FFCP PHASE1:Hg19::chr8:57354211..57354220,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C309|description=CAGE_peak_at_chr8:57354211..57354220,+|id=chr8:57354211..57354220,+|ontology_enrichment_celltype=CL:0000153!5.97e-19!9;CL:0000447!5.97e-19!9;CL:0000327!4.06e-12!14;CL:0000499!1.19e-11!27;CL:0000667!3.64e-11!6;CL:0000058!3.64e-11!6;CL:0000138!3.64e-11!6;CL:0002556!6.04e-11!6;CL:0000135!3.49e-10!3;CL:0000386!3.49e-10!3;CL:0000388!3.49e-10!3;CL:0000214!8.97e-10!3|ontology_enrichment_celltype_v019=CL:0000138;1.11e-33;6!CL:0000153;9.70e-23;9!CL:0000447;9.70e-23;9!CL:0002556;1.17e-15;6!CL:0000327;6.02e-14;15!CL:0000499;5.20e-13;28!CL:0000062;1.07e-10;9!CL:0000135;1.30e-08;3!CL:0000388;1.30e-08;3|ontology_enrichment_celltype_v019_2=CL:0000058,1.05e-33,6;CL:0000138,1.05e-33,6;CL:0000153,9.35e-23,9;CL:0000447,9.35e-23,9;CL:0002556,1.13e-15,6;CL:0000327,5.89e-14,15;CL:0000499,5.28e-13,28;CL:0000062,6.35e-09,11;CL:0000375,6.35e-09,11;CL:0000335,6.35e-09,11;CL:0000135,1.40e-08,3;CL:0000388,1.40e-08,3|ontology_enrichment_development_v019=UBERON:0003099;1.07e-23;1!UBERON:0003852;1.07e-23;1!CL:0000335;6.35e-09;11!UBERON:0005062;6.50e-07;4!UBERON:0007284;6.50e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001758!6.04e-11!6;UBERON:0003672!6.04e-11!6;UBERON:0003129!2.50e-10!11;UBERON:0000043!3.49e-10!3;UBERON:0006915!8.97e-10!3;UBERON:0002018!8.97e-10!3;UBERON:0002217!8.97e-10!3;UBERON:0007616!8.97e-10!3;UBERON:0000075!9.40e-09!13;UBERON:0005944!9.40e-09!13;UBERON:0004288!9.40e-09!13;UBERON:0003089!9.40e-09!13;UBERON:0005705!1.65e-08!1;UBERON:0008193!1.65e-08!1;UBERON:0002514!1.65e-08!1;UBERON:0003462!1.65e-08!1;UBERON:0008001!1.65e-08!1;UBERON:0007914!1.65e-08!1;UBERON:0003457!1.65e-08!1;UBERON:0009292!1.65e-08!1;UBERON:0007375!1.65e-08!1;UBERON:0003323!1.65e-08!1;UBERON:0002397!1.65e-08!1;UBERON:0001709!1.65e-08!1;UBERON:0004066!1.65e-08!1;UBERON:0002244!1.65e-08!1;UBERON:0005620!1.65e-08!1;UBERON:0004068!1.65e-08!1;UBERON:0004362!1.65e-08!1;UBERON:0001882!1.14e-07!1;UBERON:0005403!1.14e-07!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0000369!2.43e-07!4;UBERON:0002435!2.43e-07!4;UBERON:0000204!2.43e-07!4;UBERON:0010082!2.43e-07!4|ontology_enrichment_uberon_v019=UBERON:0005705;1.07e-23;1!UBERON:0008193;1.07e-23;1!UBERON:0010912;1.07e-23;1!UBERON:0002514;1.07e-23;1!UBERON:0003457;1.07e-23;1!UBERON:0008907;1.07e-23;1!UBERON:0008001;1.07e-23;1!UBERON:0007213;1.07e-23;1!UBERON:0009891;1.07e-23;1!UBERON:0007914;1.07e-23;1!UBERON:0007375;1.07e-23;1!UBERON:0003323;1.07e-23;1!UBERON:0010258;1.07e-23;1!UBERON:0005253;1.07e-23;1!UBERON:0007842;1.07e-23;1!UBERON:0002397;1.07e-23;1!UBERON:0003113;1.07e-23;1!UBERON:0003277;1.07e-23;1!UBERON:0001709;1.07e-23;1!UBERON:0002244;1.07e-23;1!UBERON:0005620;1.07e-23;1!UBERON:0010364;1.07e-23;1!UBERON:0004288;1.07e-23;1!UBERON:0011137;8.93e-19;11!UBERON:0010323;8.93e-19;11!UBERON:0001758;1.17e-15;6!UBERON:0003672;1.17e-15;6!UBERON:0003129;1.44e-13;7!UBERON:0000075;3.89e-13;16!UBERON:0004089;1.48e-12;2!UBERON:0007846;1.30e-08;3!UBERON:0000043;1.30e-08;3!UBERON:0007845;1.30e-08;3!UBERON:0001708;6.50e-07;4!UBERON:0008895;6.50e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.07e-23,1;UBERON:0008193,1.07e-23,1;UBERON:0010912,1.07e-23,1;UBERON:0002514,1.07e-23,1;UBERON:0003457,1.07e-23,1;UBERON:0008907,1.07e-23,1;UBERON:0008001,1.07e-23,1;UBERON:0007213,1.07e-23,1;UBERON:0009891,1.07e-23,1;UBERON:0007914,1.07e-23,1;UBERON:0009292,1.07e-23,1;UBERON:0003099,1.07e-23,1;UBERON:0007375,1.07e-23,1;UBERON:0003323,1.07e-23,1;UBERON:0010258,1.07e-23,1;UBERON:0007842,1.07e-23,1;UBERON:0009494,1.07e-23,1;UBERON:0010042,1.07e-23,1;UBERON:0010045,1.07e-23,1;UBERON:0010259,1.07e-23,1;UBERON:0010359,1.07e-23,1;UBERON:0009526,1.07e-23,1;