FFCP PHASE1:Hg19::chr9:130582222..130582259,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C962|description=CAGE_peak_at_chr9:130582222..130582259,-|id=chr9:130582222..130582259,-|ontology_enrichment_celltype=CL:0000055!1.05e-14!180;CL:0000115!7.70e-14!35;CL:0002139!2.27e-13!24;CL:0000222!3.25e-12!119;CL:0000057!7.55e-12!75;CL:0002078!3.02e-11!44;CL:0000048!1.69e-10!430;CL:0000071!3.33e-10!18;CL:0002546!3.33e-10!18;CL:0000723!1.25e-09!436;CL:0000034!1.10e-08!444;CL:0002334!2.75e-08!12;CL:0002371!4.03e-08!591;CL:0000213!8.11e-08!57;CL:0000215!8.11e-08!57;CL:1000413!6.81e-07!9|ontology_enrichment_celltype_v019=CL:0000115;4.24e-17;36!CL:0002139;1.25e-15;24!CL:0002334;1.29e-12;12!CL:0002078;9.64e-12;45!CL:0000071;2.77e-10;18!CL:1000413;2.65e-09;9!CL:0002138;2.96e-07;6!CL:0000213;5.87e-07;58!CL:0000215;5.87e-07;58|ontology_enrichment_celltype_v019_2=CL:0000115,2.90e-19,36;CL:0002078,2.70e-16,45;CL:0002139,5.66e-16,24;CL:0002334,6.52e-13,12;CL:0000222,2.87e-12,121;CL:0000213,9.94e-12,58;CL:0000215,9.94e-12,58;CL:0000048,1.16e-10,427;CL:0000071,1.68e-10,18;CL:0002546,1.68e-10,18;CL:0000723,4.15e-10,433;CL:0000057,5.87e-10,76;CL:1000413,1.36e-09,9;CL:0000034,2.10e-09,441;CL:0005020,2.19e-07,6;CL:0002138,2.19e-07,6;CL:0005022,2.19e-07,6|ontology_enrichment_development_v019=CL:0002546;2.77e-10;18!CL:0005022;2.96e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!9.15e-17!79;UBERON:0007798!9.15e-17!79;UBERON:0000055!2.35e-16!69;UBERON:0004872!1.84e-15!84;UBERON:0001009!1.22e-13!113;UBERON:0001981!3.61e-13!60;UBERON:0007500!3.61e-13!60;UBERON:0004537!3.61e-13!60;UBERON:0006965!3.61e-13!60;UBERON:0004535!5.91e-13!110;UBERON:0001986!3.33e-10!18;UBERON:0004638!3.33e-10!18;UBERON:0004852!3.33e-10!18;UBERON:0003081!1.33e-09!216;UBERON:0001637!1.81e-09!42;UBERON:0003509!1.81e-09!42;UBERON:0004572!1.81e-09!42;UBERON:0003914!2.87e-09!118;UBERON:0006914!2.71e-08!25;UBERON:0002204!2.96e-08!167;UBERON:0000487!4.56e-08!22;UBERON:0000926!5.05e-08!448;UBERON:0004120!5.05e-08!448;UBERON:0006603!5.05e-08!448;UBERON:0000468!7.76e-08!659;UBERON:0007100!2.14e-07!27;UBERON:0003915!6.81e-07!9;UBERON:0004700!6.81e-07!9;UBERON:0001917!6.81e-07!9|ontology_enrichment_uberon_v019=UBERON:0004638;2.77e-10;18!UBERON:0001986;2.77e-10;18!UBERON:0004852;2.77e-10;18!UBERON:0006914;3.04e-10;25!UBERON:0004457;1.05e-09;9!UBERON:0000042;1.05e-09;9!UBERON:0003688;2.54e-09;6!UBERON:0002358;2.54e-09;6!UBERON:0003684;2.54e-09;6!UBERON:0001178;2.54e-09;6!UBERON:0003915;2.65e-09;9!UBERON:0004700;2.65e-09;9!UBERON:0001917;2.65e-09;9!UBERON:0000487;3.21e-09;22!UBERON:0001473;5.01e-09;8!UBERON:0004536;5.01e-09;8!UBERON:0006558;5.01e-09;8!UBERON:0000055;2.10e-08;65!UBERON:0001637;3.98e-08;42!UBERON:0003509;3.98e-08;42!UBERON:0004572;3.98e-08;42!UBERON:0002465;7.15e-07;10!UBERON:0002049;8.15e-07;75!UBERON:0007798;8.15e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0000055,9.11e-17,68;UBERON:0002049,6.60