FFCP PHASE1:Hg19::chr11:101980791..101980865,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10413 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16262 | |||
|TSSclassifier=strong | |||
|UniProt=E9PRV2,E3WEB6,P46937,Q86T74 | |||
|association_with_transcript=-326bp_to_ENST00000282441,ENST00000526343,NM_001130145,NM_001195044,NM_006106_5end | |||
|coexpression_cluster_id=C3068 | |||
|description=CAGE_peak_4_at_YAP1_5end | |||
|id=chr11:101980791..101980865,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.01e-14!180;CL:0000057!4.41e-12!75;CL:0000066!1.70e-08!254;CL:0000223!2.20e-08!59;CL:0000220!7.24e-08!246;CL:0002321!9.85e-08!248;CL:0002620!2.94e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.81e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.34e-12,76;CL:0000223,6.76e-09,58;CL:0000066,9.19e-08,253;CL:0002620,2.49e-07,23;CL:0002321,7.83e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.81e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.24e-08;9!UBERON:0001557;9.24e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.69e-20,160;UBERON:0000925,9.69e-20,160;UBERON:0006595,9.69e-20,160;UBERON:0001007,1.22e-17,145;UBERON:0001555,1.22e-17,145;UBERON:0007026,1.22e-17,145;UBERON:0002100,4.41e-16,199;UBERON:0004921,1.16e-13,118;UBERON:0005256,5.88e-12,122;UBERON:0003102,5.92e-12,99;UBERON:0003104,7.25e-12,160;UBERON:0009142,7.25e-12,160;UBERON:0001048,4.51e-10,160;UBERON:0005911,9.16e-09,82;UBERON:0001041,1.05e-08,87;UBERON:0001004,4.20e-08,74;UBERON:0005156,7.72e-08,59;UBERON:0000990,7.72e-08,59;UBERON:0005177,8.98e-08,101;UBERON:0000490,9.61e-08,148;UBERON:0001737,1.06e-07,9;UBERON:0009569,2.27e-07,112;UBERON:0008947,4.62e-07,38;UBERON:0003258,4.62e-07,38;UBERON:0000486,5.43e-07,83;UBERON:0002199,5.75e-07,46;UBERON:0002416,5.75e-07,46;UBERON:0003929,9.04e-07,54 | |||
|phase1_expression=5.26867299884614,4.49611100171065,5.3562673556469,3.00219895059391,4.46961094427288,4.36169262050184,2.53299878168311,5.05375898741465,2.87304191019822,3.68600904752263,5.58240934377942,11.5773927228991,6.59417445571134,2.10402800032079,2.31978163009541,7.39557661096953,6.02694528023977,5.11217063271161,5.36726078669558,2.46242116153576,3.26401105990805,0.940364164434263,1.14494394852423,2.05311637609326,2.51085279189606,0,0,0,0,0,0.154816123316076,6.43594857135249,5.72291245678675,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,3.83587685530591,1.44575660953827,3.50936537445123,4.49024208778554,1.5905718941022,1.45990461090791,2.45790524626576,1.77383517970051,2.81071314218003,3.07800827419625,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,2.26123176769604,0.419499436209906,1.10047216776027,0.417989933073621,0,1.42306505074684,1.00416183829401,0.402829317109147,3.80136052859256,0.24406205754817,1.83831540172934,0,1.69669483739752,2.46982309888787,2.25222960966644,1.53316637465883,3.79706263827252,2.01521918323448,0,0,6.10531672999548,5.96366342034382,3.92554586160197,2.51577443545116,4.87622255272983,6.73869926176878,2.24271040056923,1.06748995729705,3.45334567784024,5.91300967259556,3.09834545760283,4.41347138406339,4.08665054641315,2.88087962239999,1.64025002283658,4.37024107562449,2.85235910772225,3.73621701379503,4.11020745253177,8.41739310714284,5.33713065468544,4.69554593886255,7.86139630795315,5.26961483996404,9.50402285825643,6.18167323196392,3.64064544775211,7.18618141816238,5.55509176048418,4.75450375513464,6.64953877162039,2.63386572528503,2.14541457059314,4.35690370829131,2.94923676216055,6.27863724911017,3.41691822109708,4.4505699243508,5.10154863343484,5.04957393268351,4.89517026086695,5.21127197728451,5.06328996723799,4.77441325289873,5.04867548488229,5.52299391853796,6.14255015911485,4.26011511019937,3.72782763442269,6.95198428472999,3.