FFCP PHASE1:Hg19::chr10:30025922..30025958,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6840 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-58bp_to_uc009xld.1_5end | |||
|description=CAGE_peak_3_at_SVIL_5end | |||
|id=chr10:30025922..30025958,- | |||
|ontology_enrichment_celltype=CL:0002139!2.14e-12!24;CL:0000115!4.25e-12!35;CL:0002078!1.70e-11!44;CL:0000071!1.82e-09!18;CL:0002546!1.82e-09!18;CL:1000449!5.02e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.34e-12;24!CL:0000115;1.09e-10;36!CL:0000071;1.38e-09;18!CL:0002078;3.27e-08;45!CL:1000449;2.26e-07;15!CL:1000497;6.26e-07;17!CL:0002518;6.26e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.14e-13,36;CL:0002139,1.31e-12,24;CL:0002078,3.00e-12,45;CL:0000071,1.27e-09,18;CL:0002546,1.27e-09,18;CL:1000449,3.28e-07,15;CL:0000222,7.59e-07,121;CL:1000497,8.73e-07,17;CL:0002518,8.73e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;1.38e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.99e-33!659;UBERON:0000467!1.17e-31!625;UBERON:0000480!3.66e-31!626;UBERON:0002050!7.86e-29!605;UBERON:0005423!7.86e-29!605;UBERON:0000922!1.79e-28!612;UBERON:0000923!3.45e-28!604;UBERON:0005291!3.45e-28!604;UBERON:0006598!3.45e-28!604;UBERON:0002532!3.45e-28!604;UBERON:0000926!6.05e-23!448;UBERON:0004120!6.05e-23!448;UBERON:0006603!6.05e-23!448;UBERON:0001009!5.14e-20!113;UBERON:0004535!1.25e-19!110;UBERON:0002049!3.28e-18!79;UBERON:0007798!3.28e-18!79;UBERON:0000477!3.57e-18!286;UBERON:0004111!4.10e-16!241;UBERON:0003914!5.04e-16!118;UBERON:0000055!2.10e-14!69;UBERON:0003081!2.20e-14!216;UBERON:0001981!6.65e-13!60;UBERON:0007500!6.65e-13!60;UBERON:0004537!6.65e-13!60;UBERON:0006965!6.65e-13!60;UBERON:0004872!2.61e-11!84;UBERON:0000062!3.21e-11!511;UBERON:0000481!4.55e-10!347;UBERON:0001986!1.82e-09!18;UBERON:0004638!1.82e-09!18;UBERON:0004852!1.82e-09!18;UBERON:0005256!2.37e-09!143;UBERON:0000119!3.25e-09!312;UBERON:0000483!6.30e-09!309;UBERON:0000025!7.22e-09!194;UBERON:0001637!1.97e-08!42;UBERON:0003509!1.97e-08!42;UBERON:0004572!1.97e-08!42;UBERON:0004876!2.61e-08!20;UBERON:0000058!6.94e-08!26;UBERON:0000479!8.35e-08!787;UBERON:0000080!8.46e-08!18;UBERON:0002120!8.46e-08!18;UBERON:0004875!8.46e-08!18;UBERON:0005721!8.46e-08!18;UBERON:0005754!8.46e-08!18;UBERON:0007297!8.46e-08!18;UBERON:0002553!1.01e-07!70;UBERON:0003104!1.43e-07!238;UBERON:0009142!1.43e-07!238;UBERON:0004573!1.45e-07!33;UBERON:0004571!1.45e-07!33;UBERON:0000487!1.66e-07!22;UBERON:0006555!2.07e-07!17;UBERON:0005103!2.07e-07!17;UBERON:0000083!2.07e-07!17;UBERON:0009201!2.07e-07!17;UBERON:0004819!2.07e-07!17;UBERON:0006553!2.07e-07!17;UBERON:0003074!2.07e-07!17;UBERON:0003060!2.07e-07!17;UBERON:0003103!3.58e-07!69;UBERON:0002100!3.87e-07!216;UBERON:0003064!3.91e-07!37;UBERON:0000947!4.99e-07!21;UBERON:0010191!4.99e-07!21;UBERON:0004211!5.02e-07!16;UBERON:0001285!5.02e-07!16;UBERON:0007684!5.02e-07!16;UBERON:0003220!5.02e-07!16;UBERON:0004208!5.02e-07!16;UBERON:0000165!9.37e-07!28;UBERON:0000930!9.37e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.38e-09;18!UBERON:0001986;1.38e-09;18!UBERON:0004852;1.38e-09;18!UBERON:0000055;7.20e-08;65!UBERON:0002049;1.25e-07;75!UBERON:0007798;1.25e-07;75!UBERON:0000487;1.91e-07;22!UBERON:0003914;2.05e-07;74!UBERON:0006555;2.26e-07;15!UBERON:0004819;2.26e-07;15!UBERON:0001285;2.26e-07;15!UBERON:0007684;2.26e-07;15!UBERON:0004535;2.94e-07;109!UBERON:0004573;3.14e-07;33!UBERON:0004571;3.14e-07;33!UBERON:0000165;4.30e-07;28!UBERON:0000947;4.90e-07;21!UBERON:0010191;4.90e-07;21!UBERON:0001637;6.00e-07;42!UBERON:0003509;6.00e-07;42!UBERON:0004572;6.00e-07;42 | |||
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| |||
|short_description=p3@SVIL | |||
}} |
Revision as of 02:23, 11 January 2014
Short description: | p3@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SVIL_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_uc009xld.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.14e-13 | 36 |
endothelial cell of vascular tree | 1.31e-12 | 24 |
meso-epithelial cell | 3.00e-12 | 45 |
blood vessel endothelial cell | 1.27e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.27e-09 | 18 |
epithelial cell of nephron | 3.28e-07 | 15 |
mesodermal cell | 7.59e-07 | 121 |
kidney cell | 8.73e-07 | 17 |
kidney epithelial cell | 8.73e-07 | 17 |