FFCP PHASE1:Hg19::chr7:143079593..143079616,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7791|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13200|TSSclassifier=W|UniProt=|association_with_transcript=-326bp_to_ENST00000436448_5end|description=CAGE_peak_34_at_ZYX_5end|id=chr7:143079593..143079616,+|ontology_enrichment_celltype=CL:0000048!2.72e-07!430;CL:0000723!7.93e-07!436|ontology_enrichment_celltype_v019=CL:0000235;1.66e-13;6!CL:0002591;1.80e-10;1!CL:0002595;8.03e-08;5|ontology_enrichment_celltype_v019_2=CL:0000235,2.06e-13,6;CL:0002591,1.80e-10,1;CL:0002595,8.04e-08,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;9.36e-13;3!DOID:127;9.36e-13;3!DOID:3371;1.64e-10;1!DOID:4549;1.64e-10;1!DOID:5861;1.64e-10;1!DOID:6496;1.64e-10;1!DOID:0060072;8.62e-10;4|ontology_enrichment_disease_v019_2=DOID:0060084,7.86e-13,3;DOID:127,7.86e-13,3;DOID:3371,1.65e-10,1;DOID:4549,1.65e-10,1;DOID:5861,1.65e-10,1;DOID:6496,1.65e-10,1;DOID:0060072,7.57e-10,4|ontology_enrichment_uberon=UBERON:0002204!1.59e-08!167;UBERON:0001009!6.72e-08!113;UBERON:0004535!8.52e-08!110;UBERON:0000055!4.56e-07!69|ontology_enrichment_uberon_v019=UBERON:0001473;2.88e-10;8!UBERON:0004536;2.88e-10;8!UBERON:0006558;2.88e-10;8!UBERON:0002465;2.59e-08;10!UBERON:0003834;8.03e-08;5!UBERON:0001533;8.03e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.38e-10,8;UBERON:0004536,2.38e-10,8;UBERON:0006558,2.38e-10,8;UBERON:0002465,2.22e-08,10;UBERON:0003834,8.04e-08,5;UBERON:0001533,8.04e-08,5|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0.257575567634187,0.581592955118259,0,0.242584061187816,0.232429036905685,0.822335776043652,0,0.28769239232215,0,0.236482229888585,0,0,0,0.564727018627814,0,0.449446968890169,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.434377689410233,0,0,0,0.422510572623884,0,0,0.112328631146495,0,0.16072558669708,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0,1.29208379584664,1.06729878806013,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0.910161361938026,1.43723628363248,0,0,0.277064115484183,0.438977620880838,0.30648779579902,0,0.340296549480063,0,0.213557388818567,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,1.06502877754984,0.201504196455281,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0.190254152234598,0,0,0,1.63802985597466,1.0404181360211,0.93733833986777,0,0.283550194484773,0,0,0,0.985326475791887,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0.257207374262142,1.41849132023278,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.399891964728228,0,1.00451418286425,0,0,0,0,1.15825045334063,0,0,0,0,0.215627574859517,0,0.254094624222463,0,0,0,0,0.749007023947182,2.99161459204025,0,0.12269149171914,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0.587403472388222,0,0,0.431428401637234,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0,0.710246901252508,0.164254312027618,0,0.348631135379878,0,0,0.0920809889358963,0,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0.62962469366128,0,0,0,0,0.74129687641568,0,0,0,0.190630193923825,2.55897791311334,0.42793898803392,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0.48763373908959,0,1.05650146756755,0,0,4.52032466480971,0.551365343546124,0,1.31535265576129,1.15755106853338,0,0.811641507850816,0.30982349809975,0.563391205064483,0.143411352204052,0.0982490410131212,0.7133421029625,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.31593289814244,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7791 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13200 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-326bp_to_ENST00000436448_5end | |||
|description=CAGE_peak_34_at_ZYX_5end | |||
|id=chr7:143079593..143079616,+ | |||
|ontology_enrichment_celltype=CL:0000048!2.72e-07!430;CL:0000723!7.93e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.66e-13;6!CL:0002591;1.80e-10;1!CL:0002595;8.03e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.06e-13,6;CL:0002591,1.80e-10,1;CL:0002595,8.04e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.36e-13;3!DOID:127;9.36e-13;3!DOID:3371;1.64e-10;1!DOID:4549;1.64e-10;1!DOID:5861;1.64e-10;1!DOID:6496;1.64e-10;1!DOID:0060072;8.62e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.86e-13,3;DOID:127,7.86e-13,3;DOID:3371,1.65e-10,1;DOID:4549,1.65e-10,1;DOID:5861,1.65e-10,1;DOID:6496,1.65e-10,1;DOID:0060072,7.57e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.59e-08!167;UBERON:0001009!6.72e-08!113;UBERON:0004535!8.52e-08!110;UBERON:0000055!4.56e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.88e-10;8!UBERON:0004536;2.88e-10;8!UBERON:0006558;2.88e-10;8!UBERON:0002465;2.59e-08;10!UBERON:0003834;8.03e-08;5!UBERON:0001533;8.03e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.38e-10,8;UBERON:0004536,2.38e-10,8;UBERON:0006558,2.38e-10,8;UBERON:0002465,2.22e-08,10;UBERON:0003834,8.04e-08,5;UBERON:0001533,8.04e-08,5 | |||
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|short_description=p34@ZYX | |||
}} |
Revision as of 23:46, 13 September 2013
Short description: | p34@ZYX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_34_at_ZYX_5end |
Coexpression cluster: | NA |
Association with transcript: | -326bp_to_ENST00000436448_5end |
EntrezGene: | ZYX |
HGNC: | 13200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.06e-13 | 6 |
smooth muscle cell of the pulmonary artery | 1.80e-10 | 1 |
smooth muscle cell of the subclavian artery | 8.04e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 2.38e-10 | 8 |
lymph vasculature | 2.38e-10 | 8 |
lymphatic part of lymphoid system | 2.38e-10 | 8 |
lymphoid system | 2.22e-08 | 10 |
thoracic segment blood vessel | 8.04e-08 | 5 |
subclavian artery | 8.04e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.86e-13 | 3 |
leiomyoma | 7.86e-13 | 3 |
chondrosarcoma | 1.65e-10 | 1 |
extraosseous chondrosarcoma | 1.65e-10 | 1 |
myxoid chondrosarcoma | 1.65e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 1.65e-10 | 1 |
benign neoplasm | 7.57e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.