FFCP PHASE1:Hg19::chr10:17277365..17277388,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_at_chr10:17277365..17277388,- | |||
|id=chr10:17277365..17277388,- | |||
|ontology_enrichment_celltype=CL:0000055!1.06e-24!180;CL:0002371!2.65e-19!591;CL:0000144!6.94e-17!625;CL:0000057!4.66e-15!75;CL:0000548!2.02e-12!679;CL:0000004!2.02e-12!679;CL:0000255!2.02e-12!679;CL:0000048!4.47e-12!430;CL:0000012!1.00e-11!682;CL:0000723!1.64e-11!436;CL:0000034!1.23e-10!444;CL:0000222!2.55e-09!119;CL:0000003!4.67e-08!722;CL:0000680!7.89e-08!57;CL:0000056!7.89e-08!57;CL:0000355!7.89e-08!57;CL:0002620!8.88e-08!23;CL:0000187!1.15e-07!54;CL:0000393!2.21e-07!60;CL:0000211!2.21e-07!60;CL:0000183!4.27e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.44e-10;23!CL:0000057;8.33e-08;73!CL:0002570;1.05e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.30e-20,76;CL:0000048,3.04e-11,427;CL:0000723,7.56e-11,433;CL:0000034,6.24e-10,441;CL:0002620,1.78e-09,23;CL:0002570,1.06e-07,8;CL:0000187,1.49e-07,55;CL:0000222,2.18e-07,121;CL:0000680,2.76e-07,58;CL:0000056,2.76e-07,58;CL:0000355,2.76e-07,58;CL:0000393,3.83e-07,61;CL:0000211,3.83e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.45e-10!110;UBERON:0000914!2.53e-10!83;UBERON:0002329!2.53e-10!83;UBERON:0003077!2.53e-10!83;UBERON:0003059!2.53e-10!83;UBERON:0007282!2.53e-10!83;UBERON:0009618!2.53e-10!83;UBERON:0007285!2.53e-10!83;UBERON:0002049!6.38e-10!79;UBERON:0007798!6.38e-10!79;UBERON:0001009!1.73e-09!113;UBERON:0002204!1.86e-09!167;UBERON:0004290!5.74e-09!70;UBERON:0000486!2.29e-08!82;UBERON:0003081!8.55e-08!216;UBERON:0001013!1.69e-07!14;UBERON:0000055!2.96e-07!69;UBERON:0004872!3.61e-07!84;UBERON:0002199!4.87e-07!45;UBERON:0002416!4.87e-07!45;UBERON:0001134!6.02e-07!61;UBERON:0002036!6.02e-07!61;UBERON:0003082!6.02e-07!61;UBERON:0002385!7.80e-07!63;UBERON:0001015!7.80e-07!63;UBERON:0000383!7.80e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.13e-10;14!UBERON:0002199;1.34e-07;46!UBERON:0002416;1.34e-07;46!UBERON:0004905;6.96e-07;8!UBERON:0000982;6.96e-07;8!UBERON:0004770;6.96e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,8.28e-11,46;UBERON:0002416,8.28e-11,46;UBERON:0001013,1.81e-10,14;UBERON:0007524,3.40e-10,73;UBERON:0002329,6.82e-10,71;UBERON:0003059,6.82e-10,71;UBERON:0007282,6.82e-10,71;UBERON:0004290,6.82e-10,71;UBERON:0009618,6.82e-10,71;UBERON:0003077,1.38e-09,72;UBERON:0007285,1.38e-09,72;UBERON:0002049,1.57e-09,78;UBERON:0007798,1.57e-09,78;UBERON:0007503,3.59e-09,78;UBERON:0004535,4.35e-09,109;UBERON:0000486,9.35e-09,83;UBERON:0001009,1.88e-08,112;UBERON:0002097,3.92e-08,41;UBERON:0004872,3.52e-07,83;UBERON:0004905,6.03e-07,8;UBERON:0000982,6.03e-07,8;UBERON:0004770,6.03e-07,8;UBERON:0001134,9.87e-07,62;UBERON:0002036,9.87e-07,62;UBERON:0003082,9.87e-07,62 