FFCP PHASE1:Hg19::chr8:23432511..23432524,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2010|description=CAGE_peak_at_chr8:23432511..23432524,+|id=chr8:23432511..23432524,+|ontology_enrichment_celltype=CL:0000860!5.64e-09!45;CL:0002057!3.06e-08!42|ontology_enrichment_celltype_v019=CL:0000775;3.51e-22;3!CL:0000764;1.07e-15;2!CL:0000558;1.07e-15;2!CL:0000094;1.26e-14;8!CL:0000860;2.93e-11;33!CL:0002057;2.93e-11;33!CL:0000081;1.13e-10;11!CL:0000576;2.06e-08;48!CL:0000228;4.10e-08;1!CL:0002372;4.10e-08;1!CL:0000473;1.29e-07;39!CL:0000234;1.29e-07;39|ontology_enrichment_celltype_v019_2=CL:0000775,3.52e-22,3;CL:0000764,1.07e-15,2;CL:0000765,1.07e-15,2;CL:0000050,1.07e-15,2;CL:0000038,1.07e-15,2;CL:0000558,1.07e-15,2;CL:0000547,1.07e-15,2;CL:0000549,1.07e-15,2;CL:0000550,1.07e-15,2;CL:0000552,1.07e-15,2;CL:0000094,1.22e-14,8;CL:0000766,1.55e-13,72;CL:0000763,3.78e-13,108;CL:0000049,3.78e-13,108;CL:0000860,1.00e-11,42;CL:0002057,1.00e-11,42;CL:0000081,1.10e-10,11;CL:0000839,1.72e-10,66;CL:0000473,4.35e-10,48;CL:0000234,4.35e-10,48;CL:0000228,3.33e-08,1;CL:0002372,3.33e-08,1;CL:0002032,7.77e-08,161;CL:0000837,7.77e-08,161;CL:0002194,8.50e-08,59;CL:0000576,8.50e-08,59;CL:0000040,8.50e-08,59;CL:0000559,8.50e-08,59;CL:0002009,1.68e-07,61;CL:0000037,2.19e-07,168;CL:0000988,7.37e-07,177|ontology_enrichment_development_v019=CL:0002057;8.55e-08;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:6193;4.10e-08;1|ontology_enrichment_disease_v019_2=DOID:6193,3.57e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000178;3.94e-22;15!UBERON:0000179;3.94e-22;15!UBERON:0000463;3.94e-22;15!UBERON:0002390;4.53e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.21e-22,15;UBERON:0000179,4.21e-22,15;UBERON:0000463,4.21e-22,15;UBERON:0002390,1.18e-14,98;UBERON:0003061,1.18e-14,98;UBERON:0002193,5.01e-13,108|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.527533956456907,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,1.08505435357926,0,0,0,0,0,1.21292030593908,0.464858073811369,0.411167888021826,0.309706370895104,1.1507695692886,0.512321413058201,0.709446689665756,0,0,0,0.564727018627814,0.272906150057846,0.449446968890169,1.53041946185451,0,1.27867425159808,0,1.79517291859469,0.852449501065388,0.580418477257168,0,1.24564449799115,1.25624332628372,3.12889751052121,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.786021525498329,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.161646056818812,0.710019185033229,0,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0.205476322550383,0,0.336255431980582,0,0,0.128343036279748,0,0,0,0,0,2.99602809578873,5.9832291840805,2.07207756718018,0.24538298343828,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,4.38519753291869,7.32019262869721,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,1.01489521846434,0.764637207142375,2.27858874869665,2.1440859791201,1.64544909234478,0.648473311192717,2.16012574895246,3.17250070517708,0,0,0,0.185803175125719,0.28853842595289,0,0.318852545457645,0,0,0,0,0.280797178113459,0.456469358066384,0,0,0,0,0.2017997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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2010 | |||
|description=CAGE_peak_at_chr8:23432511..23432524,+ | |||
|id=chr8:23432511..23432524,+ | |||