47869535693934,2.45471508531751,5.44928731239107,1.09776335516636,2.65059536642971,2.32387885739037,2.17688215532278,2.77552935963191,4.01475094983413,3.12899064659632,3.85944562915731,2.76269842704961,2.3218396401599,0,17.7460200059766,13.6553598963262,19.0398713607951,15.5514501552675,23.0952210737951,14.2362371466658,12.5393116588953,18.0523747915318,13.8508976500701,3.69077727312324,5.60967095213783,1.6462960453256,2.94017422771084,5.07020139287323,7.86261773342101,4.72631925345123,0,3.93563003337963,2.74508496477641,5.48751427043128,6.74410519545717,3.9206299240536,3.24059558054854,2.93227474779292,1.03993478527958,1.44331342025273,2.43453850447661,3.28744343860301,0.866198686566443,0.462985512576611,2.09279567458058,1.58040879591855,0.858486162094873,0,0,0,1.87467667973554,4.36753533317035,3.96970272278682,3.22410681730254,5.81267877027924,5.75074018747817,0,0,0.207328115540772,0,0,2.41291998310242,3.05590740446622,1.17217447210047,1.71072446022705,3.90744472272629,6.60754727256618,4.28739648945867,6.72786506072164,3.05172048183296,4.62031200671985,4.91232519879556,7.15312891703765,0,4.78688609852767,4.16029747645464,1.80045161983499,2.83698264046557,2.39779961114489,3.28849385413739,3.25572963234866,1.64648067356154,3.58309802723109,2.13235169245527,3.16780749173372,5.42590878707255,3.48613383440118,6.69819040919782,0,0,0,4.0736225433569,3.44585807502342,14.2636905040718,2.46128221334885,3.49309748335652,3.04403637507822,0,0,0,0,2.28685161800217,3.90419561572865,0,0.335032530668698,0,0,0,0,1.47229790062968,2.50085260529839,2.98391526069709,4.99130067673937,2.67643483195743,5.51958452618771,7.1456263145555,3.91229929646035,4.5481500811197,2.0694614258501,2.65690239414175,3.87175253937577,5.12613325361689,1.95801157462741,2.05886054286514,0,0,0,3.33440328590885,1.66435439510497,4.5358543999452,5.70647957983187,4.14347327877769,3.92924132206303,6.91951405980785,3.58195074346692,3.86049410744658,5.93672265779964,4.93471020168498,5.14929003408069,6.57017248110473,7.78881643775432,5.81051892299796,6.04297247958111,6.01519410909855,5.15653538041019,1.95184561879831,4.91646153618136,3.01586154406675,4.06079651616671,4.62092022626489,5.49044838423799,0,2.95544560900052,0,0.680374821106063,4.53423423814493,0,3.52230368807009,1.50506932156456,5.09752546090077,1.66215201785745,3.58199607555485,0,0,1.79515087581472,1.64007322849853,2.92840555197873,2.67906630284078,2.38080608527693,1.23764249880882,4.01985876597321,2.60024098414608,0,5.31688950606671,3.23502095940753,3.53058451870098,3.44591431211326,3.54486808065303,3.19036726611303,2.98293195956353,2.22580089116843,3.8015530533025,5.18913181885787,9.44334072459923,4.8555734810664,6.04299214086472,3.77774816196768,4.1822236209636,2.15623506123262,1.06461206063404,0.869932992075073,2.40921484835096,2.00374841438788,2.60510858551767,3.48017367190598,5.71890581771475,2.81487570442467,3.85145089230528,3.5002357271853,1.56989728039846,3.77732160924961,4.66712950551293,4.24124648444471,3.03273722359974,1.58510321173008,6.7401352998237,2.43816869544795,3.65570234446927,5.28250733783777,5.7329962791354,3.81794666275024,3.39024349860728,7.16774946609961,2.65375590096488,2.19225442626881,4.05142873986681,7.21484227251296,3.44947640836597,2.478587984798,1.40847801266121,4.4457519183256,4.32295780457733,1.426684205925,2.12856638442359,2.32218398827431,3.62224382255892,3.79473173765715,3.14941248220485,4.13755084719702,1.34060455107157,3.26672954583968,3.10674542563371,1.72202149068492,5.05414427002877,2.66058092122005,4.59446800413919,0,0,0,0,0,0,0,0,2.99107399156925,7.69983884210687,1.47024129588619,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,2.8071081061233,3.51619630252546,3.88353669598443,0,4.2620422020962,8.59480145055684,5.04839