e-16,78;UBERON:0007798,6.60e-16,78;UBERON:0000926,3.41e-14,315;UBERON:0004120,3.41e-14,315;UBERON:0006603,3.41e-14,315;UBERON:0001009,2.59e-13,112;UBERON:0004535,3.48e-13,109;UBERON:0004872,1.57e-12,83;UBERON:0007500,1.53e-11,59;UBERON:0001981,1.53e-11,59;UBERON:0004537,1.53e-11,59;UBERON:0006965,1.53e-11,59;UBERON:0003081,4.48e-11,203;UBERON:0004638,1.68e-10,18;UBERON:0001986,1.68e-10,18;UBERON:0004852,1.68e-10,18;UBERON:0006914,2.09e-10,25;UBERON:0003915,1.36e-09,9;UBERON:0004700,1.36e-09,9;UBERON:0001917,1.36e-09,9;UBERON:0000487,2.17e-09,22;UBERON:0003688,2.51e-09,6;UBERON:0002358,2.51e-09,6;UBERON:0003684,2.51e-09,6;UBERON:0001178,2.51e-09,6;UBERON:0001637,2.58e-09,42;UBERON:0003509,2.58e-09,42;UBERON:0004572,2.58e-09,42;UBERON:0001473,2.75e-09,8;UBERON:0004536,2.75e-09,8;UBERON:0006558,2.75e-09,8;UBERON:0003914,2.44e-08,117;UBERON:0002465,4.52e-07,10;UBERON:0004573,5.86e-07,33;UBERON:0004571,5.86e-07,33;UBERON:0004457,9.27e-07,12;UBERON:0000042,9.27e-07,12|phase1_expression=3.27021082687002,6.20891519283851,6.3429481843187,4.00293193412522,6.25745532198203,6.97870819280295,0,0.631719873426831,0.522371256399677,0,0,0,0.263766978228454,0.618831764800233,0.662794751455832,2.01697543935533,1.20538905604795,0.730310090387373,0,0.246242116153576,1.02000345622126,0,0,0,0.251085279189606,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0,0,0,0.739508020333575,0,0,0,0,0.200544447470142,0.434021741431704,1.56740831967947,0.32389366601898,0.257575567634187,3.19876125315042,2.26725566213286,2.18325655069035,0.697287110717054,3.28934310417461,1.54853185447552,1.7261543539329,1.0246428261164,0,0,0,0,1.88242339542605,5.73102915121476,1.12361742222542,2.44867113896722,0.962787081228281,2.55734850319616,1.64925650093358,2.59302754908121,1.27867425159808,0.580418477257168,0,0.622822248995575,0.251248665256743,1.0429658368404,0.868755378820466,0.6053995026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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C962 | |||
|description=CAGE_peak_at_chr9:130582222..130582259,- | |||
|id=chr9:130582222..130582259,- | |||
|ontology_enrichment_celltype=CL:0000055!1.05e-14!180;CL:0000115!7.70e-14!35;CL:0002139!2.27e-13!24;CL:0000222!3.25e-12!119;CL:0000057!7.55e-12!75;CL:0002078!3.02e-11!44;CL:0000048!1.69e-10!430;CL:0000071!3.33e-10!18;CL:0002546!3.33e-10!18;CL:0000723!1.25e-09!436;CL:0000034!1.10e-08!444;CL:0002334!2.75e-08!12;CL:0002371!4.03e-08!591;CL:0000213!8.11e-08!57;CL:0000215!8.11e-08!57;CL:1000413!6.81e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.24e-17;36!CL:0002139;1.25e-15;24!CL:0002334;1.29e-12;12!CL:0002078;9.64e-12;45!CL:0000071;2.77e-10;18!CL:1000413;2.65e-09;9!CL:0002138;2.96e-07;6!CL:0000213;5.87e-07;58!CL:0000215;5.87e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.90e-19,36;CL:0002078,2.70e-16,45;CL:0002139,5.66e-16,24;CL:0002334,6.52e-13,12;CL:0000222,2.87e-12,121;CL:0000213,9.94e-12,58;CL