FFCP PHASE1:Hg19::chr8:126104171..126104180,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=286053|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26513|TSSclassifier=S|UniProt=E5RG00|association_with_transcript=50bp_to_ENST00000518146_5end|coexpression_cluster_id=C0|description=CAGE_peak_5_at_NSMCE2_5end|id=chr8:126104171..126104180,+|ontology_enrichment_celltype=CL:0002057!1.57e-37!42;CL:0000860!3.05e-35!45;CL:0000738!7.33e-34!140;CL:0000037!3.12e-32!172;CL:0000566!3.12e-32!172;CL:0000988!3.10e-30!182;CL:0002031!1.35e-29!124;CL:0002032!1.76e-29!165;CL:0000837!1.76e-29!165;CL:0002087!1.12e-28!119;CL:0000766!3.84e-28!76;CL:0002009!1.18e-24!65;CL:0000839!5.91e-24!70;CL:0000763!7.63e-24!112;CL:0000049!7.63e-24!112;CL:0000557!1.23e-23!71;CL:0002194!4.39e-23!63;CL:0000576!4.39e-23!63;CL:0000040!4.39e-23!63;CL:0000559!4.39e-23!63;CL:0000134!4.43e-14!358;CL:0000219!1.20e-13!390;CL:0002320!4.15e-13!365;CL:0000791!1.62e-07!18;CL:0000789!1.62e-07!18;CL:0002420!1.62e-07!18;CL:0002419!1.62e-07!18;CL:0000790!1.62e-07!18;CL:0000048!1.65e-07!430;CL:0000034!1.92e-07!444;CL:0000094!2.98e-07!8;CL:0000624!5.26e-07!6;CL:0000723!5.59e-07!436;CL:0002393!9.84e-07!9;CL:0002397!9.84e-07!9|ontology_enrichment_celltype_v019=CL:0000860;1.91e-72;33!CL:0002057;1.91e-72;33!CL:0000473;7.57e-50;39!CL:0000234;7.57e-50;39!CL:0000576;5.91e-42;48!CL:0000766;8.04e-32;69!CL:0002087;7.33e-19;104!CL:0000094;1.84e-16;8!CL:0000738;1.98e-13;136!CL:0000763;5.89e-12;100!CL:0000623;6.58e-12;3!CL:0000081;8.61e-12;11!CL:0000767;9.89e-12;3!CL:0002393;4.33e-10;6!CL:0002397;4.33e-10;6!CL:0000624;1.81e-09;6!CL:0000791;8.33e-09;18!CL:0000789;8.33e-09;18!CL:0002419;8.33e-09;18!CL:0000771;8.40e-09;2!CL:0000988;1.17e-08;177|ontology_enrichment_celltype_v019_2=CL:0000860,8.65e-80,42;CL:0002057,8.65e-80,42;CL:0000473,8.06e-69,48;CL:0000234,8.06e-69,48;CL:0000738,9.53e-64,136;CL:0000766,1.01e-62,72;CL:0002087,1.06e-55,115;CL:0002194,1.83e-53,59;CL:0000576,1.83e-53,59;CL:0000040,1.83e-53,59;CL:0000559,1.83e-53,59;CL:0002009,1.75e-51,61;CL:0002031,2.10e-50,120;CL:0000037,1.13e-49,168;CL:0002032,7.93e-48,161;CL:0000837,7.93e-48,161;CL:0000839,4.78e-47,66;CL:0000988,1.27e-46,177;CL:0000557,3.07e-46,67;CL:0000763,5.17e-39,108;CL:0000049,5.17e-39,108;CL:0000134,5.32e-18,354;CL:0002320,1.93e-17,361;CL:0000094,1.72e-16,8;CL:0000219,1.80e-15,386;CL:0000048,4.65e-13,427;CL:0000723,1.00e-12,433;CL:0000034,2.70e-12,441;CL:0000623,5.08e-12,3;CL:0000825,5.08e-12,3;CL:0000081,8.22e-12,11;CL:0000767,9.92e-12,3;CL:0000624,1.73e-09,6;CL:0000771,6.43e-09,2;CL:0000838,7.13e-09,52;CL:0000791,8.45e-09,18;CL:0000789,8.45e-09,18;CL:0002420,8.45e-09,18;CL:0002419,8.45e-09,18;CL:0000790,8.45e-09,18;CL:0000542,1.18e-08,53;CL:0000051,1.18e-08,53|ontology_enrichment_development_v019=CL:0002057;7.36e-59;42!CL:0000049;2.81e-12;108!CL:0000790;8.33e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.65e-20!102;UBERON:0003061!1.65e-20!102;UBERON:0002371!4.22e-20!80;UBERON:0001474!4.28e-20!86;UBERON:0002193!2.31e-18!112;UBERON:0004765!4.08e-16!101;UBERON:0001434!4.08e-16!101;UBERON:0002405!1.30e-14!115;UBERON:0002384!4.25e-14!