|ontology_enrichment_celltype=CL:0000860!5.64e-09!45;CL:0002057!3.06e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000775;3.51e-22;3!CL:0000764;1.07e-15;2!CL:0000558;1.07e-15;2!CL:0000094;1.26e-14;8!CL:0000860;2.93e-11;33!CL:0002057;2.93e-11;33!CL:0000081;1.13e-10;11!CL:0000576;2.06e-08;48!CL:0000228;4.10e-08;1!CL:0002372;4.10e-08;1!CL:0000473;1.29e-07;39!CL:0000234;1.29e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.52e-22,3;CL:0000764,1.07e-15,2;CL:0000765,1.07e-15,2;CL:0000050,1.07e-15,2;CL:0000038,1.07e-15,2;CL:0000558,1.07e-15,2;CL:0000547,1.07e-15,2;CL:0000549,1.07e-15,2;CL:0000550,1.07e-15,2;CL:0000552,1.07e-15,2;CL:0000094,1.22e-14,8;CL:0000766,1.55e-13,72;CL:0000763,3.78e-13,108;CL:0000049,3.78e-13,108;CL:0000860,1.00e-11,42;CL:0002057,1.00e-11,42;CL:0000081,1.10e-10,11;CL:0000839,1.72e-10,66;CL:0000473,4.35e-10,48;CL:0000234,4.35e-10,48;CL:0000228,3.33e-08,1;CL:0002372,3.33e-08,1;CL:0002032,7.77e-08,161;CL:0000837,7.77e-08,161;CL:0002194,8.50e-08,59;CL:0000576,8.50e-08,59;CL:0000040,8.50e-08,59;CL:0000559,8.50e-08,59;CL:0002009,1.68e-07,61;CL:0000037,2.19e-07,168;CL:0000988,7.37e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.55e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;4.10e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.57e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.94e-22;15!UBERON:0000179;3.94e-22;15!UBERON:0000463;3.94e-22;15!UBERON:0002390;4.53e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.21e-22,15;UBERON:0000179,4.21e-22,15;UBERON:0000463,4.21e-22,15;UBERON:0002390,1.18e-14,98;UBERON:0003061,1.18e-14,98;UBERON:0002193,5.01e-13,108 | |||
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| |||
|short_description=p@chr8:23432511..23432524,+ | |||
}} |
Revision as of 04:44, 14 September 2013
Short description: | p@chr8:23432511..23432524, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:23432511..23432524, + |
Coexpression cluster: | C2010_Whole_blood_Neutrophils_Reticulocytes_Eosinophils_CD14_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.52e-22 | 3 |
erythroid lineage cell | 1.07e-15 | 2 |
erythroblast | 1.07e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 1.07e-15 | 2 |
erythroid progenitor cell | 1.07e-15 | 2 |
reticulocyte | 1.07e-15 | 2 |
proerythroblast | 1.07e-15 | 2 |
basophilic erythroblast | 1.07e-15 | 2 |
polychromatophilic erythroblast | 1.07e-15 | 2 |
orthochromatic erythroblast | 1.07e-15 | 2 |
granulocyte | 1.22e-14 | 8 |
myeloid leukocyte | 1.55e-13 | 72 |
myeloid cell | 3.78e-13 | 108 |
common myeloid progenitor | 3.78e-13 | 108 |
classical monocyte | 1.00e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.00e-11 | 42 |
blood cell | 1.10e-10 | 11 |
myeloid lineage restricted progenitor cell | 1.72e-10 | 66 |
defensive cell | 4.35e-10 | 48 |
phagocyte | 4.35e-10 | 48 |
multinucleate cell | 3.33e-08 | 1 |
myotube | 3.33e-08 | 1 |
hematopoietic oligopotent progenitor cell | 7.77e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.77e-08 | 161 |
monopoietic cell | 8.50e-08 | 59 |
monocyte | 8.50e-08 | 59 |
monoblast | 8.50e-08 | 59 |
promonocyte | 8.50e-08 | 59 |
macrophage dendritic cell progenitor | 1.68e-07 | 61 |
hematopoietic stem cell | 2.19e-07 | 168 |
hematopoietic cell | 7.37e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 4.21e-22 | 15 |
haemolymphatic fluid | 4.21e-22 | 15 |
organism substance | 4.21e-22 | 15 |
hematopoietic system | 1.18e-14 | 98 |
blood island | 1.18e-14 | 98 |
hemolymphoid system | 5.01e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.57e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.