:0000215,9.94e-12,58;CL:0000048,1.16e-10,427;CL:0000071,1.68e-10,18;CL:0002546,1.68e-10,18;CL:0000723,4.15e-10,433;CL:0000057,5.87e-10,76;CL:1000413,1.36e-09,9;CL:0000034,2.10e-09,441;CL:0005020,2.19e-07,6;CL:0002138,2.19e-07,6;CL:0005022,2.19e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.77e-10;18!CL:0005022;2.96e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.15e-17!79;UBERON:0007798!9.15e-17!79;UBERON:0000055!2.35e-16!69;UBERON:0004872!1.84e-15!84;UBERON:0001009!1.22e-13!113;UBERON:0001981!3.61e-13!60;UBERON:0007500!3.61e-13!60;UBERON:0004537!3.61e-13!60;UBERON:0006965!3.61e-13!60;UBERON:0004535!5.91e-13!110;UBERON:0001986!3.33e-10!18;UBERON:0004638!3.33e-10!18;UBERON:0004852!3.33e-10!18;UBERON:0003081!1.33e-09!216;UBERON:0001637!1.81e-09!42;UBERON:0003509!1.81e-09!42;UBERON:0004572!1.81e-09!42;UBERON:0003914!2.87e-09!118;UBERON:0006914!2.71e-08!25;UBERON:0002204!2.96e-08!167;UBERON:0000487!4.56e-08!22;UBERON:0000926!5.05e-08!448;UBERON:0004120!5.05e-08!448;UBERON:0006603!5.05e-08!448;UBERON:0000468!7.76e-08!659;UBERON:0007100!2.14e-07!27;UBERON:0003915!6.81e-07!9;UBERON:0004700!6.81e-07!9;UBERON:0001917!6.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.77e-10;18!UBERON:0001986;2.77e-10;18!UBERON:0004852;2.77e-10;18!UBERON:0006914;3.04e-10;25!UBERON:0004457;1.05e-09;9!UBERON:0000042;1.05e-09;9!UBERON:0003688;2.54e-09;6!UBERON:0002358;2.54e-09;6!UBERON:0003684;2.54e-09;6!UBERON:0001178;2.54e-09;6!UBERON:0003915;2.65e-09;9!UBERON:0004700;2.65e-09;9!UBERON:0001917;2.65e-09;9!UBERON:0000487;3.21e-09;22!UBERON:0001473;5.01e-09;8!UBERON:0004536;5.01e-09;8!UBERON:0006558;5.01e-09;8!UBERON:0000055;2.10e-08;65!UBERON:0001637;3.98e-08;42!UBERON:0003509;3.98e-08;42!UBERON:0004572;3.98e-08;42!UBERON:0002465;7.15e-07;10!UBERON:0002049;8.15e-07;75!UBERON:0007798;8.15e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,9.11e-17,68;UBERON:0002049,6.60e-16,78;UBERON:0007798,6.60e-16,78;UBERON:0000926,3.41e-14,315;UBERON:0004120,3.41e-14,315;UBERON:0006603,3.41e-14,315;UBERON:0001009,2.59e-13,112;UBERON:0004535,3.48e-13,109;UBERON:0004872,1.57e-12,83;UBERON:0007500,1.53e-11,59;UBERON:0001981,1.53e-11,59;UBERON:0004537,1.53e-11,59;UBERON:0006965,1.53e-11,59;UBERON:0003081,4.48e-11,203;UBERON:0004638,1.68e-10,18;UBERON:0001986,1.68e-10,18;UBERON:0004852,1.68e-10,18;UBERON:0006914,2.09e-10,25;UBERON:0003915,1.36e-09,9;UBERON:0004700,1.36e-09,9;UBERON:0001917,1.36e-09,9;UBERON:0000487,2.17e-09,22;UBERON:0003688,2.51e-09,6;UBERON:0002358,2.51e-09,6;UBERON:0003684,2.51e-09,6;UBERON:0001178,2.51e-09,6;UBERON:0001637,2.58e-09,42;UBERON:0003509,2.58e-09,42;UBERON:0004572,2.58e-09,42;UBERON:0001473,2.75e-09,8;UBERON:0004536,2.75e-09,8;UBERON:0006558,2.75e-09,8;UBERON:0003914,2.44e-08,117;UBERON:0002465,4.52e-07,10;UBERON:0004573,5.86e-07,33;UBERON:0004571,5.86e-07,33;UBERON:0004457,9.27e-07,12;UBERON:0000042,9.27e-07,12 | |||
