FFCP PHASE1:Hg19::chr8:57354303..57354312,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C309|description=CAGE_peak_at_chr8:57354303..57354312,-|id=chr8:57354303..57354312,-|ontology_enrichment_celltype=CL:0000153!1.23e-20!9;CL:0000447!1.23e-20!9;CL:0000135!1.15e-16!3;CL:0000386!1.15e-16!3;CL:0000388!1.15e-16!3;CL:0000667!1.67e-14!6;CL:0000058!1.67e-14!6;CL:0000138!1.67e-14!6;CL:0000499!2.57e-14!27;CL:0002556!5.49e-14!6;CL:0000327!4.75e-13!14;CL:0000214!8.06e-08!3|ontology_enrichment_celltype_v019=CL:0000153;8.53e-30;9!CL:0000447;8.53e-30;9!CL:0000138;1.10e-25;6!CL:0000135;4.60e-23;3!CL:0000388;4.60e-23;3!CL:0000499;3.73e-21;28!CL:0000327;4.65e-18;15!CL:0002556;5.08e-12;6!CL:0000151;5.07e-07;36!CL:0000214;9.64e-07;3|ontology_enrichment_celltype_v019_2=CL:0000153,9.90e-30,9;CL:0000447,9.90e-30,9;CL:0000058,1.19e-25,6;CL:0000138,1.19e-25,6;CL:0000135,4.12e-23,3;CL:0000388,4.12e-23,3;CL:0000499,3.87e-21,28;CL:0000327,5.08e-18,15;CL:0002556,5.08e-12,6;CL:0000151,1.09e-07,36|ontology_enrichment_development_v019=UBERON:0003099;2.66e-18;1!UBERON:0003852;2.66e-18;1!UBERON:0006222;1.22e-17;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!7.40e-21!4;UBERON:0002435!7.40e-21!4;UBERON:0000204!7.40e-21!4;UBERON:0010082!7.40e-21!4;UBERON:0000043!1.15e-16!3;UBERON:0005383!2.92e-16!3;UBERON:0005382!2.92e-16!3;UBERON:0001758!5.49e-14!6;UBERON:0003672!5.49e-14!6;UBERON:0002308!6.19e-14!9;UBERON:0000125!6.19e-14!9;UBERON:0009663!5.57e-12!7;UBERON:0003129!1.05e-11!11;UBERON:0001873!2.09e-11!2;UBERON:0010122!2.09e-11!2;UBERON:0000075!7.31e-10!13;UBERON:0005944!7.31e-10!13;UBERON:0004288!7.31e-10!13;UBERON:0003089!7.31e-10!13;UBERON:0002420!2.45e-09!9;UBERON:0007245!2.45e-09!9;UBERON:0010009!2.45e-09!9;UBERON:0010011!2.45e-09!9;UBERON:0000454!2.45e-09!9;UBERON:0001049!2.79e-08!57;UBERON:0005068!2.79e-08!57;UBERON:0006241!2.79e-08!57;UBERON:0007135!2.79e-08!57;UBERON:0000033!6.30e-08!123;UBERON:0006915!8.06e-08!3;UBERON:0002018!8.06e-08!3;UBERON:0002217!8.06e-08!3;UBERON:0007616!8.06e-08!3;UBERON:0000153!2.10e-07!129;UBERON:0007811!2.10e-07!129;UBERON:0000988!3.04e-07!3;UBERON:0005705!7.49e-07!1;UBERON:0008193!7.49e-07!1;UBERON:0002514!7.49e-07!1;UBERON:0003462!7.49e-07!1;UBERON:0008001!7.49e-07!1;UBERON:0007914!7.49e-07!1;UBERON:0003457!7.49e-07!1;UBERON:0009292!7.49e-07!1;UBERON:0007375!7.49e-07!1;UBERON:0003323!7.49e-07!1;UBERON:0002397!7.49e-07!1;UBERON:0001709!7.49e-07!1;UBERON:0004066!7.49e-07!1;UBERON:0002244!7.49e-07!1;UBERON:0005620!7.49e-07!1;UBERON:0004068!7.49e-07!1;UBERON:0004362!7.49e-07!1|ontology_enrichment_uberon_v019=UBERON:0007846;4.60e-23;3!UBERON:0000043;4.60e-23;3!UBERON:0007845;4.60e-23;3!UBERON:0005705;2.66e-18;1!UBERON:0008193;2.66e-18;1!UBERON:0010912;2.66e-18;1!UBERON:0002514;2.66e-18;1!UBERON:0003457;2.66e-18;1!UBERON:0008907;2.66e-18;1!UBERON:0008001;2.66e-18;1!UBERON:0007213;2.66e-18;1!UBERON:0009891;2.66e-18;1!UBERON:0007914;2.66e-18;1!UBERON:0007375;2.66e-18;1!UBERON:0003323;2.66e-18;1!UBERON:0010258;2.66e-18;1!UBERON:0005253;2.66e-18;1!UBERON:0007842;2.66e-18;1!UBERON:0002397;2.66e-18;1!UBERON:0003113;2.66e-18;1!UBERON:0003277;2.66e-18;1!UBERON:0001709;2.66e-18;1!UBERON:0002244;2.66e-18;1!UBERON:0005620;2.66e-18;1!UBERON:0010364;2.66e-18;1!UBERON:0004288;2.66e-18;1!UBERON:0011137;2.69e-14;11!UBERON:0010323;2.69e-14;11