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.60e-40,76;UBERON:0001474,1.89e-36,82;UBERON:0002390,1.25e-33,98;UBERON:0003061,1.25e-33,98;UBERON:0002405,1.59e-33,93;UBERON:0004765,1.49e-32,90;UBERON:0002193,8.70e-30,108;UBERON:0001434,1.50e-28,100;UBERON:0002384,1.12e-16,371;UBERON:0002204,4.26e-14,167;UBERON:0003081,3.66e-12,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,3.93364276848904,1.15148819429164,2.47705797305722,0,0,0,0.154934401160603,0.142169232487422,0.587200878669695,2.21598163412751,3.40925560699241,2.17010870715852,0.223915474239924,0,0,0.581592955118259,4.1566353805769,1.94067248950253,2.09186133215116,4.52284676824008,10.8397229813286,2.01384674625505,3.58624989140741,4.7296445977717,4.13694816883942,9.03678557017357,10.8341189275473,1.50593871634084,7.36846605156184,5.61808711112712,1.53041946185451,7.06043859567406,3.19668562899521,0.659702600373432,1.99463657621632,2.55734850319616,1.16083695451434,1.13477044938228,2.4912889959823,2.76373531782418,5.73631210262222,9.99068685643537,0,2.20966581592539,3.16462387440884,0.211255286311942,1.4882300997553,0,0.44931452458598,0.450530678524519,0.64290234678832,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0,1.28019066769952,0,0,0,0,2.27685187643779,0.587237189370939,1.91136614062614,0,0,0.263384084775077,1.180258620683,1.57204305099666,1.23360899399706,1.00311897234407,0.977766799900771,0.946895611469467,1.94826728407911,0.334231370655521,0.589211814949674,0.664601683750863,1.08321545506006,0,0.130059347559878,0,0,0,0.593146252648242,0,0,0.793165398882963,1.53288197440768,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0,3.42731463482045,1.33720097891754,2.17236605824198,0,0,0,0,0.50133791063589,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=286053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26513 | |||
|TSSclassifier=S | |||
|UniProt=E5RG00 | |||
|association_with_transcript=50bp_to_ENST00000518146_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_NSMCE2_5end | |||
|id=chr8:126104171..126104180,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.57e-37!42;CL:0000860!3.05e-35!45;CL:0000738!7.33e-34!140;CL:0000037!3.12e-32!172;CL:0000566!3.12e-32!172;CL:0000988!3.10e-30!182;CL:0002031!1.35e-29!124;CL:0002032!1.76e-29!165;CL:0000837!1.76e-29!165;CL:0002087!1.12e-28!119;CL:0000766!3.84e-28!76;CL:0002009!1.18e-24!65;CL:0000839!5.91e-24!70;CL:0000763!7.63e-24!112;CL:0000049!7.63e-24!112;CL:0000557!1.23e-23!71;CL:0002194!4.39e-23!63;CL:0000576!4.39e-23!63;CL:0000040!4.39e-23!63;CL:0000559!4.39e-23!63;CL:0000134!4.43e-14!358;CL:0000219!1.20e-13!390;CL:0002320!4.15e-13!365;CL:0000791!1.62e-07!18;CL:0000789!1.62e-07!18;CL:0002420!1.62e-07!18;CL:0002419!1.62e-07!18;CL:0000790!1.62e-07!18;CL:0000048!1.65e-07!430;CL:0000034!1.92e-07!444;CL:0000094!2.98e-07!8;CL:0000624!5.26e-07!6;CL:0000723!5.59e-07!436;CL:0002393!9.84e-07!9;CL:0002397!9.84e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.91e-72;33!CL:0002057