|phase1_expression=3.27021082687002,6.20891519283851,6.3429481843187,4.00293193412522,6.25745532198203,6.97870819280295,0,0.631719873426831,0.522371256399677,0,0,0,0.263766978228454,0.618831764800233,0.662794751455832,2.01697543935533,1.20538905604795,0.730310090387373,0,0.246242116153576,1.02000345622126,0,0,0,0.251085279189606,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0,0,0,0.739508020333575,0,0,0,0,0.200544447470142,0.434021741431704,1.56740831967947,0.32389366601898,0.257575567634187,3.19876125315042,2.26725566213286,2.18325655069035,0.697287110717054,3.28934310417461,1.54853185447552,1.7261543539329,1.0246428261164,0,0,0,0,1.88242339542605,5.73102915121476,1.12361742222542,2.44867113896722,0.962787081228281,2.55734850319616,1.64925650093358,2.59302754908121,1.27867425159808,0.580418477257168,0,0.622822248995575,0.251248665256743,1.0429658368404,0.868755378820466,0.605399502633369,0.368277635987565,0.949387162322653,0.211255286311942,0,0.419317291016752,0.22465726229299,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,2.68280343881454,0.639312809217652,1.80719576192283,2.00535164254356,2.89693037921647,1.5905718941022,2.43317435151318,0.0945348171640679,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0.174129737299267,1.32957960518865,0,0,0,1.98762407366705,0.860234595106124,1.38856200643038,3.39184765154406,8.38998872419812,10.7296036356626,5.01587919688345,2.32575083252396,1.77883131343355,2.67776490211736,1.20848795132744,0.760272105718513,3.66093086322254,2.94130464276695,8.91156142669936,0.714397826272638,0.898117490504679,0.563057402416611,1.53316637465883,4.74632829784064,3.48083313467774,0,0,0,2.48485975847659,2.27934920996244,0.662045904066094,0.573673241497627,1.41867352879343,0.560677600142307,0,2.71334303258876,0.311211035399766,1.61652806483626,1.9615428373615,1.21085942115945,1.72852777344,0,1.87296046098192,0,1.34503812496621,0.704606991862589,0.323745888736263,0,0.408308342509787,0.245668634623536,1.03325781175765,1.18800285728205,0.989067717114227,1.82032272387605,2.15585442544872,0,0.500474079487857,0,0,1.22595118319608,0.300476117813194,0.567160915800105,2.33206526395521,0.427114777637135,0,1.50045548042201,0.515262646192195,1.03056216018252,0.558350568994769,0.675105328965065,0.0974370051611986,0.504867548488229,0.736399189138395,0.484938170456436,2.13005755509969,0.503760491138201,1.18692414617341,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,5.14592750554308,5.52539685409922,0.928735856063958,0,0.354920400119532,0.674338760312407,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,1.15424147083917,5.90524363699719,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0.514703430895577,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0,1.44366447761074,2.31492756288305,2.09279567458058,0,0,0.738651018262192,0.468008530278475,1.33768046059855,0.93733833986777,0,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,1.71072446022705,0.719792