FFCP PHASE1:Hg19::chr11:2753854..2753856,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr11:2753854..2753856,- | |||
|id=chr11:2753854..2753856,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.85e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.99e-30,12;CL:0000223,6.40e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.62e-41;1!UBERON:0005425;1.81e-40;1!UBERON:0004161;6.30e-33;11!UBERON:0009497;5.04e-28;13!UBERON:0003056;1.71e-14;3!UBERON:0001041;1.14e-12;30!UBERON:0003104;4.96e-12;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;2.29e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,6.27e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.12e-46!57;UBERON:0005068!2.12e-46!57;UBERON:0006241!2.12e-46!57;UBERON:0007135!2.12e-46!57;UBERON:0001017!1.89e-37!82;UBERON:0002616!4.41e-36!59;UBERON:0005743!1.49e-35!86;UBERON:0000073!4.61e-35!94;UBERON:0001016!4.61e-35!94;UBERON:0000955!1.90e-33!69;UBERON:0006238!1.90e-33!69;UBERON:0003075!1.20e-32!86;UBERON:0007284!1.20e-32!86;UBERON:0002346!4.97e-31!90;UBERON:0002298!1.34e-29!8;UBERON:0007023!7.03e-29!115;UBERON:0003076!1.49e-27!15;UBERON:0003057!1.49e-27!15;UBERON:0004732!1.32e-24!13;UBERON:0002780!4.34e-24!41;UBERON:0001890!4.34e-24!41;UBERON:0006240!4.34e-24!41;UBERON:0003080!1.80e-23!42;UBERON:0006331!1.50e-20!3;UBERON:0000988!2.24e-20!3;UBERON:0004733!1.32e-19!12;UBERON:0002028!1.32e-19!12;UBERON:0007277!1.32e-19!12;UBERON:0002308!3.90e-18!9;UBERON:0000125!3.90e-18!9;UBERON:0000200!6.46e-18!6;UBERON:0004121!8.13e-18!169;UBERON:0000924!2.62e-17!173;UBERON:0006601!2.62e-17!173;UBERON:0000033!2.63e-17!123;UBERON:0001893!4.22e-17!34;UBERON:0002020!4.70e-17!34;UBERON:0003528!4.70e-17!34;UBERON:0000153!2.47e-16!129;UBERON:0007811!2.47e-16!129;UBERON:0003056!1.59e-15!61;UBERON:0000025!2.76e-15!194;UBERON:0005162!4.56e-15!2;UBERON:0000122!4.56e-15!2;UBERON:0001897!1.28e-14!2;UBERON:0002791!2.55e-14!33;UBERON:0002148!3.31e-14!2;UBERON:0009662!3.31e-14!2;UBERON:0002680!5.21e-12!9;UBERON:0001895!5.21e-12!9;UBERON:0010092!5.21e-12!9;UBERON:0001869!1.50e-11!32;UBERON:0004111!2.01e-11!241;UBERON:0002240!4.18e-10!3;UBERON:0001896!4.38e-10!3;UBERON:0005290!4.38e-10!3;UBERON:0010096!4.38e-10!3;UBERON:0002771!9.38e-10!3;UBERON:0001894!2.98e-09!7;UBERON:0006222!2.98e-09!7;UBERON:0009663!5.23e-09!7;UBERON:0000477!6.60e-09!286;UBERON:0000483!7.95e-09!309;UBERON:0000119!1.07e-08!312;UBERON:0000941!1.91e-08!1;UBERON:0004904!1.91e-08!1;UBERON:0002464!1.91e-08!1;UBERON:0001021!1.91e-08!1;UBERON:0001785!1.91e-08!1;UBERON:0002336!2.52e-08!1;UBERON:0001018!2.52e-08!1;UBERON:0002473!2.52e-08!1;UBERON:0005340!2.52e-08!1;UBERON:0002316!2.52e-08!1;UBERON:0003544!2.52e-08!1;UBERON:0001020!2.52e-08!1;UBERON:0005970!2.52e-08!1;UBERON:0002437!2.52e-08!1;UBERON:0002581!2.71e-08!1;UBERON:0002038!4.40e-08!1;UBERON:0009661!4.40e-08!1;UBERON:0007190!9.29e-08!1;UBERON:0001882!1.06e-07!1;UBERON:0005403!1.06e-07!1;UBERON:0001950!1.12e-07!20;UBERON:0002363!1.14e-07!1;UBERON:0007647!1.14e-07!1;UBERON:0010115!1.14e-07!1;UBERON:0002022!1.21e-07!1;UBERON:0002420!4.16e-07!9;UBERON:0007245!4.16e-07!9;UBERON:0010009!4.16e-07!9;UBERON:0010011!4.16e-07!9;UBERON:0000454!4.16e-07!9;UBERON:0002619