FFCP PHASE1:Hg19::chr10:79617081..79617125,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_at_chr10:79617081..79617125,- | |||
|id=chr10:79617081..79617125,- | |||
|ontology_enrichment_celltype=CL:0002541!5.60e-11!3;CL:0002623!2.40e-10!3;CL:0002536!3.81e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.66e-21;3!CL:0000039;1.23e-09;7!CL:0000586;1.23e-09;7!CL:0002623;1.63e-09;3!CL:0000349;1.11e-08;19!CL:0000313;1.06e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.66e-21,3;CL:0000039,1.23e-09,7;CL:0000586,1.23e-09,7;CL:0002623,1.82e-09,3;CL:0000349,1.15e-08,19;CL:0000313,1.14e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.37e-14;2!UBERON:0003124;1.65e-08;1!UBERON:0005754;2.90e-08;1 | |||
|ontology_enrichment_disease=DOID:5093!2.31e-08!4;DOID:1612!2.31e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.82e-16;4!DOID:1612;6.82e-16;4!DOID:1799;2.04e-08;1!DOID:10165;2.04e-08;1!DOID:1798;2.04e-08;1!DOID:178;1.06e-07;1!DOID:326;1.06e-07;1!DOID:3978;1.06e-07;1!DOID:3394;1.06e-07;1!DOID:2152;1.06e-07;1!DOID:5844;1.06e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.49e-16,4;DOID:1612,6.49e-16,4;DOID:1799,2.04e-08,1;DOID:10165,2.04e-08,1;DOID:1798,2.04e-08,1;DOID:178,9.29e-08,1;DOID:326,9.29e-08,1;DOID:3978,9.29e-08,1;DOID:3394,9.29e-08,1;DOID:5844,9.29e-08,1;DOID:2152,1.14e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.71e-14!14;UBERON:0000158!4.71e-14!14;UBERON:0007023!1.36e-13!115;UBERON:0006947!4.30e-11!3;UBERON:0004054!4.30e-11!3;UBERON:0000476!5.60e-11!3;UBERON:0000920!5.60e-11!3;UBERON:0003135!3.76e-10!11;UBERON:0005904!2.09e-08!4;UBERON:0003124!4.01e-08!7;UBERON:0003101!4.75e-08!22;UBERON:0000079!4.75e-08!22;UBERON:0000478!1.36e-07!24;UBERON:0000305!1.49e-07!7;UBERON:0003408!1.50e-07!10;UBERON:0005156!2.88e-07!59;UBERON:0000990!2.88e-07!59;UBERON:0000007!4.32e-07!2;UBERON:0003133!6.22e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.87e-21;3!UBERON:0004054;3.87e-21;3!UBERON:0003124;6.66e-21;3!UBERON:0000920;6.66e-21;3!UBERON:0005631;1.15e-16;10!UBERON:0000158;1.15e-16;10!UBERON:0005904;5.29e-16;4!UBERON:0000310;5.84e-11;10!UBERON:0001443;5.63e-10;11!UBERON:0000478;1.11e-09;24!UBERON:0001000;2.71e-08;1!UBERON:0005352;2.71e-08;1!UBERON:0000998;2.90e-08;1!UBERON:0006868;2.90e-08;1!UBERON:0001301;5.05e-08;1!UBERON:0004911;1.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.87e-21,3;UBERON:0004054,3.87e-21,3;UBERON:0000920,6.66e-21,3;UBERON:0005631,6.06e-17,14;UBERON:0000158,6.06e-17,14;UBERON:0005904,5.30e-16,4;UBERON:0003124,6.71e-16,7;UBERON:0000310,5.69e-11,10;UBERON:0001443,5.50e-10,11;UBERON:0000478,1.15e-09,24;UBERON:0001000,2.71e-08,1;UBERON:0005352,2.71e-08,1;UBERON:0000998,2.90e-08,1;UBERON:0006868,2.90e-08,1;UBERON:0001301,5.05e-08,1;UBERON:0004911,1.14e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2726571734706,7.72637545885385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.373477111646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2223831153723,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,4.05865624054073,0,7.37185685038157,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.690503839458535,0,0,0,0,0,10.1566826823241,0,3.62499787717397,0,0,7.56440581657396,0,0,0,0,0,0,0,0,0,1.52513848926586,0,0.153900517007594,0,118.048719046687,59.6888335324985,34.2239221554325,10.2080371114214,4.48828207669125,15.4580085045404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,22.0967265595659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46488672495512,0,0,0,0,0.0969890164884194,0,0,0,0,0,4.88878456837007,0,0.426905989478705,0,0,0,0,0,0,4.71388069233591,0,0,0,0,0,0,0,0,0,0,0,0,1.99679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,44.5241380618418,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.227662191351298,123.739806376881,0,0,0.0679697329768317,0,0,0,1.80534113556182,0,2.24217730651031,0,0,0,0,0,0,0,0,0.828864656652147,1.19502933965765,2.07377898544228,0,0,0,18.2056431582099,0,0,0,1.23040974977572,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0,0,0.426467963801962,0,0.129177819672012,0.124149428591716,0,0.12729431655633,4.04234377916439,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:79617081..79617125,- | |||
}} |
Revision as of 03:39, 11 January 2014
Short description: | p@chr10:79617081..79617125, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:79617081..79617125, - |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.66e-21 | 3 |
germ line cell | 1.23e-09 | 7 |
germ cell | 1.23e-09 | 7 |
acinar cell of salivary gland | 1.82e-09 | 3 |
extraembryonic cell | 1.15e-08 | 19 |
serous secreting cell | 1.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.87e-21 | 3 |
internal male genitalia | 3.87e-21 | 3 |
egg chorion | 6.66e-21 | 3 |
extraembryonic membrane | 6.06e-17 | 14 |
membranous layer | 6.06e-17 | 14 |
duct of male reproductive system | 5.30e-16 | 4 |
chorion | 6.71e-16 | 7 |
breast | 5.69e-11 | 10 |
chest | 5.50e-10 | 11 |
extraembryonic structure | 1.15e-09 | 24 |
vas deferens | 2.71e-08 | 1 |
spermatic cord | 2.71e-08 | 1 |
seminal vesicle | 2.90e-08 | 1 |
seminal fluid secreting gland | 2.90e-08 | 1 |
epididymis | 5.05e-08 | 1 |
epithelium of female gonad | 1.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.49e-16 | 4 |
breast cancer | 6.49e-16 | 4 |
islet cell tumor | 2.04e-08 | 1 |
endocrine pancreas cancer | 2.04e-08 | 1 |
pancreatic endocrine carcinoma | 2.04e-08 | 1 |
vascular disease | 9.29e-08 | 1 |
ischemia | 9.29e-08 | 1 |
extrinsic cardiomyopathy | 9.29e-08 | 1 |
myocardial ischemia | 9.29e-08 | 1 |
myocardial infarction | 9.29e-08 | 1 |
ovary epithelial cancer | 1.14e-07 | 1 |