FFCP PHASE1:Hg19::chr8:117614824..117614829,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2159|description=CAGE_peak_at_chr8:117614824..117614829,+|id=chr8:117614824..117614829,+|ontology_enrichment_celltype=CL:0002322!4.20e-13!5;CL:0000540!4.74e-07!6;CL:0000031!4.74e-07!6;CL:0000404!4.74e-07!6|ontology_enrichment_celltype_v019=CL:0002322;1.82e-18;5!CL:0000540;9.14e-16;6!CL:0000404;9.14e-16;6!CL:0000946;3.63e-11;1!CL:0000786;3.63e-11;1|ontology_enrichment_celltype_v019_2=CL:0002322,2.53e-18,5;CL:0000540,9.62e-16,6;CL:0000031,9.62e-16,6;CL:0000404,9.62e-16,6;CL:0000047,5.94e-12,8;CL:0000946,2.18e-11,1;CL:0000786,2.18e-11,1;CL:0000980,2.18e-11,1|ontology_enrichment_development_v019=CL:0000031;9.14e-16;6|ontology_enrichment_disease=DOID:14566!2.37e-19!239;DOID:162!3.54e-19!235;DOID:0050687!5.59e-13!143;DOID:305!1.27e-11!106;DOID:0050686!4.61e-11!137;DOID:1036!6.47e-11!8;DOID:3095!6.56e-09!22;DOID:2994!6.56e-09!22|ontology_enrichment_disease_v019=DOID:3095;1.37e-07;22!DOID:2994;1.37e-07;22|ontology_enrichment_disease_v019_2=DOID:3095,1.32e-07,22;DOID:2994,1.32e-07,22|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.387336002901508,0.426507697462265,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,1.32529768321485,1.2781333715647,0.621966330092223,2.01856680700503,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0.254253650292766,0,0,1.16641845353302,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0.451191321234361,0.392125068635479,0.335643173951685,2.84630599086278,0.476809736941136,0,0,0.282706142867882,0,0,0,0,1.77912677208373,0,0,0,0,0,0,0,0,0,0,0,0,3.30711522711884,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.19980960958213,0,0.114536596165916,0.343189995723929,0,0.248505071130865,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.508039992394707,0,0,3.21506296930038,1.37539436597234,2.49264202817511,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,1.4776653734881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52183498429854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0.107824811396682,0.314531883711793,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707818340086442,0,0.115525666150338,0,0,0.397832444232549,0,0,0,0.261906694481422,0.655087670040387,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,1.84374380089247,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.397901550322736,0.237840181555137,0,0.879524133963433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,2.64949492153666,6.33740317389434,1.64708051314868,2.03977659483963,0,0,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0,1.23345048838675,0,0,0,0,0,0,0,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p@chr8:117614824..117614829,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2159 | |||
|description=CAGE_peak_at_chr8:117614824..117614829,+ | |||
|id=chr8:117614824..117614829,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.20e-13!5;CL:0000540!4.74e-07!6;CL:0000031!4.74e-07!6;CL:0000404!4.74e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.82e-18;5!CL:0000540;9.14e-16;6!CL:0000404;9.14e-16;6!CL:0000946;3.63e-11;1!CL:0000786;3.63e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.53e-18,5;CL:0000540,9.62e-16,6;CL:0000031,9.62e-16,6;CL:0000404,9.62e-16,6;CL:0000047,5.94e-12,8;CL:0000946,2.18e-11,1;CL:0000786,2.18e-11,1;CL:0000980,2.18e-11,1 | |||
|ontology_enrichment_development_v019=CL:0000031;9.14e-16;6 | |||
|ontology_enrichment_disease=DOID:14566!2.37e-19!239;DOID:162!3.54e-19!235;DOID:0050687!5.59e-13!143;DOID:305!1.27e-11!106;DOID:0050686!4.61e-11!137;DOID:1036!6.47e-11!8;DOID:3095!6.56e-09!22;DOID:2994!6.56e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.37e-07;22!DOID:2994;1.37e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.32e-07,22;DOID:2994,1.32e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.387336002901508,0.426507697462265,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,1.32529768321485,1.2781333715647,0.621966330092223,2.01856680700503,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0.254253650292766,0,0,1.16641845353302,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0.451191321234361,0.392125068635479,0.335643173951685,2.84630599086278,0.476809736941136,0,0,0.282706142867882,0,0,0,0,1.77912677208373,0,0,0,0,0,0,0,0,0,0,0,0,3.30711522711884,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.19980960958213,0,0.114536596165916,0.343189995723929,0,0.248505071130865,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.508039992394707,0,0,3.21506296930038,1.37539436597234,2.49264202817511,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,1.4776653734881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52183498429854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0.107824811396682,0.314531883711793,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707818340086442,0,0.115525666150338,0,0,0.397832444232549,0,0,0,0.261906694481422,0.655087670040387,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,1.84374380089247,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.397901550322736,0.237840181555137,0,0.879524133963433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,2.64949492153666,6.33740317389434,1.64708051314868,2.03977659483963,0,0,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0,1.23345048838675,0,0,0,0,0,0,0,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:117614824..117614829,+ | |||
}} |
Revision as of 03:15, 14 September 2013
Short description: | p@chr8:117614824..117614829, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:117614824..117614829, + |
Coexpression cluster: | C2159_teratocarcinoma_H9_HES3GFP_chronic_embryonic_acantholytic_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.53e-18 | 5 |
neuron | 9.62e-16 | 6 |
neuroblast | 9.62e-16 | 6 |
electrically signaling cell | 9.62e-16 | 6 |
neuronal stem cell | 5.94e-12 | 8 |
antibody secreting cell | 2.18e-11 | 1 |
plasma cell | 2.18e-11 | 1 |
plasmablast | 2.18e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.32e-07 | 22 |
germ cell cancer | 1.32e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.