FFCP PHASE1:Hg19::chr11:123066004..123066026,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79827 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24039 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H6B4 | |||
|association_with_transcript=0bp_to_NM_024769,uc001pyt.2_5end | |||
|description=CAGE_peak_2_at_CLMP_5end | |||
|id=chr11:123066004..123066026,- | |||
|ontology_enrichment_celltype=CL:0000055!5.72e-43!180;CL:0000057!8.48e-23!75;CL:0000680!6.50e-19!57;CL:0000056!6.50e-19!57;CL:0000355!6.50e-19!57;CL:0000187!6.37e-18!54;CL:0000393!6.59e-18!60;CL:0000211!6.59e-18!60;CL:0000183!3.16e-16!59;CL:0000192!4.29e-13!42;CL:0000514!4.29e-13!42;CL:0000359!6.19e-11!32;CL:0002620!1.67e-10!23;CL:0002321!4.10e-09!248;CL:0000220!7.06e-09!246;CL:0000548!3.56e-07!679;CL:0000004!3.56e-07!679;CL:0000255!3.56e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.40e-11;23!CL:0000187;2.51e-11;55!CL:0000359;2.73e-11;32!CL:0000192;8.64e-11;43!CL:0000057;1.53e-10;73!CL:0000393;2.96e-10;61!CL:0000211;2.96e-10;61!CL:0002320;1.71e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.83e-25,76;CL:0000680,7.40e-21,58;CL:0000056,7.40e-21,58;CL:0000355,7.40e-21,58;CL:0000187,9.31e-20,55;CL:0000393,8.22e-19,61;CL:0000211,8.22e-19,61;CL:0000192,2.06e-14,43;CL:0000514,2.06e-14,43;CL:0000359,6.10e-12,32;CL:0002620,1.23e-11,23;CL:0002321,1.55e-08,250;CL:0000034,4.41e-08,441;CL:0000048,6.90e-08,427;CL:0000723,6.91e-08,433 | |||
|ontology_enrichment_development_v019=CL:0000355;1.85e-11;58!CL:0000514;8.64e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.24e-24!83;UBERON:0002329!1.24e-24!83;UBERON:0003077!1.24e-24!83;UBERON:0003059!1.24e-24!83;UBERON:0007282!1.24e-24!83;UBERON:0009618!1.24e-24!83;UBERON:0007285!1.24e-24!83;UBERON:0004290!4.47e-21!70;UBERON:0000486!8.74e-19!82;UBERON:0001134!9.09e-17!61;UBERON:0002036!9.09e-17!61;UBERON:0003082!9.09e-17!61;UBERON:0002385!1.55e-16!63;UBERON:0001015!1.55e-16!63;UBERON:0000383!1.55e-16!63;UBERON:0003102!2.05e-15!95;UBERON:0005256!1.29e-14!143;UBERON:0003104!4.92e-11!238;UBERON:0009142!4.92e-11!238;UBERON:0000481!2.63e-10!347;UBERON:0002199!1.49e-09!45;UBERON:0002416!1.49e-09!45;UBERON:0001637!5.76e-09!42;UBERON:0003509!5.76e-09!42;UBERON:0004572!5.76e-09!42;UBERON:0002100!8.88e-09!216;UBERON:0000468!1.91e-08!659;UBERON:0002097!1.91e-08!40;UBERON:0000475!2.06e-08!365;UBERON:0004573!4.65e-08!33;UBERON:0004571!4.65e-08!33;UBERON:0004872!8.19e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;9.04e-09;198!UBERON:0002204;1.12e-07;70!UBERON:0002385;2.85e-07;31!UBERON:0001015;2.85e-07;31!UBERON:0000383;2.85e-07;31!UBERON:0004573;4.91e-07;33!UBERON:0004571;4.91e-07;33!UBERON:0002097;6.76e-07;41!UBERON:0002199;8.64e-07;46!UBERON:0002416;8.64e-07;46!UBERON:0001434;9.21e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.18e-22,71;UBERON:0003059,1.18e-22,71;UBERON:0007282,1.18e-22,71;UBERON:0004290,1.18e-22,71;UBERON:0009618,1.18e-22,71;UBERON:0007524,2.38e-22,73;UBERON:0003077,6.22e-22,72;UBERON:0007285,6.22e-22,72;UBERON:0000486,1.02e-19,83;UBERON:0007503,1.43e-18,78;UBERON:0001134,6.38e-18,62;UBERON:0002036,6.38e-18,62;UBERON:0003082,6.38e-18,62;UBERON:0002385,2.89e-17,64;UBERON:0001015,2.89e-17,64;UBERON:0000383,2.89e-17,64;UBERON:0003102,2.46e-14,99;UBERON:0003104,1.47e-12,160;UBERON:0009142,1.47e-12,160;UBERON:0005256,2.42e-12,122;UBERON:0002199,1.71e-10,46;UBERON:0002416,1.71e-10,46;UBERON:0002097,3.77e-09,41;UBERON:0001637,9.28e-09,42;UBERON:0003509,9.28e-09,42;UBERON:0004572,9.28e-09,42;UBERON:0000490,1.60e-08,148;UBERON:0004573,5.93e-08,33;UBERON:0004571,5.93e-08,33 | |||
