FFCP PHASE1:Hg19::chrX:100662833..100662842,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2717 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4296 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000480513,ENST00000486121_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_GLA_5end | |||
|id=chrX:100662833..100662842,- | |||
|ontology_enrichment_celltype=CL:0000766!4.05e-35!76;CL:0000839!1.02e-30!70;CL:0000557!1.48e-30!71;CL:0002009!1.00e-29!65;CL:0000763!3.43e-29!112;CL:0000049!3.43e-29!112;CL:0002194!1.09e-28!63;CL:0000576!1.09e-28!63;CL:0000040!1.09e-28!63;CL:0000559!1.09e-28!63;CL:0000860!8.39e-25!45;CL:0000012!6.85e-24!682;CL:0000548!1.97e-23!679;CL:0000004!1.97e-23!679;CL:0000255!1.97e-23!679;CL:0002057!2.32e-23!42;CL:0000003!8.88e-20!722;CL:0000063!1.62e-17!578;CL:0000738!6.64e-13!140;CL:0000144!1.62e-12!625;CL:0002032!2.08e-12!165;CL:0000837!2.08e-12!165;CL:0000037!9.34e-12!172;CL:0000566!9.34e-12!172;CL:0000988!5.87e-11!182;CL:0002031!6.93e-11!124;CL:0002371!1.02e-10!591;CL:0000034!5.20e-09!444;CL:0002087!8.05e-09!119;CL:0000723!8.48e-09!436;CL:0000048!8.64e-09!430;CL:0000134!2.90e-08!358;CL:0000219!4.94e-08!390;CL:0002320!5.59e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.06e-32;33!CL:0002057;4.06e-32;33!CL:0000473;1.02e-30;39!CL:0000234;1.02e-30;39!CL:0000576;1.25e-22;48!CL:0000766;2.99e-20;69!CL:0000763;3.00e-11;100!CL:0000094;5.47e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.89e-50,72;CL:0000557,5.55e-44,67;CL:0002009,5.66e-43,61;CL:0000839,1.37e-42,66;CL:0002194,2.53e-41,59;CL:0000576,2.53e-41,59;CL:0000040,2.53e-41,59;CL:0000559,2.53e-41,59;CL:0000473,3.46e-38,48;CL:0000234,3.46e-38,48;CL:0000763,3.81e-38,108;CL:0000049,3.81e-38,108;CL:0000860,7.83e-34,42;CL:0002057,7.83e-34,42;CL:0000738,2.50e-20,136;CL:0002032,2.64e-17,161;CL:0000837,2.64e-17,161;CL:0000037,7.59e-17,168;CL:0000988,1.88e-16,177;CL:0002031,4.48e-16,120;CL:0002087,1.24e-13,115;CL:0000134,3.37e-08,354;CL:0000094,3.92e-08,8;CL:0000048,1.19e-07,427;CL:0002320,1.71e-07,361;CL:0000723,1.81e-07,433;CL:0000219,3.04e-07,386;CL:0000034,4.37e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.94e-24;42!CL:0000049;3.07e-12;108!UBERON:0008947;5.79e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.63e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.48e-29!102;UBERON:0003061!7.48e-29!102;UBERON:0002371!5.46e-26!80;UBERON:0002193!3.38e-25!112;UBERON:0001474!1.25e-24!86;UBERON:0004765!1.33e-19!101;UBERON:0001434!1.33e-19!101;UBERON:0003081!8.42e-16!216;UBERON:0000926!3.73e-15!448;UBERON:0004120!3.73e-15!448;UBERON:0006603!3.73e-15!448;UBERON:0002204!9.07e-15!167;UBERON:0002405!2.22e-14!115;UBERON:0002384!1.00e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.01e-09;9!UBERON:0001557;9.01e-09;9!UBERON:0000178;2.22e-08;15!UBERON:0000179;2.22e-08;15!UBERON:0000463;2.22e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.81e-41,98;UBERON:0003061,2.81e-41,98;UBERON:0002371,1.00e-38,76;UBERON:0001474,3.13e-36,82;UBERON:0002193,7.98e-35,108;UBERON:0004765,7.29e-32,90;UBERON:0002405,2.58e-27,93;UBERON:0001434,2.78e-26,100;UBERON:0003081,3.18e-23,203;UBERON:0002204,1.80e-18,167;UBERON:0000926,1.79e-15,315;UBERON:0004120,1.79e-15,315;UBERON:0006603,1.79e-15,315;UBERON:0001737,4.44e-09,9;UBERON:0000178,1.80e-08,15;UBERON:0000179,1.80e-08,15;UBERON:0000463,1.80e-08,15;UBERON:0002384,7.37e-07,371 | |||
