FFCP PHASE1:Hg19::chr9:131446083..131446092,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6418|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10760|TSSclassifier=W|UniProt=Q01105,Q5VXV3|association_with_transcript=149bp_to_ENST00000372692,NM_001122821,uc004bvt.3_5end|coexpression_cluster_id=C49|description=CAGE_peak_14_at_SET_5end|id=chr9:131446083..131446092,+|ontology_enrichment_celltype=CL:0000066!2.62e-15!254;CL:0002322!9.89e-08!5;CL:0000221!8.60e-07!71|ontology_enrichment_celltype_v019=CL:0002322;2.63e-43;5!CL:0000540;1.20e-20;6!CL:0000404;1.20e-20;6!CL:0002321;1.07e-14;15!CL:0000148;1.20e-12;10!CL:0000147;3.39e-09;14!CL:0002319;3.79e-08;25!CL:0000047;7.27e-08;2!CL:0000317;7.27e-08;2!CL:1000448;7.27e-08;2!CL:0002308;7.27e-08;2!CL:0002140;7.27e-08;2|ontology_enrichment_celltype_v019_2=CL:0002322,2.12e-43,5;CL:0000047,9.50e-27,8;CL:0000540,1.42e-20,6;CL:0000031,1.42e-20,6;CL:0000404,1.42e-20,6;CL:0000148,1.00e-12,10;CL:0000541,1.00e-12,10;CL:0000221,9.72e-11,72;CL:0000133,3.55e-10,59;CL:0000147,2.99e-09,14;CL:0002319,3.93e-08,25;CL:0000317,8.04e-08,2;CL:1000448,8.04e-08,2;CL:0002308,8.04e-08,2;CL:0002140,8.04e-08,2|ontology_enrichment_development_v019=CL:0000031;1.20e-20;6!CL:0000133;3.79e-07;59|ontology_enrichment_disease=DOID:305!5.54e-13!106;DOID:0050687!4.41e-12!143;DOID:14566!1.35e-09!239;DOID:162!2.15e-09!235;DOID:1749!6.72e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002419;7.27e-08;2!UBERON:0007771;7.27e-08;2!UBERON:0003297;7.27e-08;2!UBERON:0001821;7.27e-08;2!UBERON:0003487;7.27e-08;2!UBERON:0001820;7.27e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002419,8.04e-08,2;UBERON:0007771,8.04e-08,2;UBERON:0003297,8.04e-08,2;UBERON:0001821,8.04e-08,2;UBERON:0003487,8.04e-08,2;UBERON:0001820,8.04e-08,2;UBERON:0005089,8.04e-08,2;UBERON:0005088,8.04e-08,2|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.818238361772504,0,2.5614478287215,2.38553582978673,2.78865462886844,0.725627385107593,2.77552935963191,2.91981887260664,0,0,0,0,0.721879481669586,0.118306800039844,0.505754070234305,0,0,0.435758888184812,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0,0.283550194484773,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0.082509499920588,1.14853107599234,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0.123084805461069,0,0.179736702294654,0.716084698702437,0,0,0,0,0,0,0,0.260427761085233,0,0,0.796554137998498,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0.063186579628488,0,0.207376382794494,0,0.330991955875499,0.313932918407225,0,0,0,0.173559738335131,0.391969589657511,0.0870592065804026,0,0,0.0967563312890851,0.146178634172371,0.164230914106418,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0.229073192331831,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10760 | |||
|TSSclassifier=W | |||
|UniProt=Q01105,Q5VXV3 | |||
|association_with_transcript=149bp_to_ENST00000372692,NM_001122821,uc004bvt.3_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_14_at_SET_5end | |||
|id=chr9:131446083..131446092,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.62e-15!254;CL:0002322!9.89e-08!5;CL:0000221!8.60e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.63e-43;5!CL:0000540;1.20e-20;6!CL:0000404;1.20e-20;6!CL:0002321;1.07e-14;15!CL:0000148;1.20e-12;10!CL:0000147;3.39e-09;14!CL:0002319;3.79e-08;25!CL:0000047;7.27e-08;2!CL:0000317;7.27e-08;2!CL:1000448;7.27e-08;2!CL:0002308;7.27e-08;2!CL:0002140;7.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.12e-43,5;CL:0000047,9.50e-27,8;CL:0000540,1.42e-20,6;CL:0000031,1.42e-20,6;CL:0000404,1.42e-20,6;CL:0000148,1.00e-12,10;CL:0000541,1.00e-12,10;CL:0000221,9.72e-11,72;CL:0000133,3.55e-10,59;CL:0000147,2.99e-09,14;CL:0002319,3.93e-08,25;CL:0000317,8.04e-08,2;CL:1000448,8.04e-08,2;CL:0002308,8.04e-08,2;CL:0002140,8.04e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000031;1.20e-20;6!CL:0000133;3.79e-07;59 | |||
|ontology_enrichment_disease=DOID:305!5.54e-13!106;DOID:0050687!4.41e-12!143;DOID:14566!1.35e-09!239;DOID:162!2.15e-09!235;DOID:1749!6.72e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;7.27e-08;2!UBERON:0007771;7.27e-08;2!UBERON:0003297;7.27e-08;2!UBERON:0001821;7.27e-08;2!UBERON:0003487;7.27e-08;2!UBERON:0001820;7.27e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,8.04e-08,2;UBERON:0007771,8.04e-08,2;UBERON:0003297,8.04e-08,2;UBERON:0001821,8.04e-08,2;UBERON:0003487,8.04e-08,2;UBERON:0001820,8.04e-08,2;UBERON:0005089,8.04e-08,2;UBERON:0005088,8.04e-08,2 | |||
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| |||
|short_description=p14@SET | |||
}} |
Revision as of 07:42, 14 September 2013
Short description: | p14@SET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_SET_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 149bp_to_ENST00000372692, NM_001122821, uc004bvt.3_5end |
EntrezGene: | SET |
HGNC: | 10760 |
UniProt: | Q01105Q5VXV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.12e-43 | 5 |
neuronal stem cell | 9.50e-27 | 8 |
neuron | 1.42e-20 | 6 |
neuroblast | 1.42e-20 | 6 |
electrically signaling cell | 1.42e-20 | 6 |
melanocyte | 1.00e-12 | 10 |
melanoblast | 1.00e-12 | 10 |
ectodermal cell | 9.72e-11 | 72 |
neurectodermal cell | 3.55e-10 | 59 |
pigment cell | 2.99e-09 | 14 |
neural cell | 3.93e-08 | 25 |
sebum secreting cell | 8.04e-08 | 2 |
epithelial cell of sweat gland | 8.04e-08 | 2 |
epithelial cell of skin gland | 8.04e-08 | 2 |
acinar cell of sebaceous gland | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
skin gland | 8.04e-08 | 2 |
epidermis gland | 8.04e-08 | 2 |
gland of integumental system | 8.04e-08 | 2 |
sebaceous gland | 8.04e-08 | 2 |
skin sebaceous gland | 8.04e-08 | 2 |
sweat gland | 8.04e-08 | 2 |
sweat gland placode | 8.04e-08 | 2 |
sebaceous gland placode | 8.04e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.