957415486,8.90766036087773,0,2.53204949538923,4.89758302100786,0,2.11125408127993,6.97367958878744,3.03912307084262,0,4.60209071259697,0,2.17727711363265,6.82999468719684,1.61119057208048,0,4.93217028184668,0,4.44547960578548,3.87733098438087,0.556608588971108,0,4.42727193844896,2.0115799999125,2.17499872630438,4.32415103484899,4.06805840468426,1.65471377237555,0,0.291604613383254,0.694499979733169,3.54296554325536,2.65312164975897,0,0.884634079449797,0.886642856860642,2.4132393686937,1.63407695278485,5.15867853830832,7.54112533337211,3.41826167541004,7.14748103602986,4.12885164284952,4.99777910841237,7.01802551410223,4.03029410968194,3.73124343213044,0,0,0,0,0,0,0,0,4.64195741961659,1.63232808159148,4.80600442875399,1.08194319871046,8.95735737970654,3.80367527364358,4.27721101453538,0.296521128680622,1.11207545051853,0.626531697032732,2.29163852134302,4.81546588379273,2.10838001152805,0,2.93496928398135,1.94224303627274,6.31335044559025,3.62972148145992,0.91821828489147,1.89559738885464,2.70582154946087,2.79958116772567,10.634461963315,3.30991955875499,5.96472544973728,7.16834578637753,2.84609546029793,6.65638430463066,3.99187398170801,1.27390116638691,22.7224529174851,6.29016005671309,2.40780445460263,5.70862354605602,7.96673556239423,6.97981384952278,4.17052770900203,3.26547668758551,3.84167259326905,5.07055121192978,9.73701597344649,0.759729551470544,4.69323318563527,1.20238230377301,8.75157278431345,3.79638258206047,0,4.12331746197296,0,2.0167671718341,2.23654564017779,11.7847017308398,1.63085047288337,3.87030531355633,2.03996435272644,6.64586356773493,3.00210144354895,1.50595916781192,0,6.87624706271931,0,3.90995361781156,8.47893568843229,0.717873024576814,3.79390100948083,3.004582336956,2.90122894674434,4.36692571163721,5.40449825313605,23.2991899054908,7.95710141302959,7.99433826297315,9.3690925957317,3.05125192695721,0,3.97614844904652,2.45166131000836,3.05430982083536,2.47570985875021,2.07720169014593,0,0,1.27574068981852,5.36695500158826,3.38864541386552,3.98654869825986,7.28642321983905,2.15144807199414,5.56554072226391,2.85878130549347,1.32418394073086,0.76280561296425,1.62899880526114,1.72844298240254,2.61269888087527,2.39460383124975,0,5.45241669713349,5.66560457600628,3.51725360827398,2.65013777824443,3.10279095267721,2.11572162788304,3.59282359557092,9.16259529011673,4.48507132784318,7.70301094988363,4.55662960881915,3.96932817449561,0,1.70509637733254,1.27668251554036,11.424373870759,6.5179372445902,4.28883807468846,3.93447156851765,3.61224421375539,1.77213635993397,1.83039397352945,1.6274820991845,4.58727356552057,4.43716206147409,3.10482014706917,0.830091809617385,0.999843263696853,4.70112264379108,0.570930667089935,2.35265819698172,0,0,2.98509605773748,3.27198633786114,3.32883516901568,5.87149316352776,5.28292593680408,3.55924488638614,7.09404212030463,3.93200401784422,4.81855321806619,4.43565449968902,8.92061896116734,7.19684979461767,6.05525531817412,5.39118070193112,4.51930914748591,3.1304703708704,4.65798587891377,4.95046775819434,2.44122439922797,6.7284003904947,8.48543400635659,9.74470895744837,5.57334244178062,3.20022211730523,4.12074846219351,4.71449284272287,3.78554694685953,1.34833881285112,4.07439023612359,2.60994291965212,4.98753036126999,4.63044948647668,2.69210374957114,3.40268798054826,2.77921302444875,2.85069264452319,8.65776815134817,5.78742114812744,4.73038833828603,2.30617366729152,2.41801239211839,3.3424595179512,1.7973596699725,0,0,0.163565394255844,4.58653788384978,2.94927490504463,1.26787274015176,0,0.213383459388282,0,7.9452233499357,8.46887371158467,1.95831310807222,5.59869534029676,0,0.107824811396682,1.10086159299127,0,2.20652288940233,0.850299680406731,1.11542187833102,1.11728983594649,5.72407831176153,0,0,1.05802783107205,1.531