FFCP PHASE1:Hg19::chr8:55370487..55370503,+: Difference between revisions
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{{FFCP | 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06702183149,21.2297727962322,12.3084331922025,0,0,0,0,4.69281884806909,45.2293343476606,60.627530569045,6.65756774185513,23.347760056559,0|short_description=p1@SOX17}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=64321 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18122 | |||
|TSSclassifier=S | |||
|UniProt=Q9H6I2 | |||
|association_with_transcript=0bp_to_ENST00000297316,NM_022454,uc003xsb.3_5end | |||
|coexpression_cluster_id=C4762 | |||
|description=CAGE_peak_1_at_SOX17_5end | |||
|id=chr8:55370487..55370503,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.28e-20!119;CL:0002139!1.24e-18!24;CL:0000359!4.99e-18!32;CL:0000115!1.19e-16!35;CL:0002078!4.60e-15!44;CL:0000071!8.64e-15!18;CL:0002546!8.64e-15!18;CL:0000192!4.35e-13!42;CL:0000514!4.35e-13!42;CL:0000213!2.36e-12!57;CL:0000215!2.36e-12!57;CL:0000183!1.10e-10!59;CL:0000187!2.74e-10!54;CL:0000393!1.84e-09!60;CL:0000211!1.84e-09!60;CL:0000680!2.00e-09!57;CL:0000056!2.00e-09!57;CL:0000355!2.00e-09!57;CL:1000413!1.54e-08!9;CL:0002539!3.97e-08!10;CL:0002494!4.01e-08!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.60e-20;24!CL:0000359;1.81e-17;32!CL:0000115;1.58e-16;36!CL:0000071;2.95e-16;18!CL:0002078;1.25e-10;45!CL:1000413;2.60e-09;9!CL:0000192;2.70e-09;43!CL:0002539;7.48e-09;10!CL:0000213;1.03e-08;58!CL:0000215;1.03e-08;58!CL:0002494;3.59e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.59e-20,24;CL:0000222,1.90e-19,121;CL:0000115,1.92e-19,36;CL:0000359,2.82e-18,32;CL:0002078,1.83e-16,45;CL:0000071,2.98e-16,18;CL:0002546,2.98e-16,18;CL:0000213,2.10e-13,58;CL:0000215,2.10e-13,58;CL:0000192,7.00e-12,43;CL:0000514,7.00e-12,43;CL:1000413,2.60e-09,9;CL:0000187,6.90e-09,55;CL:0002539,7.44e-09,10;CL:0002494,3.26e-08,16;CL:0000680,7.50e-08,58;CL:0000056,7.50e-08,58;CL:0000355,7.50e-08,58;CL:0000393,1.46e-07,61;CL:0000211,1.46e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;2.95e-16;18!CL:0000514;2.70e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!7.82e-07!14;DOID:120!8.79e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:120;3.34e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:120,3.49e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.54e-48!84;UBERON:0000025!6.86e-44!194;UBERON:0003914!1.22e-40!118;UBERON:0004111!1.30e-40!241;UBERON:0000055!4.38e-40!69;UBERON:0001981!2.74e-39!60;UBERON:0007500!2.74e-39!60;UBERON:0004537!2.74e-39!60;UBERON:0006965!2.74e-39!60;UBERON:0000477!4.03e-39!286;UBERON:0002049!3.42e-34!79;UBERON:0007798!3.42e-34!79;UBERON:0001009!7.98e-32!113;UBERON:0001637!3.22e-31!42;UBERON:0003509!3.22e-31!42;UBERON:0004572!3.22e-31!42;UBERON:0004535!3.36e-30!110;UBERON:0007023!6.53e-26!115;UBERON:0000483!7.13e-25!309;UBERON:0004