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.563817616383885,1.0007329835313,0.893922188854576,1.74467704820074,2.53299878168311,1.26343974685366,2.87304191019822,0,0,0,0.527533956456907,5.19818682432196,4.63956326019082,1.34465029290355,1.20538905604795,1.46062018077475,1.46379839637152,0.61560529038394,1.63200552995402,3.13454721478088,7.15589967827642,4.92747930262383,3.76627918784408,0.152826811495903,0.0821005894499457,0,0.393364276848904,0,0.464448369948228,0,0,0.369754010166788,0,0,0.587200878669695,1.66198622559563,0.802177789880567,0.868043482863407,0.223915474239924,0,0.515151135268373,0.436194716338694,0,0.242584061187816,0.464858073811369,0.411167888021826,0.929119112685311,1.7261543539329,0.768482119587302,0.945928919554341,2.41321976515633,0,1.35426486594342,1.12945403725563,0.545812300115692,0.898893937780338,2.14258724659632,0,0,1.64925650093358,0.598390972864896,0.426224750532694,1.45104619314292,0.56738522469114,0,0.75374599577023,0,0.217188844705117,3.02699751316684,1.47311054395026,0.949387162322653,0,0.850417199860174,0.209658645508376,0.898629049171961,0.300353785683013,0,0,0.79566670879636,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.196709770113833,1.57204305099666,0.616804496998528,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.640456598628376,0.260118695119756,1.31550323682941,0.829050053357545,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.534880391567015,0.144824403882799,0,1.34140171940727,2.04580098949649,2.53007406669196,1.00267582127178,7.82171202388448,0,0.973269740605272,2.9305793320861,4.43458794925128,2.63504357079378,0.523916301990851,0,0,1.9472843619281,0.696518949197069,2.6591592103773,1.19245312152671,0,0,0.198762407366705,0,1.38856200643038,0,3.35599548967925,4.12677062910101,0.626984899610432,1.8089173141853,0.35576626268671,0.66944122552934,3.62546385398232,0.760272105718513,4.39311703586705,1.47065232138347,2.43042584364528,0.714397826272638,1.34717623575702,0.788280363383256,0,0,2.38162267109529,0,0,0.436094052142534,1.98788780678127,2.15271869829786,3.31022952033047,2.0078563452417,1.77334191099179,3.36406560085384,0,4.9333509683432,0,1.34710672069688,1.47115712802113,0.605429710579726,2.30470369792,0.70296429550139,3.74592092196385,0,11.8064457635923,3.87533845524424,3.39933183173076,3.93262258766296,1.83738754129404,6.01888154827663,2.16984140469107,0,3.95627086845691,0,1.43723628363248,3.70339450698946,1.00094815897571,0.277064115484183,0,6.12975591598039,2.40380894250555,3.62982986112067,3.94657198515496,2.34913127700424,1.05965950579781,4.80145753735044,0.824420233907511,4.89517026086695,1.11670113798954,3.88185564154912,1.46155507741798,6.81571190459109,2.48534726334208,0.646584227275248,1.06502877754984,1.30977727695932,2.88253006927829,0.193260853163297,0.272746120590835,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,5.78916844373597,4.14404764057442,5.57241513638375,15.8813485967309,0.473227200159376,0,0.482022059766964,0.661763836394364,0,0.237270619111097,0.674156540800822,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0,2.05881372358231,0.329250856225877,1.1240175325762,0,0.0925884451585296,0.651616610620649,2.07986957055916,1.44331342025273,7.07175470347969,0.587043471179108,2.59859605969933,1.85194205030644,4.56609965363036,0,0,0.984868024349589,1.40402559083543,1.0404181360211,0,0.16798212819886,0.283550194484773,2.50763863567975,1.45316969256981,1.91691339582606,0,0.528290604079356,0.414656231081544,0.432359860250884,0.25248486685276,0.825472625798197