FFCP PHASE1:Hg19::chr7:150721570..150721591,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=285973|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=21899|TSSclassifier=S|UniProt=F5GZS8,F5GWM9,Q674R7|association_with_transcript=0bp_to_ENST00000377974,ENST00000444312,ENST00000466157,ENST00000473409,ENST00000494791,NM_173681,uc011kvc.1_5end|coexpression_cluster_id=C45|description=CAGE_peak_1_at_ATG9B_5end|id=chr7:150721570..150721591,-|ontology_enrichment_celltype=CL:0000066!5.72e-17!254;CL:0002076!7.47e-16!43;CL:0000223!8.94e-14!59;CL:0000039!4.13e-10!7;CL:0000586!4.13e-10!7;CL:0002251!5.62e-09!21|ontology_enrichment_celltype_v019=CL:0000039;3.96e-17;7!CL:0000586;3.96e-17;7!CL:0000349;7.92e-08;19!CL:0002541;1.87e-07;3!CL:0002623;2.77e-07;3|ontology_enrichment_celltype_v019_2=CL:0000039,3.97e-17,7;CL:0000586,3.97e-17,7;CL:0000066,8.09e-10,253;CL:0000349,8.12e-08,19;CL:0002541,1.83e-07,3;CL:0002623,2.60e-07,3|ontology_enrichment_development_v019=UBERON:0009117;2.44e-08;10!UBERON:0005564;2.44e-08;10|ontology_enrichment_disease=DOID:305!1.40e-21!106;DOID:0050687!1.22e-16!143;DOID:299!1.38e-08!25;DOID:162!1.99e-07!235;DOID:14566!2.92e-07!239;DOID:1749!9.78e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,2.30e-11,106;DOID:0050687,3.81e-10,143|ontology_enrichment_uberon=UBERON:0004119!9.07e-12!169;UBERON:0000925!9.07e-12!169;UBERON:0006595!9.07e-12!169;UBERON:0000077!1.62e-11!130;UBERON:0005631!4.72e-11!14;UBERON:0000158!4.72e-11!14;UBERON:0005156!1.73e-10!59;UBERON:0000990!1.73e-10!59;UBERON:0001004!5.81e-10!72;UBERON:0003133!5.97e-10!48;UBERON:0000464!1.42e-09!104;UBERON:0000161!2.94e-09!35;UBERON:0001007!3.48e-09!155;UBERON:0001555!3.48e-09!155;UBERON:0007026!3.48e-09!155;UBERON:0003124!1.59e-08!7;UBERON:0005795!2.95e-08!22;UBERON:0004921!3.11e-08!129;UBERON:0004185!3.11e-08!129;UBERON:0000466!4.89e-08!126;UBERON:0003975!4.98e-08!22;UBERON:0004175!9.63e-08!25;UBERON:0003134!1.82e-07!37;UBERON:0000474!1.82e-07!37;UBERON:0000995!2.05e-07!21;UBERON:0000166!2.16e-07!21;UBERON:0000062!3.59e-07!511;UBERON:0000344!5.04e-07!12;UBERON:0001041!5.47e-07!98;UBERON:0003100!5.77e-07!41|ontology_enrichment_uberon_v019=UBERON:0005631;2.24e-10;10!UBERON:0000158;2.24e-10;10!UBERON:0000478;6.30e-09;24!UBERON:0003124;1.87e-07;3!UBERON:0000920;1.87e-07;3!UBERON:0003135;3.60e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.04e-14,14;UBERON:0000158,3.04e-14,14;UBERON:0003124,4.25e-11,7;UBERON:0000478,6.65e-09,24;UBERON:0002553,3.79e-08,61;UBERON:0003133,4.88e-08,48;UBERON:0005156,1.08e-07,59;UBERON:0000990,1.08e-07,59;UBERON:0000920,1.83e-07,3;UBERON:0003135,3.37e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,3.16520373874144,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0.786728553697808,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,1.23350366406548,1.23882548358041,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,3.27865759463288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95739071387869,0.272746120590835,0.286804595389004,0.487894824518382,0,0.813357600086629,1.96956004529204,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,4.79654910318143,0,1.31700342490351,2.24803506515239,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0.606255142892519,3.32870879020994,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0.200506470303285,12.2467715284742,0,0,0,0.902399225814824,2.15642943892361,0,1.46139224653261,2.11103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,29.4697293312486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,2.68120910214315,1.08890984861323,23.1593749910877,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45175445410452,0,42.0190293138334,2.07875276582847,71.5684435891211,0,0,0,0,0,0,0,0.251932747854276,0,0.246169610922139,0,0.718946809178615,0.895105873378046,0,0.394573622547734,0,0,0,0,0,4.42727193844896,0.61221999997337,0,0.227586896570999,8.64462410995405,1.18193840883968,0,0,0,0,13.7479940032965,0,0,0,0,0,51.5867853830832,4.00141344219745,0,73.3193215954031,20.8237735030671,38.4611696603909,29.0291055356047,2.56473261525214,7.46248686426089,0,0,0,0.22559566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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=285973 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=21899 | |||