573!4.70e-24!33;UBERON:0004571!4.70e-24!33;UBERON:0000119!4.99e-24!312;UBERON:0000468!5.92e-17!659;UBERON:0000467!6.67e-17!625;UBERON:0000480!1.01e-16!626;UBERON:0000922!4.99e-16!612;UBERON:0000947!2.60e-15!21;UBERON:0010191!2.60e-15!21;UBERON:0000490!3.22e-15!138;UBERON:0003103!5.93e-15!69;UBERON:0001986!8.64e-15!18;UBERON:0004638!8.64e-15!18;UBERON:0004852!8.64e-15!18;UBERON:0000481!2.21e-14!347;UBERON:0007100!4.11e-14!27;UBERON:0002050!4.85e-14!605;UBERON:0005423!4.85e-14!605;UBERON:0000923!1.28e-13!604;UBERON:0005291!1.28e-13!604;UBERON:0006598!1.28e-13!604;UBERON:0002532!1.28e-13!604;UBERON:0000487!1.49e-12!22;UBERON:0000948!1.52e-12!24;UBERON:0005498!1.52e-12!24;UBERON:0004140!1.52e-12!24;UBERON:0009881!1.52e-12!24;UBERON:0004141!1.52e-12!24;UBERON:0003084!1.52e-12!24;UBERON:0007005!1.52e-12!24;UBERON:0004139!1.52e-12!24;UBERON:0004291!1.52e-12!24;UBERON:0002385!1.15e-11!63;UBERON:0001015!1.15e-11!63;UBERON:0000383!1.15e-11!63;UBERON:0000926!2.68e-11!448;UBERON:0004120!2.68e-11!448;UBERON:0006603!2.68e-11!448;UBERON:0001134!4.12e-11!61;UBERON:0002036!4.12e-11!61;UBERON:0003082!4.12e-11!61;UBERON:0006914!1.20e-10!25;UBERON:0003081!1.46e-10!216;UBERON:0005256!6.35e-10!143;UBERON:0003104!5.48e-09!238;UBERON:0009142!5.48e-09!238;UBERON:0001049!6.69e-09!57;UBERON:0005068!6.69e-09!57;UBERON:0006241!6.69e-09!57;UBERON:0007135!6.69e-09!57;UBERON:0004290!7.93e-09!70;UBERON:0003915!1.54e-08!9;UBERON:0004700!1.54e-08!9;UBERON:0001917!1.54e-08!9;UBERON:0003080!2.43e-08!42;UBERON:0004237!3.97e-08!10;UBERON:0004695!3.97e-08!10;UBERON:0002111!3.97e-08!10;UBERON:0004178!3.97e-08!10;UBERON:0002780!7.94e-08!41;UBERON:0001890!7.94e-08!41;UBERON:0006240!7.94e-08!41;UBERON:0002616!8.10e-08!59;UBERON:0003133!1.02e-07!48;UBERON:0000991!6.75e-07!21;UBERON:0009196!6.75e-07!21;UBERON:0009117!6.75e-07!21;UBERON:0005564!6.75e-07!21;UBERON:0003513!8.05e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.28e-25;42!UBERON:0003509;4.28e-25;42!UBERON:0004572;4.28e-25;42!UBERON:0004573;2.58e-24;33!UBERON:0004571;2.58e-24;33!UBERON:0007500;5.37e-22;56!UBERON:0001981;5.37e-22;56!UBERON:0004537;5.37e-22;56!UBERON:0000055;2.54e-20;65!UBERON:0000947;7.72e-17;21!UBERON:0010191;7.72e-17;21!UBERON:0004638;2.95e-16;18!UBERON:0001986;2.95e-16;18!UBERON:0004852;2.95e-16;18!UBERON:0003914;4.21e-15;74!UBERON:0002049;1.63e-13;75!UBERON:0007798;1.63e-13;75!UBERON:0007100;3.10e-13;25!UBERON:0000487;3.91e-13;22!UBERON:0000948;1.63e-11;22!UBERON:0006914;1.42e-10;25!UBERON:0001009;1.13e-09;112!UBERON:0004535;1.21e-09;109!UBERON:0000025;2.08e-09;93!UBERON:0003915;2.60e-09;9!UBERON:0004700;2.60e-09;9!UBERON:0001917;2.60e-09;9!UBERON:0004237;7.48e-09;10!UBERON:0004695;7.48e-09;10!UBERON:0002111;7.48e-09;10!UBERON:0004178;7.48e-09;10!UBERON:0007023;1.80e-07;114!UBERON:0000992;3.84e-07;13!UBERON:0003513;4.43e-07;7!UBERON:0003103;5.14e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