;1.91e-72;33!CL:0000473;7.57e-50;39!CL:0000234;7.57e-50;39!CL:0000576;5.91e-42;48!CL:0000766;8.04e-32;69!CL:0002087;7.33e-19;104!CL:0000094;1.84e-16;8!CL:0000738;1.98e-13;136!CL:0000763;5.89e-12;100!CL:0000623;6.58e-12;3!CL:0000081;8.61e-12;11!CL:0000767;9.89e-12;3!CL:0002393;4.33e-10;6!CL:0002397;4.33e-10;6!CL:0000624;1.81e-09;6!CL:0000791;8.33e-09;18!CL:0000789;8.33e-09;18!CL:0002419;8.33e-09;18!CL:0000771;8.40e-09;2!CL:0000988;1.17e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.65e-80,42;CL:0002057,8.65e-80,42;CL:0000473,8.06e-69,48;CL:0000234,8.06e-69,48;CL:0000738,9.53e-64,136;CL:0000766,1.01e-62,72;CL:0002087,1.06e-55,115;CL:0002194,1.83e-53,59;CL:0000576,1.83e-53,59;CL:0000040,1.83e-53,59;CL:0000559,1.83e-53,59;CL:0002009,1.75e-51,61;CL:0002031,2.10e-50,120;CL:0000037,1.13e-49,168;CL:0002032,7.93e-48,161;CL:0000837,7.93e-48,161;CL:0000839,4.78e-47,66;CL:0000988,1.27e-46,177;CL:0000557,3.07e-46,67;CL:0000763,5.17e-39,108;CL:0000049,5.17e-39,108;CL:0000134,5.32e-18,354;CL:0002320,1.93e-17,361;CL:0000094,1.72e-16,8;CL:0000219,1.80e-15,386;CL:0000048,4.65e-13,427;CL:0000723,1.00e-12,433;CL:0000034,2.70e-12,441;CL:0000623,5.08e-12,3;CL:0000825,5.08e-12,3;CL:0000081,8.22e-12,11;CL:0000767,9.92e-12,3;CL:0000624,1.73e-09,6;CL:0000771,6.43e-09,2;CL:0000838,7.13e-09,52;CL:0000791,8.45e-09,18;CL:0000789,8.45e-09,18;CL:0002420,8.45e-09,18;CL:0002419,8.45e-09,18;CL:0000790,8.45e-09,18;CL:0000542,1.18e-08,53;CL:0000051,1.18e-08,53 | |||
|ontology_enrichment_development_v019=CL:0002057;7.36e-59;42!CL:0000049;2.81e-12;108!CL:0000790;8.33e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.65e-20!102;UBERON:0003061!1.65e-20!102;UBERON:0002371!4.22e-20!80;UBERON:0001474!4.28e-20!86;UBERON:0002193!2.31e-18!112;UBERON:0004765!4.08e-16!101;UBERON:0001434!4.08e-16!101;UBERON:0002405!1.30e-14!115;UBERON:0002384!4.25e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.60e-40,76;UBERON:0001474,1.89e-36,82;UBERON:0002390,1.25e-33,98;UBERON:0003061,1.25e-33,98;UBERON:0002405,1.59e-33,93;UBERON:0004765,1.49e-32,90;UBERON:0002193,8.70e-30,108;UBERON:0001434,1.50e-28,100;UBERON:0002384,1.12e-16,371;UBERON:0002204,4.26e-14,167;UBERON:0003081,3.66e-12,203 | |||
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| |||
|short_description=p5@NSMCE2 | |||
}} |
Revision as of 03:28, 14 September 2013
Short description: | p5@NSMCE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_NSMCE2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 50bp_to_ENST00000518146_5end |
EntrezGene: | NSMCE2 |
HGNC: | 26513 |
UniProt: | E5RG00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.60e-40 | 76 |
bone element | 1.89e-36 | 82 |
hematopoietic system | 1.25e-33 | 98 |
blood island | 1.25e-33 | 98 |
immune system | 1.59e-33 | 93 |
skeletal element | 1.49e-32 | 90 |
hemolymphoid system | 8.70e-30 | 108 |
skeletal system | 1.50e-28 | 100 |
connective tissue | 1.12e-16 | 371 |
musculoskeletal system | 4.26e-14 | 167 |
lateral plate mesoderm | 3.66e-12 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.