooth muscle cell of the subclavian artery | 8.22e-09 | 5 |
smooth muscle cell | 1.02e-07 | 43 |
smooth muscle myoblast | 1.02e-07 | 43 |
mesothelial cell | 5.60e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 2.88e-30 | 59 |
blood vessel | 2.88e-30 | 59 |
blood vasculature | 2.88e-30 | 59 |
vascular cord | 2.88e-30 | 59 |
artery | 7.66e-30 | 42 |
arterial blood vessel | 7.66e-30 | 42 |
arterial system | 7.66e-30 | 42 |
vessel | 3.86e-29 | 68 |
vasculature | 3.42e-25 | 78 |
vascular system | 3.42e-25 | 78 |
systemic artery | 1.53e-24 | 33 |
systemic arterial system | 1.53e-24 | 33 |
blood vessel endothelium | 2.61e-21 | 18 |
endothelium | 2.61e-21 | 18 |
cardiovascular system endothelium | 2.61e-21 | 18 |
splanchnic layer of lateral plate mesoderm | 2.77e-19 | 83 |
simple squamous epithelium | 1.20e-18 | 22 |
unilaminar epithelium | 1.44e-16 | 148 |
aorta | 7.51e-16 | 21 |
aortic system | 7.51e-16 | 21 |
epithelial tube | 7.72e-16 | 117 |
squamous epithelium | 8.47e-16 | 25 |
endothelial tube | 3.62e-15 | 9 |
arterial system endothelium | 3.62e-15 | 9 |
endothelium of artery | 3.62e-15 | 9 |
cardiovascular system | 1.56e-14 | 109 |
circulatory system | 7.85e-14 | 112 |
anatomical conduit | 1.13e-11 | 240 |
tube | 8.68e-11 | 192 |
thoracic segment blood vessel | 8.22e-09 | 5 |
subclavian artery | 8.22e-09 | 5 |
epithelium | 2.83e-08 | 306 |
cell layer | 4.89e-08 | 309 |