448923265,0.600686115687835,1.14330573052231,0.560655421726804,0.87192013766656,0.5867062865676,0.129271715757778,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,2.39779961114489,1.00084595560703,0.542621605391443,1.64648067356154,0.65147236858747,0.355391948742546,0,0,0,0.399891964728228,0,1.00451418286425,4.21667878966063,1.19812427745791,0,1.42636905040718,1.30303176000821,3.28762116080613,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,2.50085260529839,0.271265023699736,1.45579603071565,3.7470087647404,1.73472656537328,0.585707074963566,0,0,2.0694614258501,1.32845119707087,0.368738337083406,1.21637060255316,0.587403472388222,0.343143423810856,0,0,0,0,0,0,2.72918588600655,1.99500565274481,8.70046292742528,7.56020980608636,2.55853624533352,4.3430558708774,4.45254199334973,2.00472601943452,2.84098760501003,0.328508624055237,3.11552657510173,2.5566283261191,0,0.200506470303285,0,0.574072240823034,0.910455840033585,0.917870904715969,0,0.0770153371044148,0,0,0,11.3733384070897,4.93271745301895,3.88648648983851,23.1340879035434,0,0,0,0,0.447749509444357,0,0.261435451024901,0,0.328014645699706,0,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,3.21367859688319,0.580024309752732,0.462145851343933,0.460511024178389,0.275673144969061,0.107420244868274,1.59518363305651,1.27839941124151,0.356128142586949,0,0,0,0,0.929691098594572,2.51849877464512,0,0.308033580176089,0,0,1.11194531462352,0,0,0.316379424718726,0.38126038784765,0.511795582622668,0.855877976067841,0.636406495851874,0,0.359744915166629,2.19629623788844,0.942499218765491,0.404364963146632,3.17020642346017,0.421258456238981,0,5.84912375115083,0,0.272999822815972,1.41405431953713,6.78048699721457,1.65409603063837,3.98063385144732,1.75380354101505,1.15755106853338,0,0.405820753925408,1.239293992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| |||
|short_description=p@chr9:130582222..130582259,- | |||
}} |
Revision as of 07:34, 14 September 2013
Short description: | p@chr9:130582222..130582259, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:130582222..130582259, - |
Coexpression cluster: | C962_Renal_Endothelial_Preadipocyte_Adipocyte_Hepatic_chorionic_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.90e-19 | 36 |
meso-epithelial cell | 2.70e-16 | 45 |
endothelial cell of vascular tree | 5.66e-16 | 24 |
preadipocyte | 6.52e-13 | 12 |
mesodermal cell | 2.87e-12 | 121 |
lining cell | 9.94e-12 | 58 |
barrier cell | 9.94e-12 | 58 |
multi fate stem cell | 1.16e-10 | 427 |
blood vessel endothelial cell | 1.68e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.68e-10 | 18 |
somatic stem cell | 4.15e-10 | 433 |
fibroblast | 5.87e-10 | 76 |
endothelial cell of artery | 1.36e-09 | 9 |
stem cell | 2.10e-09 | 441 |
lymphangioblast | 2.19e-07 | 6 |
endothelial cell of lymphatic vessel | 2.19e-07 | 6 |
vascular lymphangioblast | 2.19e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.