|phase1_expression=1.81678379270557,3.63970890614671,2.25527046553554,1.0007329835313,1.78784437770915,2.61701557230111,0,10.7392378482561,3.3954131665979,1.72013755551056,0,0.218441372130172,0.263766978228454,6.31208400096238,6.95934489028623,5.3786011716142,4.82155622419182,2.92124036154949,2.92759679274304,1.84681587115182,2.65200898617529,1.56727360739044,1.71741592278634,1.36874425072884,0.251085279189606,0,0,0,0,0,0.154816123316076,0.919421224478927,0.90361775633475,3.32778609150109,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,3.35350429851818,1.53435074212236,7.59022220007589,4.01070328508712,4.49024208778554,0.795285947051099,1.45990461090791,1.51255707462509,2.4390233720882,1.31752178539689,0.392937226493138,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,2.09749718104953,0.275118041940067,1.04497483268405,0,0.35576626268671,0,0,0,0,0,1.62028389576352,0,0,0.563057402416611,1.53316637465883,0,0,0,0,1.74437620857014,5.4666914686485,4.93858995491861,4.8991396900891,4.87622255272983,7.80270440836386,2.24271040056923,7.47242970107935,1.48000529050296,2.8008993185979,2.42479209725439,7.19232373699218,2.8757911252537,1.72852777344,6.56100009134631,8.42832207441865,3.99330275081114,8.07022874979726,10.4516703792951,13.597327326923,9.97200727585964,7.34955016517616,11.7920944619297,10.4359038987523,13.0680314301026,9.1488763833066,0.910161361938026,3.59309070908119,7.40678901397891,10.635074189117,8.03485934904131,6.58466431321257,5.21029252858333,6.00952235626387,2.49550802952046,5.38168907066586,5.33893472046419,9.53693555218028,7.80236849819446,7.11062451745228,4.12224864073007,5.76962254627928,7.76371128309825,5.74878330451072,6.81571190459109,5.33889412125336,5.4959659318396,6.03516307278244,5.44061330429257,5.59549954624609,1.15956511897978,0.545492241181669,0.286804595389004,2.92736894711029,2.65059536642971,3.02104251460748,2.48786532036889,3.28017106138317,0.36497735907583,4.69348596989448,4.5026865673502,6.90674606762403,3.25057549622385,1.44375896333917,4.37735160147422,5.56329477257736,6.50729780685401,5.95587452754927,6.10062443458737,7.1181185733329,4.85392709376592,5.101758093259,6.92544882503503,0.738155454624648,0,1.2347220339942,2.94017422771084,0,0,0,0,0.737930631258681,3.60292401626904,1.97550513735526,2.24803506515239,1.91005047582099,1.38882667737794,4.88712457965487,3.11980435583874,1.44331342025273,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,2.01578553838631,2.97727704209012,5.82130397568514,4.35950907770943,3.83382679165211,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,4.59737445815979,1.30788020649984,6.52710743806455,4.00742318849111,10.7296933755565,2.535908257668,2.12750493267896,5.2003718455683,2.82928111688356,5.67396528093113,5.32844358032199,2.7165818795048,1.08524321078289,3.29296134712308,8.14340460734338,1.77695974371273,5.543663110534,3.31583314765545,0,3.19913571782583,0,0,0,2.39624855491583,3.44585807502342,2.85273810081437,3.32997005335432,6.36976599906189,5.01370697071708,0,0,0,0,0.508189248444927,0,0.773288812777695,0.837581326671744,1.91381625495949,0,0,0,8.71109591205893,3.50119364741774,6.78162559249339,4.15941723061614,5.17444067511769,5.36188211115378,4.91993942969395,2.70851489754947,2.27407504055985,5.17365356462525,6.64225598535437,4.97796755062599,10.512917350638,1.17480694477644,0.686286847621712,0,0,0,0.303127571446259,0,0.30239029332968,2.72918588600655,1.38115775959256,4.2099014164961,1.53766979106841,