227386766,1.54150140231503,0,1.59633859057151,0.615349092722265,0.252071696221718,0.899044282034833,1.45328081068666,1.42769420259154,5.00553364355231,0.707818340086442,2.01771458373847,2.88814165375846,9.53455238667918,19.3300779296828,2.3869946653953,7.67145349162424,7.46308754203024,0,6.54766736203556,13.2655253183178,7.68851648328635,1.35075169236789,1.56215619722769,2.06686796501184,2.28296916698065,1.09394961803644,2.19303106742873,3.96968942711435,0.527613733078862,37.3066288707618,1.07140367175657,1.00885116665647,0,1.13831095675649,4.16901139764402,0,3.94422421706063,1.01954599465248,1.31545547125698,5.08233515801063,8.67604934758139,6.59341979944318,0.942693539496011,7.28707624615851,3.65263488203798,2.15927591218621,0,8.21980258031548,0,2.20858708199438,2.08629926763095,5.61197955311177,3.31545862660859,2.56077715640925,5.53007729451273,4.30227358820278,6.86325604237279,6.6466455712143,9.31451510420044,4.35303050233695,4.6530957849648,8.5998504507969,1.11855431797792,4.31861027907069,2.07260472469858,2.58971534875158,2.05325613712494,9.27851545070559,5.34282092365053,0,0,2.61624199710651,2.03302947670128,0,0,2.00652811080656,3.27839340755936,0,5.14811475683202,0,2.74831853960923,1.78227840196252,5.0718687310008,7.30686593157613,3.47740496525458,2.90060495881097,0,1.42843150884526,0.352894871715692,2.00603416722921,1.46067277649303,3.66983426723633,1.57673541466596,3.47097436825006,1.35982980381829,1.30905207102113,3.1741610430924,2.60396512716726,2.77305377178851,4.32626562123789,2.90182777120682,0.655593431782173,1.26698501011437,3.67159787071134,2.13773924212448,2.6649520865105,2.005660314339,2.80381183407486,3.48353369203032,1.65833887891756,2.27552590896169,4.05144565611864,3.80903090341985,0.581300188524055,1.11734485732544,10.0918676322552,2.73682780596109,4.24446096812261,5.22520194952707,4.10679961302337,1.48174516632093,3.72955468041917,4.65724499164419,8.05892359248648,6.72382279029607,7.7228912914776,3.95230889268982,2.34640942403454,9.77931553462932,2.03448089157869,10.6521083869682,2.01273793591026,0 | |||
|short_description=p4@YAP1 | |||
}} |
Revision as of 10:00, 11 January 2014
Short description: | p4@YAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_YAP1_5end |
Coexpression cluster: | C3068_epidermoid_pharyngeal_aorta_amniotic_chorionic_Hep2_mature |
Association with transcript: | -326bp_to_ENST00000282441, ENST00000526343, NM_001130145, NM_001195044, NM_006106_5end |
EntrezGene: | YAP1 |
HGNC: | 16262 |
UniProt: | E9PRV2E3WEB6P46937Q86T74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.34e-12 | 76 |
endodermal cell | 6.76e-09 | 58 |
epithelial cell | 9.19e-08 | 253 |
skin fibroblast | 2.49e-07 | 23 |
embryonic cell | 7.83e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.69e-20 | 160 |
endoderm | 9.69e-20 | 160 |
presumptive endoderm | 9.69e-20 | 160 |
digestive system | 1.22e-17 | 145 |
digestive tract | 1.22e-17 | 145 |
primitive gut | 1.22e-17 | 145 |
trunk | 4.41e-16 | 199 |
subdivision of digestive tract | 1.16e-13 | 118 |
trunk mesenchyme | 5.88e-12 | 122 |
surface structure | 5.92e-12 | 99 |
mesenchyme | 7.25e-12 | 160 |
entire embryonic mesenchyme | 7.25e-12 | 160 |
primordium | 4.51e-10 | 160 |
endo-epithelium | 9.16e-09 | 82 |
foregut | 1.05e-08 | 87 |
respiratory system | 4.20e-08 | 74 |
reproductive structure | 7.72e-08 | 59 |
reproductive system | 7.72e-08 | 59 |
trunk region element | 8.98e-08 | 101 |
unilaminar epithelium | 9.61e-08 | 148 |
larynx | 1.06e-07 | 9 |
subdivision of trunk | 2.27e-07 | 112 |
respiratory primordium | 4.62e-07 | 38 |
endoderm of foregut | 4.62e-07 | 38 |
multilaminar epithelium | 5.43e-07 | 83 |
integument | 5.75e-07 | 46 |
integumental system | 5.75e-07 | 46 |
gut epithelium | 9.04e-07 | 54 |