!UBERON:0001758;5.08e-12;6!UBERON:0003672;5.08e-12;6!UBERON:0003129;1.94e-10;7!UBERON:0000075;5.06e-10;16!UBERON:0004089;7.98e-10;2!UBERON:0006915;9.64e-07;3!UBERON:0007616;9.64e-07;3!UBERON:0002217;9.64e-07;3!UBERON:0002018;9.64e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.12e-23,3;UBERON:0000043,4.12e-23,3;UBERON:0007845,4.12e-23,3;UBERON:0005705,2.66e-18,1;UBERON:0008193,2.66e-18,1;UBERON:0010912,2.66e-18,1;UBERON:0002514,2.66e-18,1;UBERON:0003457,2.66e-18,1;UBERON:0008907,2.66e-18,1;UBERON:0008001,2.66e-18,1;UBERON:0007213,2.66e-18,1;UBERON:0009891,2.66e-18,1;UBERON:0007914,2.66e-18,1;UBERON:0009292,2.66e-18,1;UBERON:0003099,2.66e-18,1;UBERON:0007375,2.66e-18,1;UBERON:0003323,2.66e-18,1;UBERON:0010258,2.66e-18,1;UBERON:0007842,2.66e-18,1;UBERON:0009494,2.66e-18,1;UBERON:0010042,2.66e-18,1;UBERON:0010045,2.66e-18,1;UBERON:0010259,2.66e-18,1;UBERON:0010359,2.66e-18,1;UBERON:0009526,2.66e-18,1;UBERON:0002397,2.66e-18,1;UBERON:0003113,2.66e-18,1;UBERON:0003277,2.66e-18,1;UBERON:0001709,2.66e-18,1;UBERON:0004066,2.66e-18,1;UBERON:0002244,2.66e-18,1;UBERON:0005620,2.66e-18,1;UBERON:0004362,2.66e-18,1;UBERON:0010364,2.66e-18,1;UBERON:0010046,2.66e-18,1;UBERON:0005868,2.66e-18,1;UBERON:0007238,2.66e-18,1;UBERON:0004288,2.66e-18,1;UBERON:0004068,2.66e-18,1;UBERON:0010334,2.66e-18,1;UBERON:0003852,2.66e-18,1;UBERON:0010253,2.66e-18,1;UBERON:0010323,2.69e-14,11;UBERON:0001758,5.08e-12,6;UBERON:0003672,5.08e-12,6;UBERON:0011137,2.28e-11,14;UBERON:0003129,1.94e-10,7;UBERON:0000075,5.06e-10,16;UBERON:0005253,7.98e-10,2;UBERON:0004089,7.98e-10,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,2.00535164254356,3.62116297402059,0,8.75942766544745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0.877955241761676,4.90380473278431,1.35214253015937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.921845842708516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.964771509003264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,1.40558667435203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48802444071178,0,0,0,0,0,9.16957453595778,0,0.256916900385838,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0.942693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33883824611688,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97596014533401,0.924351257262837,2.16313281061895,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:57354303..57354312,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57354303..57354312,- | |||
|id=chr8:57354303..57354312,- | |||
|ontology_enrichment_celltype=CL:0000153!1.23e-20!9;CL:0000447!1.23e-20!9;CL:0000135!1.15e-16!3;CL:0000386!1.15e-16!3;CL:0000388!1.15e-16!3;CL:0000667!1.67e-14!6;CL:0000058!1.67e-14!6;CL:0000138!1.67e-14!6;CL:0000499!2.57e-14!27;CL:0002556!5.49e-14!6;CL:0000327!4.75e-13!14;CL:0000214!8.06e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000153;8.53e-30;9!CL:0000447;8.53e-30;9!CL:0000138;1.10e-25;6!CL:0000135;4.60e-23;3!CL:0000388;4.60e-23;3!CL:0000499;3.73e-21;28!CL:0000327;4.65e-18;15!CL:0002556;5.08e-12;6!CL:0000151;5.07e-07;36!CL:0000214;9.