FFCP PHASE1:Hg19::chr10:88718397..88718424,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6623 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11141 | |||
|TSSclassifier=strong | |||
|UniProt=O76070 | |||
|association_with_transcript=0bp_to_ENST00000372017_5end | |||
|coexpression_cluster_id=C247 | |||
|description=CAGE_peak_3_at_SNCG_5end | |||
|id=chr10:88718397..88718424,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.50e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.96e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.21e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.89e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-38!115;UBERON:0001049!5.80e-28!57;UBERON:0005068!5.80e-28!57;UBERON:0006241!5.80e-28!57;UBERON:0007135!5.80e-28!57;UBERON:0000477!1.69e-27!286;UBERON:0004111!3.53e-24!241;UBERON:0002616!4.78e-23!59;UBERON:0003075!1.20e-22!86;UBERON:0007284!1.20e-22!86;UBERON:0002346!9.13e-21!90;UBERON:0000955!2.01e-20!69;UBERON:0006238!2.01e-20!69;UBERON:0001017!2.40e-20!82;UBERON:0005743!8.45e-20!86;UBERON:0000033!5.87e-19!123;UBERON:0003080!8.85e-19!42;UBERON:0000153!1.04e-18!129;UBERON:0007811!1.04e-18!129;UBERON:0000025!3.65e-18!194;UBERON:0002780!3.75e-18!41;UBERON:0001890!3.75e-18!41;UBERON:0006240!3.75e-18!41;UBERON:0000064!9.81e-18!219;UBERON:0000119!1.15e-17!312;UBERON:0002020!1.48e-17!34;UBERON:0003528!1.48e-17!34;UBERON:0001893!2.16e-17!34;UBERON:0000483!2.27e-17!309;UBERON:0002791!1.13e-16!33;UBERON:0001869!2.53e-16!32;UBERON:0000073!3.80e-16!94;UBERON:0001016!3.80e-16!94;UBERON:0000475!4.33e-15!365;UBERON:0003056!9.79e-15!61;UBERON:0000481!1.32e-14!347;UBERON:0002619!4.52e-14!22;UBERON:0004121!2.07e-13!169;UBERON:0000467!2.15e-13!625;UBERON:0000480!3.28e-13!626;UBERON:0001950!1.30e-12!20;UBERON:0000924!1.37e-12!173;UBERON:0006601!1.37e-12!173;UBERON:0000468!3.79e-12!659;UBERON:0000956!9.95e-12!25;UBERON:0000203!9.95e-12!25;UBERON:0003076!1.61e-10!15;UBERON:0003057!1.61e-10!15;UBERON:0000922!5.24e-09!612;UBERON:0000062!5.89e-09!511;UBERON:0004732!6.00e-09!13;UBERON:0000063!1.90e-08!97;UBERON:0004733!2.29e-08!12;UBERON:0002028!2.29e-08!12;UBERON:0007277!2.29e-08!12;UBERON:0002050!2.64e-08!605;UBERON:0005423!2.64e-08!605;UBERON:0000923!3.59e-08!604;UBERON:0005291!3.59e-08!604;UBERON:0006598!3.59e-08!604;UBERON:0002532!3.59e-08!604;UBERON:0002308!1.51e-07!9;UBERON:0000125!1.51e-07!9;UBERON:0002420!1.66e-07!9;UBERON:0007245!1.66e-07!9;UBERON:0010009!1.66e-07!9;UBERON:0010011!1.66e-07!9;UBERON:0000454!1.66e-07!9;UBERON:0002298!3.23e-07!8;UBERON:0001004!7.79e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.10e-22;34!UBERON:0003528;4.81e-22;34!UBERON:0002020;4.81e-22;34!UBERON:0001869;1.20e-21;32!UBERON:0002791;2.42e-21;32!UBERON:0002619;6.26e-20;22!UBERON:0000073;7.43e-20;53!UBERON:0002616;7.43e-20;53!UBERON:0002780;1.91e-19;41!UBERON:0001890;1.91e-19;41!UBERON:0001950;1.30e-17;20!UBERON:0000956;9.59e-17;25!UBERON:0000203;9.59e-17;25!UBERON:0007023;1.50e-13;114!UBERON:0000955;5.07e-13;68!UBERON:0001017;5.57e-13;75!UBERON:0000125;3.15e-11;9!UBERON:0002308;3.15e-11;9!UBERON:0002420;3.77e-11;9!UBERON:0007245;3.77e-11;9!UBERON:0010009;3.77e-11;9!UBERON:0010011;3.77e-11;9!UBERON:0000454;3.77e-11;9!UBERON:0004732;8.08e-11;13!UBERON:0001016;1.22e-10;83!UBERON:0004733;6.64e-10;12!UBERON:0002028;6.64e-10;12!UBERON:0002298;5.14e-09;6!UBERON:0009663;9.02e-09;7!UBERON:0000200;1.13e-08;6!UBERON:0001737;8.22e-08;9!UBERON:0001557;8.22e-08;9!UBERON:0000349;1.75e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.41e-53,114;UBERON:0001049,3.53e-39,56;UBERON:0005068,3.53e-39,56;UBERON:0006241,3.53e-39,56;UBERON:0007135,3.53e-39,56;UBERON:0000073,1.02e-35,53;UBERON:0002616,1.02e-35,53;UBERON:0000955,5.57e-28,68;UBERON:0006238,5.57e-28,68;UBERON:0001017,1.03e-27,81;UBERON:0003075,2.02e-27,82;UBERON:0007284,2.02e-27,82;UBERON:0002780,5.54e-27,41;UBERON:0001890,5.54e-27,41;UBERON:0003080,5.54e-27,41;UBERON:0006240,5.54e-27,41;UBERON:0003528,5.52e-26,34;UBERON:0002020,5.52e-26,34;UBERON:0001893,1.00e-25,34;UBERON:0002346,2.75e-25,86;UBERON:0001016,2.20e-24,89;UBERON:0001869,5.27e-24,32;UBERON:0002791,1.26e-23,32;UBERON:0004111,1.15e-21,240;UBERON:0010314,9.20e-21,132;UBERON:0010371,2.43e-20,104;UBERON:0002619,7.48e-20,22;UBERON:0003056,1.01e-17,61;UBERON:0011216,1.05e-17,223;UBERON:0001950,1.56e-17,20;UBERON:0000956,1.12e-16,25;UBERON:0000203,1.12e-16,25;UBERON:0000025,3.72e-16,192;UBERON:0004121,1.34e-13,171;UBERON:0000924,1.34e-13,171;UBERON:0006601,1.34e-13,171;UBERON:0003076,3.20e-13,15;UBERON:0003057,3.20e-13,15;UBERON:0000125,3.18e-11,9;UBERON:0002308,3.18e-11,9;UBERON:0002420,3.72e-11,9;UBERON:0007245,3.72e-11,9;UBERON:0010009,3.72e-11,9;UBERON:0010011,3.72e-11,9;UBERON:0000454,3.72e-11,9;UBERON:0004732,8.76e-11,13;UBERON:0004733,7.28e-10,12;UBERON:0002028,7.28e-10,12;UBERON:0007277,7.28e-10,12;UBERON:0000483,1.71e-09,306;UBERON:0000119,3.61e-09,309;UBERON:0002298,5.44e-09,6;UBERON:0009663,8.90e-09,7;UBERON:0000200,1.14e-08,6;UBERON:0001737,4.59e-08,9;UBERON:0000349,1.74e-07,5;UBERON:0002050,9.34e-07,564 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,0,1.39560233594486,0,0,0.618831764800233,0.662794751455832,0,0.602694528023977,0,0,1.35433163884467,0.612002073732759,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.02420515822182,0.255725123687061,2.1686349143074,3.00802746381534,3.33146993609895,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.087834785693126,3.99486180268024,1.82147644146271,0.741568885568859,0,0,0,0,0,0,0.39752481473341,0.860234595106124,1.73570250803797,3.95715559346807,0.419499436209906,1.37559020970034,1.04497483268405,1.8089173141853,2.49036383880697,1.00416183829401,4.02829317109147,10.6438094800592,4.14905497831888,1.83831540172934,1.62028389576352,1.07159673940896,2.2452937262617,0.675668882899933,0,0,0.366403487860815,0,0,0.872188104285069,0,0.379891534993739,0.662045904066094,0,0,0,0,0,0.933633106199299,0.942974704487816,0.653847612453835,0.302714855289863,0,0.234321431833797,0.624320153660641,1.1409436430889,0.149448680551801,0.23486899728753,0,0,0.61246251376468,0.245668634623536,0.206651562351531,0,0,0,2.87447256726495,0.168336113954066,0.375355559615893,0,0,0,0.300476117813194,0,0.179389635688862,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0.757301322732344,0.0920498986422993,0,0.355009592516614,0.705264687593482,0.169560592310488,0.773043412653187,0.545492241181669,0.286804595389004,0,0.397589304