|TSSclassifier=S | |||
|UniProt=F5GZS8,F5GWM9,Q674R7 | |||
|association_with_transcript=0bp_to_ENST00000377974,ENST00000444312,ENST00000466157,ENST00000473409,ENST00000494791,NM_173681,uc011kvc.1_5end | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_1_at_ATG9B_5end | |||
|id=chr7:150721570..150721591,- | |||
|ontology_enrichment_celltype=CL:0000066!5.72e-17!254;CL:0002076!7.47e-16!43;CL:0000223!8.94e-14!59;CL:0000039!4.13e-10!7;CL:0000586!4.13e-10!7;CL:0002251!5.62e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.96e-17;7!CL:0000586;3.96e-17;7!CL:0000349;7.92e-08;19!CL:0002541;1.87e-07;3!CL:0002623;2.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.97e-17,7;CL:0000586,3.97e-17,7;CL:0000066,8.09e-10,253;CL:0000349,8.12e-08,19;CL:0002541,1.83e-07,3;CL:0002623,2.60e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.44e-08;10!UBERON:0005564;2.44e-08;10 | |||
|ontology_enrichment_disease=DOID:305!1.40e-21!106;DOID:0050687!1.22e-16!143;DOID:299!1.38e-08!25;DOID:162!1.99e-07!235;DOID:14566!2.92e-07!239;DOID:1749!9.78e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.30e-11,106;DOID:0050687,3.81e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.07e-12!169;UBERON:0000925!9.07e-12!169;UBERON:0006595!9.07e-12!169;UBERON:0000077!1.62e-11!130;UBERON:0005631!4.72e-11!14;UBERON:0000158!4.72e-11!14;UBERON:0005156!1.73e-10!59;UBERON:0000990!1.73e-10!59;UBERON:0001004!5.81e-10!72;UBERON:0003133!5.97e-10!48;UBERON:0000464!1.42e-09!104;UBERON:0000161!2.94e-09!35;UBERON:0001007!3.48e-09!155;UBERON:0001555!3.48e-09!155;UBERON:0007026!3.48e-09!155;UBERON:0003124!1.59e-08!7;UBERON:0005795!2.95e-08!22;UBERON:0004921!3.11e-08!129;UBERON:0004185!3.11e-08!129;UBERON:0000466!4.89e-08!126;UBERON:0003975!4.98e-08!22;UBERON:0004175!9.63e-08!25;UBERON:0003134!1.82e-07!37;UBERON:0000474!1.82e-07!37;UBERON:0000995!2.05e-07!21;UBERON:0000166!2.16e-07!21;UBERON:0000062!3.59e-07!511;UBERON:0000344!5.04e-07!12;UBERON:0001041!5.47e-07!98;UBERON:0003100!5.77e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.24e-10;10!UBERON:0000158;2.24e-10;10!UBERON:0000478;6.30e-09;24!UBERON:0003124;1.87e-07;3!UBERON:0000920;1.87e-07;3!UBERON:0003135;3.60e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.04e-14,14;UBERON:0000158,3.04e-14,14;UBERON:0003124,4.25e-11,7;UBERON:0000478,6.65e-09,24;UBERON:0002553,3.79e-08,61;UBERON:0003133,4.88e-08,48;UBERON:0005156,1.08e-07,59;UBERON:0000990,1.08e-07,59;UBERON:0000920,1.83e-07,3;UBERON:0003135,3.37e-07,11 | |||
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|short_description=p1@ATG9B | |||
}} |
Revision as of 23:59, 13 September 2013
Short description: | p1@ATG9B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ATG9B_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 0bp_to_ENST00000377974, ENST00000444312, ENST00000466157, ENST00000473409, ENST00000494791, NM_173681, uc011kvc.1_5end |
EntrezGene: | ATG9B |
HGNC: | 21899 |
UniProt: | F5GZS8F5GWM9Q674R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.97e-17 | 7 |
germ cell | 3.97e-17 | 7 |
epithelial cell | 8.09e-10 | 253 |
extraembryonic cell | 8.12e-08 | 19 |
chorionic membrane mesenchymal stem cell | 1.83e-07 | 3 |
acinar cell of salivary gland | 2.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.04e-14 | 14 |
membranous layer | 3.04e-14 | 14 |
chorion | 4.25e-11 | 7 |
extraembryonic structure | 6.65e-09 | 24 |
anatomical cavity | 3.79e-08 | 61 |
reproductive organ | 4.88e-08 | 48 |
reproductive structure | 1.08e-07 | 59 |
reproductive system | 1.08e-07 | 59 |
egg chorion | 1.83e-07 | 3 |
male reproductive organ | 3.37e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.30e-11 | 106 |
cell type cancer | 3.81e-10 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.