UBERON:0002397,1.07e-23,1;UBERON:0003113,1.07e-23,1;UBERON:0003277,1.07e-23,1;UBERON:0001709,1.07e-23,1;UBERON:0004066,1.07e-23,1;UBERON:0002244,1.07e-23,1;UBERON:0005620,1.07e-23,1;UBERON:0004362,1.07e-23,1;UBERON:0010364,1.07e-23,1;UBERON:0010046,1.07e-23,1;UBERON:0005868,1.07e-23,1;UBERON:0007238,1.07e-23,1;UBERON:0004288,1.07e-23,1;UBERON:0004068,1.07e-23,1;UBERON:0010334,1.07e-23,1;UBERON:0003852,1.07e-23,1;UBERON:0010253,1.07e-23,1;UBERON:0010323,8.66e-19,11;UBERON:0001758,1.13e-15,6;UBERON:0003672,1.13e-15,6;UBERON:0011137,6.37e-15,14;UBERON:0003129,1.40e-13,7;UBERON:0000075,3.81e-13,16;UBERON:0005253,1.48e-12,2;UBERON:0004089,1.48e-12,2;UBERON:0007846,1.40e-08,3;UBERON:0000043,1.40e-08,3;UBERON:0007845,1.40e-08,3;UBERON:0000165,1.56e-07,29;UBERON:0000930,1.56e-07,29;UBERON:0001708,6.50e-07,4;UBERON:0008895,6.50e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57354211..57354220,+ | |||
|id=chr8:57354211..57354220,+ | |||
|ontology_enrichment_celltype=CL:0000153!5.97e-19!9;CL:0000447!5.97e-19!9;CL:0000327!4.06e-12!14;CL:0000499!1.19e-11!27;CL:0000667!3.64e-11!6;CL:0000058!3.64e-11!6;CL:0000138!3.64e-11!6;CL:0002556!6.04e-11!6;CL:0000135!3.49e-10!3;CL:0000386!3.49e-10!3;CL:0000388!3.49e-10!3;CL:0000214!8.97e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.11e-33;6!CL:0000153;9.70e-23;9!CL:0000447;9.70e-23;9!CL:0002556;1.17e-15;6!CL:0000327;6.02e-14;15!CL:0000499;5.20e-13;28!CL:0000062;1.07e-10;9!CL:0000135;1.30e-08;3!CL:0000388;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.05e-33,6;CL:0000138,1.05e-33,6;CL:0000153,9.35e-23,9;CL:0000447,9.35e-23,9;CL:0002556,1.13e-15,6;CL:0000327,5.89e-14,15;CL:0000499,5.28e-13,28;CL:0000062,6.35e-09,11;CL:0000375,6.35e-09,11;CL:0000335,6.35e-09,11;CL:0000135,1.40e-08,3;CL:0000388,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.07e-23;1!UBERON:0003852;1.07e-23;1!CL:0000335;6.35e-09;11!UBERON:0005062;6.50e-07;4!UBERON:0007284;6.50e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!6.04e-11!6;UBERON:0003672!6.04e-11!6;UBERON:0003129!2.50e-10!11;UBERON:0000043!3.49e-10!3;UBERON:0006915!8.97e-10!3;UBERON:0002018!8.97e-10!3;UBERON:0002217!8.97e-10!3;UBERON:0007616!8.97e-10!3;UBERON:0000075!9.40e-09!13;UBERON:0005944!9.40e-09!13;UBERON:0004288!9.40e-09!13;UBERON:0003089!9.40e-09!13;UBERON:0005705!1.65e-08!1;UBERON:0008193!1.65e-08!1;UBERON:0002514!1.65e-08!1;UBERON:0003462!1.65e-08!1;UBERON:0008001!1.65e-08!1;UBERON:0007914!1.65e-08!1;UBERON:0003457!1.65e-08!1;UBERON:0009292!1.65e-08!1;UBERON:0007375!1.65e-08!1;UBERON:0003323!1.65e-08!1;UBERON:0002397!1.65e-08!1;UBERON:0001709!1.65e-08!1;UBERON:0004066!1.65e-08!1;UBERON:0002244!1.65e-08!1;UBERON:0005620!1.65e-08!1;UBERON:0004068!1.65e-08!1;UBERON:0004362!1.65e-08!1;UBERON:0001882!1.14e-07!1;UBERON:0005403!1.14e-07!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0000369!2.43e-07!4;UBERON:0002435!2.43e-07!4;UBERON:0000204!2.43e-07!4;UBERON:0010082!2.43e-07!4 | |||
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|short_description=p@chr8:57354211..57354220,+ | |||
}} |
Revision as of 05:36, 14 September 2013
Short description: | p@chr8:57354211..57354220, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:57354211..57354220, + |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.05e-33 | 6 |
chondrocyte | 1.05e-33 | 6 |
GAG secreting cell | 9.35e-23 | 9 |
carbohydrate secreting cell | 9.35e-23 | 9 |
fibroblast of periodontium | 1.13e-15 | 6 |
extracellular matrix secreting cell | 5.89e-14 | 15 |
stromal cell | 5.28e-13 | 28 |
osteoblast | 6.35e-09 | 11 |
osteoprogenitor cell | 6.35e-09 | 11 |
mesenchyme condensation cell | 6.35e-09 | 11 |
fibrocyte | 1.40e-08 | 3 |
tendon cell | 1.40e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.