.26e-52,83;UBERON:0000055,1.75e-44,68;UBERON:0007500,2.60e-43,59;UBERON:0001981,2.60e-43,59;UBERON:0004537,2.60e-43,59;UBERON:0006965,2.60e-43,59;UBERON:0000025,1.13e-41,192;UBERON:0003914,1.50e-40,117;UBERON:0004111,8.78e-38,240;UBERON:0002049,5.34e-36,78;UBERON:0007798,5.34e-36,78;UBERON:0001637,1.63e-34,42;UBERON:0003509,1.63e-34,42;UBERON:0004572,1.63e-34,42;UBERON:0001009,3.46e-34,112;UBERON:0004535,2.14e-32,109;UBERON:0004573,1.51e-26,33;UBERON:0004571,1.51e-26,33;UBERON:0007023,5.23e-26,114;UBERON:0000483,5.58e-20,306;UBERON:0000119,2.58e-19,309;UBERON:0000947,7.83e-17,21;UBERON:0010191,7.83e-17,21;UBERON:0004638,2.98e-16,18;UBERON:0001986,2.98e-16,18;UBERON:0004852,2.98e-16,18;UBERON:0003103,5.17e-15,68;UBERON:0007100,8.13e-15,27;UBERON:0000487,4.06e-13,22;UBERON:0000948,4.40e-13,24;UBERON:0005498,4.40e-13,24;UBERON:0004140,4.40e-13,24;UBERON:0009881,4.40e-13,24;UBERON:0004141,4.40e-13,24;UBERON:0003084,4.40e-13,24;UBERON:0007005,4.40e-13,24;UBERON:0004139,4.40e-13,24;UBERON:0004291,4.40e-13,24;UBERON:0000922,2.68e-12,592;UBERON:0000490,1.31e-11,148;UBERON:0005423,2.47e-11,581;UBERON:0003081,8.45e-11,203;UBERON:0000923,1.30e-10,560;UBERON:0010316,1.30e-10,560;UBERON:0005291,1.30e-10,560;UBERON:0006598,1.30e-10,560;UBERON:0010317,1.30e-10,560;UBERON:0002532,1.30e-10,560;UBERON:0002050,1.34e-10,564;UBERON:0006914,1.47e-10,25;UBERON:0002385,4.19e-10,64;UBERON:0001015,4.19e-10,64;UBERON:0000383,4.19e-10,64;UBERON:0005256,4.53e-10,122;UBERON:0007503,4.77e-10,78;UBERON:0000926,1.08e-09,315;UBERON:0004120,1.08e-09,315;UBERON:0006603,1.08e-09,315;UBERON:0001134,1.57e-09,62;UBERON:0002036,1.57e-09,62;UBERON:0003082,1.57e-09,62;UBERON:0003915,2.60e-09,9;UBERON:0004700,2.60e-09,9;UBERON:0001917,2.60e-09,9;UBERON:0010314,6.63e-09,132;UBERON:0004237,7.44e-09,10;UBERON:0004695,7.44e-09,10;UBERON:0002111,7.44e-09,10;UBERON:0004178,7.44e-09,10;UBERON:0003104,1.59e-08,160;UBERON:0009142,1.59e-08,160;UBERON:0003077,5.77e-08,72;UBERON:0007285,5.77e-08,72;UBERON:0003133,8.44e-08,48;UBERON:0002329,8.87e-08,71;UBERON:0003059,8.87e-08,71;UBERON:0007282,8.87e-08,71;UBERON:0004290,8.87e-08,71;UBERON:0009618,8.87e-08,71;UBERON:0007524,1.10e-07,73;UBERON:0001049,2.54e-07,56;UBERON:0005068,2.54e-07,56;UBERON:0006241,2.54e-07,56;UBERON:0007135,2.54e-07,56;UBERON:0000992,4.01e-07,13;UBERON:0003513,4.48e-07,7;UBERON:0003134,4.96e-07,37;UBERON:0000474,4.96e-07,37;UBERON:0001048,6.94e-07,160;UBERON:0002780,9.48e-07,41;UBERON:0001890,9.48e-07,41;UBERON:0003080,9.48e-07,41;UBERON:0006240,9.48e-07,41 