!5.44e-07!22;UBERON:0000475!9.61e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.81e-40;1!UBERON:0001785;1.81e-40;1!UBERON:0002464;1.81e-40;1!UBERON:0004904;1.81e-40;1!UBERON:0001021;1.81e-40;1!UBERON:0003714;5.15e-21;2!UBERON:0005162;5.15e-21;2!UBERON:0000122;5.15e-21;2!UBERON:0002107;1.73e-19;19!UBERON:0006925;1.73e-19;19!UBERON:0002423;4.96e-15;25!UBERON:0002365;2.16e-11;31!UBERON:0002330;2.16e-11;31!UBERON:0002368;9.45e-11;33!UBERON:0000949;1.90e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.48e-40,1;UBERON:0001785,1.48e-40,1;UBERON:0002464,1.48e-40,1;UBERON:0004904,1.48e-40,1;UBERON:0001021,1.48e-40,1;UBERON:0003902,1.48e-40,1;UBERON:0005425,1.48e-40,1;UBERON:0003714,4.66e-21,2;UBERON:0005162,4.66e-21,2;UBERON:0000122,4.66e-21,2;UBERON:0002107,1.79e-19,19;UBERON:0006925,1.79e-19,19;UBERON:0008836,1.79e-19,19;UBERON:0008835,6.04e-17,22;UBERON:0003894,6.04e-17,22;UBERON:0009854,3.01e-16,23;UBERON:0007499,5.08e-15,25;UBERON:0009497,5.08e-15,25;UBERON:0000015,5.08e-15,25;UBERON:0002423,5.08e-15,25;UBERON:0006235,5.08e-15,25;UBERON:0004161,5.08e-15,25;UBERON:0009856,1.78e-14,26;UBERON:0002365,2.79e-12,31;UBERON:0002330,2.79e-12,31;UBERON:0001781,3.10e-11,4;UBERON:0002368,5.68e-11,35;UBERON:0000949,1.04e-08,45;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0003929,2.22e-07,54;UBERON:0005172,2.22e-07,54;UBERON:0005173,2.22e-07,54;UBERON:0002530,8.16e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,1.2362378757175,1.75249214020881,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.394636641377094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr11:2753854..2753856,- | |||
}} |
Revision as of 06:13, 11 January 2014
Short description: | p@chr11:2753854..2753856, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:2753854..2753856, - |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.99e-30 | 12 |
endodermal cell | 6.40e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.48e-40 | 1 |
cranial nerve | 1.48e-40 | 1 |
nerve trunk | 1.48e-40 | 1 |
nerve connecting eye with brain | 1.48e-40 | 1 |
nerve | 1.48e-40 | 1 |
retinal neural layer | 1.48e-40 | 1 |
presumptive neural retina | 1.48e-40 | 1 |
neural tissue | 4.66e-21 | 2 |
multi cell component structure | 4.66e-21 | 2 |
neuron projection bundle | 4.66e-21 | 2 |
liver | 1.79e-19 | 19 |
digestive gland | 1.79e-19 | 19 |
liver bud | 1.79e-19 | 19 |
hepatic diverticulum | 6.04e-17 | 22 |
liver primordium | 6.04e-17 | 22 |
digestive tract diverticulum | 3.01e-16 | 23 |
epithelial sac | 5.08e-15 | 25 |
epithelium of foregut-midgut junction | 5.08e-15 | 25 |
anatomical boundary | 5.08e-15 | 25 |
hepatobiliary system | 5.08e-15 | 25 |
foregut-midgut junction | 5.08e-15 | 25 |
septum transversum | 5.08e-15 | 25 |
sac | 1.78e-14 | 26 |
exocrine gland | 2.79e-12 | 31 |
exocrine system | 2.79e-12 | 31 |
layer of retina | 3.10e-11 | 4 |
endocrine gland | 5.68e-11 | 35 |
endocrine system | 1.04e-08 | 45 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
gut epithelium | 2.22e-07 | 54 |
abdomen element | 2.22e-07 | 54 |
abdominal segment element | 2.22e-07 | 54 |
gland | 8.16e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 6.27e-10 | 39 |