FFCP PHASE1:Hg19::chr11:2018007..2018012,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100033819 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33351 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=48bp_to_ENST00000390168,NR_030533_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_1_at_MIR675_5end | |||
|id=chr11:2018007..2018012,- | |||
|ontology_enrichment_celltype=CL:0002541!3.17e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.77e-22;19!CL:0002537;1.70e-16;5!CL:0002541;4.34e-13;3!CL:0002616;8.24e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.34e-22,19;CL:0002537,1.70e-16,5;CL:0002541,4.34e-13,3;CL:0002616,5.79e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.64e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;8.24e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.17e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.99e-20!14;UBERON:0000158!4.99e-20!14;UBERON:0000478!9.24e-18!24;UBERON:0003124!2.40e-12!7;UBERON:0001737!1.46e-11!9;UBERON:0001557!4.68e-10!19;UBERON:0000305!1.93e-09!7;UBERON:0004923!2.78e-09!57;UBERON:0003104!1.20e-08!238;UBERON:0009142!1.20e-08!238;UBERON:0000476!3.17e-08!3;UBERON:0000920!3.17e-08!3;UBERON:0004871!3.42e-08!8;UBERON:0002300!5.65e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.43e-31;10!UBERON:0000158;2.43e-31;10!UBERON:0000478;1.79e-22;24!UBERON:0000305;3.42e-20;7!UBERON:0003124;4.34e-13;3!UBERON:0000920;4.34e-13;3!UBERON:0002426;4.64e-10;1!UBERON:0003831;4.64e-10;1!UBERON:0003898;4.64e-10;1!UBERON:0004830;4.64e-10;1!UBERON:0003830;4.64e-10;1!UBERON:0005175;4.64e-10;1!UBERON:0001774;4.64e-10;1!UBERON:0001103;4.64e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,1.66e-22,24;UBERON:0005631,2.55e-22,14;UBERON:0000158,2.55e-22,14;UBERON:0000305,3.10e-20,7;UBERON:0004871,9.69e-18,8;UBERON:0000920,4.34e-13,3;UBERON:0002426,4.44e-10,1;UBERON:0003831,4.44e-10,1;UBERON:0003898,4.44e-10,1;UBERON:0004830,4.44e-10,1;UBERON:0003830,4.44e-10,1;UBERON:0005175,4.44e-10,1;UBERON:0001774,4.44e-10,1;UBERON:0001103,4.44e-10,1;UBERON:0010084,4.44e-10,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,1.74467704820074,0,0,0,0,0.697801167972428,0.873765488520689,1.58260186937072,0.123766352960047,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,5.18558332031999,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.482022059766964,0.110293972732394,0.435758888184812,0,0.674156540800822,0.196221465125346,0.38474715694639,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.88359444852299,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0.587403472388222,1.71571711905428,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0,0,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.6851934495603,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4597352674091,1.18785872333055,16.5866779133585,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07709173291727,2.17294743844016,12.4410452295449,0.0915975934018623,21.854425816764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39581141080687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,3.97520666736664,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03973099535304,0,0,0,0,0,0,0.523813388962845,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79832133146375,0,1.02892805662451,0,0,0,0,0.078493092850514,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257831551894309,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0.202117188958219,0.435433495793923,0,0,0,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0,0 | |||
|short_description=p1@MIR675 | |||
}} |
Revision as of 06:07, 11 January 2014
Short description: | p1@MIR675 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR675_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 48bp_to_ENST00000390168, NR_030533_5end |
EntrezGene: | MIR675 |
HGNC: | 33351 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.34e-22 | 19 |
amnion mesenchymal stem cell | 1.70e-16 | 5 |
chorionic membrane mesenchymal stem cell | 4.34e-13 | 3 |
perirenal adipocyte cell | 5.79e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 1.66e-22 | 24 |
extraembryonic membrane | 2.55e-22 | 14 |
membranous layer | 2.55e-22 | 14 |
amnion | 3.10e-20 | 7 |
somatic layer of lateral plate mesoderm | 9.69e-18 | 8 |
egg chorion | 4.34e-13 | 3 |
chest muscle | 4.44e-10 | 1 |
respiratory system muscle | 4.44e-10 | 1 |
skeletal muscle of trunk | 4.44e-10 | 1 |
respiratory system skeletal muscle | 4.44e-10 | 1 |
thoracic segment muscle | 4.44e-10 | 1 |
chest organ | 4.44e-10 | 1 |
muscle of trunk | 4.44e-10 | 1 |
diaphragm | 4.44e-10 | 1 |
future diaphragm | 4.44e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.17e-09 | 1 |