|phase1_expression=1.2717486548939,0.856402095563933,0.563817616383885,0,0,0,0,0.631719873426831,0.261185628199839,0.737201809504527,0,0,0.527533956456907,0.37129905888014,0.331397375727916,0.672325146451775,0,1.46062018077475,1.46379839637152,0.246242116153576,0.408001382488506,0,0.286235987131057,0.136874425072884,0,0.305653622991805,0.57470412614962,0.236132343941038,2.75354993794233,2.30297638858328,1.23852898652861,0.919421224478927,0.6024118375565,1.47901604066715,0.387336002901508,0,0.293600439334847,0.553995408531877,1.20326668482085,0.434021741431704,1.79132379391939,2.59114932815184,1.54545340580512,3.63495596948912,7.935394817465,2.66842467306598,12.7835970298127,28.7817521615278,32.2094625730908,30.4953935861479,24.8475885333228,26.7224919774101,34.8193137543985,40.0200503821972,32.502356782642,8.47090527941721,15.0098382531815,14.8317499733756,36.4239831921374,56.8044377924686,59.4583526993108,7.25672860410775,16.9544108978387,8.52449501065388,30.7621792946299,49.9298997728203,33.632401445761,23.1148772036204,19.2948679815475,23.0220175387424,20.5835830895345,46.0347044984456,28.1651524822387,1.47878700418359,1.70083439972035,1.25795187305026,2.92054440980887,1.80212271409808,3.85741408072992,1.14005097496499,1.39241674039363,0.91332076882317,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,1.68152568894461,0.790152254325231,0.786839080455332,0,0.205601498999509,0.334372990781356,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0,0.868946423296794,0,0,0.255725123687061,1.0843174571537,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.0654895377488563,1.45718115317017,0,2.92092654289215,2.61194605948901,3.72282289452822,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0.258416759169329,0,0,0.805658634218294,0.760272105718513,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0.366403487860815,18.4492584410489,15.511210565933,0.872188104285069,0,0.759783069987479,1.32409180813219,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,0,0.622422070799533,0.404132016209064,0.490385709340376,0.454072282934794,0,0.234321431833797,0.936480230490962,1.71141546463335,0.597794722207204,0.352303495931295,0.323745888736263,0.421352420106746,0.408308342509787,0.61417158655884,0.413303124703062,0,0.494533858557114,0.910161361938026,0,0.673344455816265,0.500474079487857,0.277064115484183,0,0.30648779579902,0.150238058906597,1.24775401476023,0.538168907066586,0,0.423863802319124,0,0.309157587715317,0,0.37223371266318,0.675105328965065,1.26668106709558,0.504867548488229,0.276149695926898,0,0.355009592516614,0.302256294682921,0.847802961552438,1.35282597214308,0.818238361772504,0.573609190778008,0.609868530647977,0.530119073285941,0.232387885739037,0.518305275076852,0.504641701751257,0.72995471815166,0,0.643240938192885,1.38134921352481,1.85747171212792,2.16563844500876,2.9576700009961,2.36018566109342,4.33819853790268,3.86028904563379,5.22910665821775,2.13543557199987,3.23595139584395,3.92442930250692,1.92373578473195,0,0,0,0,0,0,0,0,0.614942192715568,0.686271241194102,0.658501712451753,2.24803506515239,0.603173834469785,0.555530670951178,0,2.07986957055916,0,0.115930404975077,0.117408694235822,0.577465791044295,0.925971025153221,0.570762456703795,0,0.858486162094873,3.20082107913617,3.04205544681009,2.22946743433092,0,1.17587489739202,0.567100388969546,0.447792613514241,0.581267877027924,0,3.4486426652716,0.792435906119034,2.28060927094849,1.44119953416961,2.14612136824846,0.888970520090367,1.14596527667483,1.17217447210047,0,0.925447434329912,1.50171528921959,0.857479297891735,0,0,0.2933531432838,0.517086863031111,0,0.845302752556,1.06375246633948,0,0.514414748524284,0,0,0.714889968290738,1.08524321078289,0,1.30294473717494,0.355391948742546,2.37585561880029,1.80863626235752,0,0.499864955910285,1.2162378064119,2.00902836572851,2.10833939483032,0.718874566474748,0,0,1.59259437334337,0.61642896765115,0.895304816199478,0.448340575974109,0.788123040807709,0,1.28343036279748,0,0,0,0.167516265334349,0,2.99602809578873,2.99161459204025,5.38740167466846,0.49076596687656,0.500170521059677,0.271265023699736,0,0.535286966391485,0.157702415033935,0.234282829985426,0.601892199455438,0,0,0,0.553107505625109,0.695068915744663,0.391602314925481,0,1.24060815673732,2.15714200818617,0.533637789017222,1.5156378572313,0,0.30239029332968,0.496215615637554,0.153461973288062,0,0.512556597022804,1.02341449813341,0.64341568457443,0,0.925258162815933,0.887808626565635,0.657017248110473,0.519254429183621,0.464841513839837,0.120859449591622,1.40354529212299,0.368323955743585,1.49258782613989,1.0925470080403,0.786746489756545,0.451199612907412,1.84836809050595,0.784349769176855,0,1.26661954671451,0,0.170093705276516,0.431831832204279,0,0,0,0.254876273045038,0.831076008928724,0.447749509444357,0.657779629937804,1.045741804099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| |||
|short_description=p4@GLA | |||
}} |
Revision as of 10:07, 14 September 2013
Short description: | p4@GLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GLA_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -12bp_to_ENST00000480513, ENST00000486121_5end |
EntrezGene: | GLA |
HGNC: | 4296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.89e-50 | 72 |
granulocyte monocyte progenitor cell | 5.55e-44 | 67 |
macrophage dendritic cell progenitor | 5.66e-43 | 61 |
myeloid lineage restricted progenitor cell | 1.37e-42 | 66 |
monopoietic cell | 2.53e-41 | 59 |
monocyte | 2.53e-41 | 59 |
monoblast | 2.53e-41 | 59 |
promonocyte | 2.53e-41 | 59 |
defensive cell | 3.46e-38 | 48 |
phagocyte | 3.46e-38 | 48 |
myeloid cell | 3.81e-38 | 108 |
common myeloid progenitor | 3.81e-38 | 108 |
classical monocyte | 7.83e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.83e-34 | 42 |
leukocyte | 2.50e-20 | 136 |
hematopoietic oligopotent progenitor cell | 2.64e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.64e-17 | 161 |
hematopoietic stem cell | 7.59e-17 | 168 |
hematopoietic cell | 1.88e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 4.48e-16 | 120 |
nongranular leukocyte | 1.24e-13 | 115 |
mesenchymal cell | 3.37e-08 | 354 |
granulocyte | 3.92e-08 | 8 |
multi fate stem cell | 1.19e-07 | 427 |
connective tissue cell | 1.71e-07 | 361 |
somatic stem cell | 1.81e-07 | 433 |
motile cell | 3.04e-07 | 386 |
stem cell | 4.37e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.81e-41 | 98 |
blood island | 2.81e-41 | 98 |
bone marrow | 1.00e-38 | 76 |
bone element | 3.13e-36 | 82 |
hemolymphoid system | 7.98e-35 | 108 |
skeletal element | 7.29e-32 | 90 |
immune system | 2.58e-27 | 93 |
skeletal system | 2.78e-26 | 100 |
lateral plate mesoderm | 3.18e-23 | 203 |
musculoskeletal system | 1.80e-18 | 167 |
mesoderm | 1.79e-15 | 315 |
mesoderm-derived structure | 1.79e-15 | 315 |
presumptive mesoderm | 1.79e-15 | 315 |
larynx | 4.44e-09 | 9 |
blood | 1.80e-08 | 15 |
haemolymphatic fluid | 1.80e-08 | 15 |
organism substance | 1.80e-08 | 15 |
connective tissue | 7.37e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.