FFCP PHASE1:Hg19::chr10:8087205..8087216,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_at_chr10:8087205..8087216,+ | |||
|id=chr10:8087205..8087216,+ | |||
|ontology_enrichment_celltype=CL:0000946!4.72e-08!1;CL:0000786!4.72e-08!1;CL:0000980!4.72e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000214;4.09e-23;3!CL:0002327;8.69e-18;4!CL:0000153;1.21e-08;9!CL:0000447;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,4.09e-23,3;CL:0002327,8.69e-18,4;CL:0000153,1.21e-08,9;CL:0000447,1.21e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.39e-66;1 | |||
|ontology_enrichment_disease=DOID:5093!6.37e-17!4;DOID:1612!6.37e-17!4;DOID:9119!1.22e-08!1;DOID:5662!2.89e-08!1;DOID:0050687!6.63e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.69e-18;4!DOID:1612;8.69e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.69e-18,4;DOID:1612,8.69e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0006947!2.25e-10!3;UBERON:0004054!2.25e-10!3;UBERON:0002294!1.58e-09!7;UBERON:0001173!1.58e-09!7;UBERON:0004912!1.58e-09!7;UBERON:0000998!1.63e-08!1;UBERON:0006868!1.63e-08!1;UBERON:0001301!2.69e-08!1;UBERON:0004913!3.83e-08!1;UBERON:0003703!3.83e-08!1;UBERON:0001174!3.83e-08!1;UBERON:0004914!3.83e-08!1;UBERON:0005904!5.45e-08!4;UBERON:0000997!6.24e-08!1;UBERON:0005056!6.24e-08!1;UBERON:0002394!7.97e-08!4;UBERON:0003928!7.97e-08!4;UBERON:0000310!4.75e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;4.09e-23;3!UBERON:0007616;4.09e-23;3!UBERON:0002217;4.09e-23;3!UBERON:0002018;4.09e-23;3!UBERON:0001911;8.69e-18;4!UBERON:0004905;1.47e-09;8!UBERON:0000982;1.47e-09;8!UBERON:0004770;1.47e-09;8!UBERON:0004457;1.21e-08;9!UBERON:0000042;1.21e-08;9!UBERON:0000310;6.13e-08;10!UBERON:0001443;2.47e-07;11!UBERON:0000486;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.09e-23,3;UBERON:0007616,4.09e-23,3;UBERON:0002217,4.09e-23,3;UBERON:0002018,4.09e-23,3;UBERON:0001911,8.69e-18,4;UBERON:0005333,8.69e-18,4;UBERON:0008425,8.69e-18,4;UBERON:0005311,8.69e-18,4;UBERON:0000076,1.35e-09,8;UBERON:0004905,1.47e-09,8;UBERON:0000982,1.47e-09,8;UBERON:0004770,1.47e-09,8;UBERON:0000310,6.13e-08,10;UBERON:0001443,2.47e-07,11;UBERON:0004457,8.38e-07,12;UBERON:0000042,8.38e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,4.89775999978696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41994405973866,0,0,0,0,0,0,0,0,12.5431516001323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:8087205..8087216,+ | |||
}} |
Revision as of 01:38, 11 January 2014
Short description: | p@chr10:8087205..8087216, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8087205..8087216, + |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 4.09e-23 | 3 |
mammary gland epithelial cell | 8.69e-18 | 4 |
GAG secreting cell | 1.21e-08 | 9 |
carbohydrate secreting cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.09e-23 | 3 |
layer of synovial tissue | 4.09e-23 | 3 |
synovial joint | 4.09e-23 | 3 |
synovial membrane of synovial joint | 4.09e-23 | 3 |
mammary gland | 8.69e-18 | 4 |
mammary bud | 8.69e-18 | 4 |
mammary ridge | 8.69e-18 | 4 |
mammary placode | 8.69e-18 | 4 |
external ectoderm | 1.35e-09 | 8 |
articulation | 1.47e-09 | 8 |
skeletal joint | 1.47e-09 | 8 |
articular system | 1.47e-09 | 8 |
breast | 6.13e-08 | 10 |
chest | 2.47e-07 | 11 |
cavity lining | 8.38e-07 | 12 |
serous membrane | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.69e-18 | 4 |
breast cancer | 8.69e-18 | 4 |