,0,0,3.4214489204541,1.23392991243988,1.50171528921959,0.285826432630578,0.112131084345361,0,0.5867062865676,1.29271715757778,7.15312891703765,8.45302752556,1.06375246633948,1.04007436911366,1.54324424557285,0,1.0656887160644,2.00169191121407,0.542621605391443,3.29296134712308,3.58309802723109,1.06617584622764,1.58390374586686,0.904318131178758,0,0.799783929456456,1.2162378064119,0.502257091432126,0,1.67737398844108,1.14861935834114,0,1.44781306667579,0.821905290201534,0.179060963239896,0.448340575974109,0.394061520403854,0.215627574859517,0.128343036279748,0.254094624222463,0,0.773288812777695,1.50764638800914,1.91381625495949,0,0,0,3.55805325985506,7.50255781589516,2.98391526069709,7.69492187663986,11.062597305424,8.83133524190034,2.22568688486155,0.902838299183157,2.27407504055985,2.0694614258501,1.32845119707087,0.737476674166813,3.5622281931914,0.195801157462741,0.343143423810856,0.413536052245775,0.647142602455851,0.426910231213777,0.606255142892519,0,1.20956117331872,0,1.53461973288062,1.96462066103151,0.384417447767103,1.02341449813341,0.482561763430822,1.48418066444991,2.92998418225046,4.6166048581413,1.97105174433142,1.03850885836724,5.46188778761808,0.120859449591622,0.200506470303285,0,0.34444334449382,1.82091168006717,2.36023946926963,1.35359883872224,1.5403067420883,0.784349769176855,0,2.21658420675039,0,0.51028111582954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| |||
|short_description=p@chr10:17277365..17277388,- | |||
}} |
Revision as of 01:59, 11 January 2014
Short description: | p@chr10:17277365..17277388, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17277365..17277388, - |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.30e-20 | 76 |
multi fate stem cell | 3.04e-11 | 427 |
somatic stem cell | 7.56e-11 | 433 |
stem cell | 6.24e-10 | 441 |
skin fibroblast | 1.78e-09 | 23 |
mesenchymal stem cell of adipose | 1.06e-07 | 8 |
muscle cell | 1.49e-07 | 55 |
mesodermal cell | 2.18e-07 | 121 |
muscle precursor cell | 2.76e-07 | 58 |
myoblast | 2.76e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.76e-07 | 58 |
electrically responsive cell | 3.83e-07 | 61 |
electrically active cell | 3.83e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
integument | 8.28e-11 | 46 |
integumental system | 8.28e-11 | 46 |
adipose tissue | 1.81e-10 | 14 |
dense mesenchyme tissue | 3.40e-10 | 73 |
somite | 6.82e-10 | 71 |
presomitic mesoderm | 6.82e-10 | 71 |
presumptive segmental plate | 6.82e-10 | 71 |
dermomyotome | 6.82e-10 | 71 |
trunk paraxial mesoderm | 6.82e-10 | 71 |
paraxial mesoderm | 1.38e-09 | 72 |
presumptive paraxial mesoderm | 1.38e-09 | 72 |
vasculature | 1.57e-09 | 78 |
vascular system | 1.57e-09 | 78 |
epithelial vesicle | 3.59e-09 | 78 |
cardiovascular system | 4.35e-09 | 109 |
multilaminar epithelium | 9.35e-09 | 83 |
circulatory system | 1.88e-08 | 112 |
skin of body | 3.92e-08 | 41 |
splanchnic layer of lateral plate mesoderm | 3.52e-07 | 83 |
articulation | 6.03e-07 | 8 |
skeletal joint | 6.03e-07 | 8 |
articular system | 6.03e-07 | 8 |
skeletal muscle tissue | 9.87e-07 | 62 |
striated muscle tissue | 9.87e-07 | 62 |
myotome | 9.87e-07 | 62 |