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,2.09340350391728,4.80571018686379,0.263766978228454,0,0,80.679017574213,85.5826229794047,94.9403117503585,110.272812526655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4382223522945,16.6221330396589,0,0,0.144846518960824,2.3858578411533,0.973269740605272,0,0,0.175669571386252,15.5210204464789,0,0,0,0,0,0,0,0,122.040118123157,83.4427557252941,152.394680205734,86.4921151143735,84.738886114401,155.716811738078,133.756778583559,21.190174251885,14.5864167701551,55.8983423316999,326.694576175518,53.9793195060144,390.011167961975,36.0309818738951,184.712364117041,31.6121038125642,27.3925834603927,29.5042078866304,111.921145350095,78.7890497441547,90.6848632455516,0,0,0,0,37.4826314527156,16.0215108783995,31.8388649031183,43.2695426281996,12.3349072031308,121.693855131864,24.4200872932988,4.97937656639626,59.8115383989415,61.7885993768874,0,0,0,0,13.6913237170668,1.34503812496621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.7248568795766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,1.45782745153634,14.4080489158203,4.66474747569167,7.82194637714448,9.85438869504741,0,0,0,0,0,5.56041960187266,5.56329477257736,6.02527574708705,5.5146986366197,3.7039505495709,6.64357733511071,2.69662616320329,3.13954344200554,5.00171304030308,70.8629236439662,64.5112159495851,4.5273141246454,10.2906097969879,0,0.982827216677626,11.2250082269467,0,0,0,0,0,0,0,0,0,0,0,0,114.049493731248,134.265798647217,60.6910745628368,0,0,0,0,0,0,0,0,0,0,3.4504441124869,0.985326475791887,0,1.65862492432618,0,0.50496973370552,0,0,0,6.84289784090821,0,0,0,0,0,0,0.646358578788889,7.15312891703765,5.917119267892,0,0,0,1.41849132023278,0,0.285955987316295,0,0,3.90883421152482,0.355391948742546,0.791951872933429,4.52159065589379,4.35766729300147,2.59929777073348,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,1.56640925970192,0,0,0,0,2.72814814301633,11.6504807657348,19.6553690664292,0,0,0,0,0,0.160853921143607,2.96836132889982,0.308419387605311,0.355123450626254,0.328508624055237,33.2322834677517,0.116210378459959,0,0,0.0920809889358963,0,0,0.524497659837696,0,0.770153371044148,0.784349769176855,2.92278449306521,3.79985864014353,73.9266996460828,32.8280851183675,19.8642642813968,165.02316037861,1.35473218771926,2.50844886927427,1.78413391131527,1.66215201785745,0.447749509444357,0,0,0,0,0,9.99497812982906,0,0,0,0.650060246036521,8.03419649220798,2.80345083047154,0,0,0,0,0,0.170453254832202,0.534192213880424,0,0,0,0,8.83206543664843,7.24068397710472,92.7059569313598,87.7895703501853,63.3444176077256,113.961221961835,95.4419728385188,35.3518470252718,0.372158369359667,0.949138274156178,4.00323407240032,1.79128453917934,0,57.5947878745946,115.387450109287,0,0,0.235624804691373,76.0206130715668,64.9892316809334,144.491650489971,0,83.106299964268,97.198135016215,0,0,73.4552758031578,47.9687848885128,74.3051652270166,82.4287664277074,0.578775534266688,0,92.3242215180303,109.057871331112,97.7483740786878,0,0,94.1611575910501,2.12856638442359,0.422215270595328,0,0,0,0,1.34060455107157,0,9.50852387845469,0,0,0,0,0,0,0,0,0,0,0,0,0,194.420930763198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.1893044258452,0,0,0,0,0,0,0.994147647766298