964456,1.16193942869518,1.34759371519982,0,0.72995471815166,1.56449532329816,0.643240938192885,0,0,0.721879481669586,2.36613600079688,2.52877035117153,1.68707720918437,2.86764329104224,2.83243277320128,1.89816495288877,3.23595139584395,3.13954344200554,1.53898862778556,3.69077727312324,0,0.8231480226628,2.94017422771084,0,0,0.590789906681404,0,0,0.171567810298526,0.658501712451753,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,1.29929802984966,2.31492756288305,1.90254152234598,0,0,0,0,0,1.87467667973554,1.17587489739202,0.283550194484773,0.716468181622786,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0,21.4593867511129,0,0,0,0.257207374262142,4.25547396069835,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,3.13281851940385,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.813472649219715,0.120859449591622,1.40354529212299,0,0,0,0.131124414959424,0,0,0.784349769176855,0,0.211103257785751,2.27466768141793,1.36074964221213,0.431831832204279,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.644521469209642,1.0151168573996,0.170453254832202,0.178064071293475,0.826424576804891,1.15314040419064,0.510450849978337,0.2023155617111,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0.767693373934002,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.235624804691373,1.01091240786658,3.17020642346017,0.421258456238981,0,0.243713489631284,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0.876901770507525,1.73632660280006,1.9676842561399,0,0.6196469961995,0.281695602532241,0.286822704408103,0.0982490410131212,0,0,8.44430541190656,1.31717957183961,0.379473173765715,0.349934720244983,0.0962221127255121,0,1.08890984861323,0.188287601553558,0.86101074534246,3.36942951335251,3.54744122829341,1.37834040124176,0,0,0,0,0,0,0,0,0.640944426764839,0.962479855263359,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,11.7206543417515,0.36408156524854,0,0,0,0,0,30.8185770807552,38.121411847249,0,0,0.211125408127993,3.58646378851925,1.10513566212459,0,0.102268682502155,0,0,0,0,0,2.86065876347107,0,0,14.5399911914283,19.6668368103125,0,0,0,8.69999490521752,2.16207551742449,7.62760950878299,0.236387681767936,3.10269035917318,0,0,9.74315524395223,9.52711865140723,13.7323562685375,5.19722521676756,13.5951904718632,31.810882587326,0.762569244632931,0.139423744278603,2.92410982314429,0,0,0.179515288819544,0,0,0.183195186803725,3.19820865611181,0,0,0,2.03036094555463,0.980312671588698,0.839107934879214,0,0,0,0,0,0,0,1.23840590304675,1.83309043480088,0,0,0,4.65067817566672,2.40773294189637,40.762013556209,0,2.73930466504926,0.242780379534093,3.15667522279512,1.20990716048664,0.30607276163049,1.76922422959766,0,0,0,0,0,0,1.13843818411917,0,0,0.391969589657511,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| |||
|short_description=p3@SNCG | |||
}} |
Revision as of 03:56, 11 January 2014
Short description: | p3@SNCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNCG_5end |
Coexpression cluster: | C247_pons_locus_medulla_spinal_paracentral_medial_occipital |
Association with transcript: | 0bp_to_ENST00000372017_5end |
EntrezGene: | SNCG |
HGNC: | 11141 |
UniProt: | O76070 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.21e-08 | 24 |