FFCP PHASE1:Hg19::chr9:130636920..130636950,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=203|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=361|TSSclassifier=S|UniProt=Q53EY8|association_with_transcript=0bp_to_AK223501_5end|coexpression_cluster_id=C243|description=CAGE_peak_5_at_AK1_5end|id=chr9:130636920..130636950,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000153;4.22e-19;9!CL:0000447;4.22e-19;9!CL:0000138;3.07e-15;6!CL:0000327;5.43e-11;15!CL:0000135;8.19e-11;3!CL:0000388;8.19e-11;3!CL:0000499;1.02e-10;28!CL:0002327;8.93e-09;4|ontology_enrichment_celltype_v019_2=CL:0000153,4.93e-19,9;CL:0000447,4.93e-19,9;CL:0000058,3.83e-15,6;CL:0000138,3.83e-15,6;CL:0000327,5.93e-11,15;CL:0000135,6.19e-11,3;CL:0000388,6.19e-11,3;CL:0000499,9.94e-11,28;CL:0002327,9.31e-09,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;5.98e-10;3!DOID:127;5.98e-10;3!DOID:0060072;1.43e-07;4!DOID:114;3.51e-07;2|ontology_enrichment_disease_v019_2=DOID:0060084,5.73e-10,3;DOID:127,5.73e-10,3;DOID:0060072,1.39e-07,4;DOID:114,2.99e-07,2|ontology_enrichment_uberon=UBERON:0007023!1.75e-07!115|ontology_enrichment_uberon_v019=UBERON:0007846;8.19e-11;3!UBERON:0000043;8.19e-11;3!UBERON:0007845;8.19e-11;3!UBERON:0001911;8.93e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.19e-11,3;UBERON:0000043,6.19e-11,3;UBERON:0007845,6.19e-11,3;UBERON:0001911,9.31e-09,4;UBERON:0005333,9.31e-09,4;UBERON:0008425,9.31e-09,4;UBERON:0005311,9.31e-09,4|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,0,0,0.495065411840187,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,6.50590474292219,3.00802746381534,4.05570253090306,18.2915767821753,30.6579968290661,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,1.41867352879343,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0.423863802319124,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0.337169380156203,0,0.220587945464788,0.217879444092406,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0.219500570817251,2.24803506515239,0.603173834469785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0,8.41850113406774,4.65014301622339,3.06706143332169,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,3.61727252471503,0.871533458600294,2.89921674427965,0,0,0,0,0,0,0,1.64381058040307,0.179060963239896,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0.248107807818777,0,0,0.384417447767103,0,0,1.48418066444991,0.154209693802656,0,0,0,0.232420756919918,0,0.40101294060657,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0.657779629937804,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0,0.145016693914229,0.170453254832202,0.356128142586949,0.165284915360978,0,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,6.96655196482292,3.29294892959902,0,0,0,0,2.17781969722645,0.0941438007767792,0,0,0.886860307073351,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,1.19548792950642,0,0,0,0,0,0,2.86433879480975,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,3.0510438035132,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0.230850775511391,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.973033209536731,0,0,0,0,0.606610196826093,0,0.468528891450678,0,0.19566461893209,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0.330991955875499,0.941798755221676,2.38944859545918,0,0,0,1.37189356380129,0,4.89234671077684,0,0.19351266257817,0.0730893170861856,0.164230914106418,0.581934098930517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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=203 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=361 | |||
|TSSclassifier=S | |||
|UniProt=Q53EY8 | |||
|association_with_transcript=0bp_to_AK223501_5end | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_5_at_AK1_5end | |||
|id=chr9:130636920..130636950,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000153;4.22e-19;9!CL:0000447;4.22e-19;9!CL:0000138;3.07e-15;6!CL:0000327;5.43e-11;15!CL:0000135;8.19e-11;3!CL:0000388;8.19e-11;3!CL:0000499;1.02e-10;28!CL:0002327;8.93e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.93e-19,9;CL:0000447,4.93e-19,9;CL:0000058,3.83e-15,6;CL:0000138,3.83e-15,6;CL:0000327,5.93e-11,15;CL:0000135,6.19e-11,3;CL:0000388,6.19e-11,3;CL:0000499,9.94e-11,28;CL:0002327,9.31e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.98e-10;3!DOID:127;5.98e-10;3!DOID:0060072;1.43e-07;4!DOID:114;3.51e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.73e-10,3;DOID:127,5.73e-10,3;DOID:0060072,1.39e-07,4;DOID:114,2.99e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.75e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;8.19e-11;3!UBERON:0000043;8.19e-11;3!UBERON:0007845;8.19e-11;3!UBERON:0001911;8.93e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.19e-11,3;UBERON:0000043,6.19e-11,3;UBERON:0007845,6.19e-11,3;UBERON:0001911,9.31e-09,4;UBERON:0005333,9.31e-09,4;UBERON:0008425,9.31e-09,4;UBERON:0005311,9.31e-09,4 | |||
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| |||
|short_description=p5@AK1 | |||
}} |
Revision as of 07:35, 14 September 2013
Short description: | p5@AK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_AK1_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 0bp_to_AK223501_5end |
EntrezGene: | AK1 |
HGNC: | 361 |
UniProt: | Q53EY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.93e-19 | 9 |
carbohydrate secreting cell | 4.93e-19 | 9 |
chondroblast | 3.83e-15 | 6 |
chondrocyte | 3.83e-15 | 6 |
extracellular matrix secreting cell | 5.93e-11 | 15 |
fibrocyte | 6.19e-11 | 3 |
tendon cell | 6.19e-11 | 3 |
stromal cell | 9.94e-11 | 28 |
mammary gland epithelial cell | 9.31e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 6.19e-11 | 3 |
tendon | 6.19e-11 | 3 |
regular connective tissue | 6.19e-11 | 3 |
mammary gland | 9.31e-09 | 4 |
mammary bud | 9.31e-09 | 4 |
mammary ridge | 9.31e-09 | 4 |
mammary placode | 9.31e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.73e-10 | 3 |
leiomyoma | 5.73e-10 | 3 |
benign neoplasm | 1.39e-07 | 4 |
heart disease | 2.99e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.