1.53512174720011,2.41280881715411,2.96836132889982,10.6404688723832,7.81271591377759,11.6620561539609,11.4235974420397,9.4130406552567,2.05461064305758,0.802025881213139,2.3941057123333,7.11849578620562,8.92246723232913,4.98272776845812,1.80479845162965,1.07821471946181,1.56869953835371,1.46139224653261,1.89992932007176,0,0,0.431831832204279,0,1.35473218771926,0.501689773854853,2.29388645740534,0,2.23874754722178,0,0,1.79515087581472,0,1.95227036798582,0.309123034943167,2.56394501491362,1.81520899825294,1.14853107599234,3.25030123018261,3.21367859688319,7.926998899954,11.0915004322544,11.3592719297336,9.78639664640167,8.37877909972534,6.96080130788297,8.94879587869059,2.67096106940212,1.65284915360978,2.11409074101617,2.80747967488085,1.8208400553999,7.43752878875657,4.7221852024596,9.0614845120878,5.5446044431696,1.06461206063404,6.95946393660058,4.81842969670192,6.15437012990562,2.232950216158,3.16379424718726,2.66882271493355,1.535386747868,2.56763392820352,7.63687795022248,8.63443504219153,4.49681143958287,4.39259247577688,5.53718291024726,5.45892700247953,3.17020642346017,5.47635993110675,2.43816869544795,6.82397770967596,3.16950440270266,5.18699663350346,6.36324443791707,6.78048699721457,7.16774946609961,6.6343897524122,5.26141062304515,1.15755106853338,2.62357900818653,3.04365565444056,7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806,7.7228912914776,11.3179754654299,2.34640942403454,3.54500188130313,2.84827324821017,1.99727032255654,1.00636896795513,0 | |||
|short_description=p2@CLMP | |||
}} |
Revision as of 10:57, 11 January 2014
Short description: | p2@CLMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLMP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_024769, uc001pyt.2_5end |
EntrezGene: | CLMP |
HGNC: | 24039 |
UniProt: | Q9H6B4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.83e-25 | 76 |
muscle precursor cell | 7.40e-21 | 58 |
myoblast | 7.40e-21 | 58 |
multi-potent skeletal muscle stem cell | 7.40e-21 | 58 |
muscle cell | 9.31e-20 | 55 |
electrically responsive cell | 8.22e-19 | 61 |
electrically active cell | 8.22e-19 | 61 |
smooth muscle cell | 2.06e-14 | 43 |
smooth muscle myoblast | 2.06e-14 | 43 |
vascular associated smooth muscle cell | 6.10e-12 | 32 |
skin fibroblast | 1.23e-11 | 23 |
embryonic cell | 1.55e-08 | 250 |
stem cell | 4.41e-08 | 441 |
multi fate stem cell | 6.90e-08 | 427 |
somatic stem cell | 6.91e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
somite | 1.18e-22 | 71 |
presomitic mesoderm | 1.18e-22 | 71 |
presumptive segmental plate | 1.18e-22 | 71 |
dermomyotome | 1.18e-22 | 71 |
trunk paraxial mesoderm | 1.18e-22 | 71 |
dense mesenchyme tissue | 2.38e-22 | 73 |
paraxial mesoderm | 6.22e-22 | 72 |
presumptive paraxial mesoderm | 6.22e-22 | 72 |
multilaminar epithelium | 1.02e-19 | 83 |
epithelial vesicle | 1.43e-18 | 78 |
skeletal muscle tissue | 6.38e-18 | 62 |
striated muscle tissue | 6.38e-18 | 62 |
myotome | 6.38e-18 | 62 |
muscle tissue | 2.89e-17 | 64 |
musculature | 2.89e-17 | 64 |
musculature of body | 2.89e-17 | 64 |
surface structure | 2.46e-14 | 99 |
mesenchyme | 1.47e-12 | 160 |
entire embryonic mesenchyme | 1.47e-12 | 160 |
trunk mesenchyme | 2.42e-12 | 122 |
integument | 1.71e-10 | 46 |
integumental system | 1.71e-10 | 46 |
skin of body | 3.77e-09 | 41 |
artery | 9.28e-09 | 42 |
arterial blood vessel | 9.28e-09 | 42 |
arterial system | 9.28e-09 | 42 |
unilaminar epithelium | 1.60e-08 | 148 |
systemic artery | 5.93e-08 | 33 |
systemic arterial system | 5.93e-08 | 33 |