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,9.90e-30,9;CL:0000447,9.90e-30,9;CL:0000058,1.19e-25,6;CL:0000138,1.19e-25,6;CL:0000135,4.12e-23,3;CL:0000388,4.12e-23,3;CL:0000499,3.87e-21,28;CL:0000327,5.08e-18,15;CL:0002556,5.08e-12,6;CL:0000151,1.09e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.66e-18;1!UBERON:0003852;2.66e-18;1!UBERON:0006222;1.22e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!7.40e-21!4;UBERON:0002435!7.40e-21!4;UBERON:0000204!7.40e-21!4;UBERON:0010082!7.40e-21!4;UBERON:0000043!1.15e-16!3;UBERON:0005383!2.92e-16!3;UBERON:0005382!2.92e-16!3;UBERON:0001758!5.49e-14!6;UBERON:0003672!5.49e-14!6;UBERON:0002308!6.19e-14!9;UBERON:0000125!6.19e-14!9;UBERON:0009663!5.57e-12!7;UBERON:0003129!1.05e-11!11;UBERON:0001873!2.09e-11!2;UBERON:0010122!2.09e-11!2;UBERON:0000075!7.31e-10!13;UBERON:0005944!7.31e-10!13;UBERON:0004288!7.31e-10!13;UBERON:0003089!7.31e-10!13;UBERON:0002420!2.45e-09!9;UBERON:0007245!2.45e-09!9;UBERON:0010009!2.45e-09!9;UBERON:0010011!2.45e-09!9;UBERON:0000454!2.45e-09!9;UBERON:0001049!2.79e-08!57;UBERON:0005068!2.79e-08!57;UBERON:0006241!2.79e-08!57;UBERON:0007135!2.79e-08!57;UBERON:0000033!6.30e-08!123;UBERON:0006915!8.06e-08!3;UBERON:0002018!8.06e-08!3;UBERON:0002217!8.06e-08!3;UBERON:0007616!8.06e-08!3;UBERON:0000153!2.10e-07!129;UBERON:0007811!2.10e-07!129;UBERON:0000988!3.04e-07!3;UBERON:0005705!7.49e-07!1;UBERON:0008193!7.49e-07!1;UBERON:0002514!7.49e-07!1;UBERON:0003462!7.49e-07!1;UBERON:0008001!7.49e-07!1;UBERON:0007914!7.49e-07!1;UBERON:0003457!7.49e-07!1;UBERON:0009292!7.49e-07!1;UBERON:0007375!7.49e-07!1;UBERON:0003323!7.49e-07!1;UBERON:0002397!7.49e-07!1;UBERON:0001709!7.49e-07!1;UBERON:0004066!7.49e-07!1;UBERON:0002244!7.49e-07!1;UBERON:0005620!7.49e-07!1;UBERON:0004068!7.49e-07!1;UBERON:0004362!7.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.60e-23;3!UBERON:0000043;4.60e-23;3!UBERON:0007845;4.60e-23;3!UBERON:0005705;2.66e-18;1!UBERON:0008193;2.66e-18;1!UBERON:0010912;2.66e-18;1!UBERON:0002514;2.66e-18;1!UBERON:0003457;2.66e-18;1!UBERON:0008907;2.66e-18;1!UBERON:0008001;2.66e-18;1!UBERON:0007213;2.66e-18;1!UBERON:0009891;2.66e-18;1!UBERON:0007914;2.66e-18;1!UBERON:0007375;2.66e-18;1!UBERON:0003323;2.66e-18;1!UBERON:0010258;2.66e-18;1!UBERON:0005253;2.66e-18;1!UBERON:0007842;2.66e-18;1!UBERON:0002397;2.66e-18;1!UBERON:0003113;2.66e-18;1!UBERON:0003277;2.66e-18;1!UBERON:0001709;2.66e-18;1!UBERON:0002244;2.66e-18;1!UBERON:0005620;2.66e-18;1!UBERON:0010364;2.66e-18;1!UBERON:0004288;2.66e-18;1!UBERON:0011137;2.69e-14;11!UBERON:0010323;2.69e-14;11!UBERON:0001758;5.08e-12;6!UBERON:0003672;5.08e-12;6!UBERON:0003129;1.94e-10;7!UBERON:0000075;5.06e-10;16!UBERON:0004089;7.98e-10;2!UBERON:0006915;9.64e-07;3!UBERON:0007616;9.64e-07;3!UBERON:0002217;9.64e-07;3!UBERON:0002018;9.64e-07;3 | |||
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|short_description=p@chr8:57354303..57354312,- | |||
}} |
Revision as of 05:37, 14 September 2013
Short description: | p@chr8:57354303..57354312, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:57354303..57354312, - |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 9.90e-30 | 9 |
carbohydrate secreting cell | 9.90e-30 | 9 |
chondroblast | 1.19e-25 | 6 |
chondrocyte | 1.19e-25 | 6 |
fibrocyte | 4.12e-23 | 3 |
tendon cell | 4.12e-23 | 3 |
stromal cell | 3.87e-21 | 28 |
extracellular matrix secreting cell | 5.08e-18 | 15 |
fibroblast of periodontium | 5.08e-12 | 6 |
secretory cell | 1.09e-07 | 36 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.