,3.79807424308384,7.79160935160341,0,0,14.345855154077,22.1027132424918,0,0,0,0,0,0,0,27.2255799557937,0,0,1.93866549219044,3.6179558283122,0,0,0,71.0499583926098,0,0,0,0,0,0,1.77148277162768,4.82385754501632,0,2.32216445855572,2.36438095162838,6.14279112031123,0,0,42.7843437281112,0,0,0,0.108647371922008,1.5950057986596,2.10674464824283,4.79731298416771,0,0,0,0,0,0,0,0,30.8057174210919,126.831891939658,0,0,4.97630965539252,18.5760885457012,12.2206028986725,0,0,0,4.44847477672468,28.0902176554576,3.98249557733077,0,0,0,3.55125962564451,4.83962864194656,3.67287313956588,9.73073326278715,0,0,0,0,0,0,11.0997722951619,0,153.253248949921,0,0,17.647393492445,0,5.41835455218877,5.40860946437773,5.3375047084586,25.217144286989,20.5636775191196,12.6549214837098,0,0.794858446811959,3.8619585533086,0.782205530939212,17.5547816350859,46.1058468637002,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,4.92859364011175,0,0,0,19.2704856877855,13.2913045926777,21.5361907373044,10.7826660269455,26.6120149844674,50.8830922967469,33.9276536057968,8.64719720501769,66.4026912306487,0,0,0,0,0,0.795229689809303,3.81369537112412,11.7349798379464,0.275078873194468,0.83088067605837,0,0,5.22446187259012,0,6.54087370583345,13.8480112676395,0,0,0,17.1526878329608,30.4562306368099,2.28841683889275,0,0,0,0,0,0,0,2.93104467356165,1.32506888912221,0.904980694530854,3.43804764530994,2.05304205461195,0,25.4154041911113,24.9954845108469,20.7119527673598,4.46549419630756,0,0,0,70.1782966346621,176.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| |||
|short_description=p1@SOX17 | |||
}} |
Revision as of 05:33, 14 September 2013
Short description: | p1@SOX17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SOX17_5end |
Coexpression cluster: | C4762_Endothelial_Wilms_mature_Renal_endometrioid_Smooth_Lymphatic |
Association with transcript: | 0bp_to_ENST00000297316, NM_022454, uc003xsb.3_5end |
EntrezGene: | SOX17 |
HGNC: | 18122 |
UniProt: | Q9H6I2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.59e-20 | 24 |
mesodermal cell | 1.90e-19 | 121 |
endothelial cell | 1.92e-19 | 36 |
vascular associated smooth muscle cell | 2.82e-18 | 32 |
meso-epithelial cell | 1.83e-16 | 45 |
blood vessel endothelial cell | 2.98e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.98e-16 | 18 |
lining cell | 2.10e-13 | 58 |
barrier cell | 2.10e-13 | 58 |
smooth muscle cell | 7.00e-12 | 43 |
smooth muscle myoblast | 7.00e-12 | 43 |
endothelial cell of artery | 2.60e-09 | 9 |
muscle cell | 6.90e-09 | 55 |
aortic smooth muscle cell | 7.44e-09 | 10 |
cardiocyte | 3.26e-08 | 16 |
muscle precursor cell | 7.50e-08 | 58 |
myoblast | 7.50e-08 | 58 |
multi-potent skeletal muscle stem cell | 7.50e-08 | 58 |
electrically responsive cell | 1.46e-07 | 61 |
electrically active cell | 1.46e-07 | 61 |
Ontology term | p-value | n |
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