FFCP PHASE1:Hg19::chr7:141695649..141695660,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8972|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7043|TSSclassifier=S|UniProt=|association_with_transcript=11bp_to_ENST00000549489_5end|coexpression_cluster_id=C39|description=CAGE_peak_3_at_MGAM_5end|id=chr7:141695649..141695660,+|ontology_enrichment_celltype=CL:0002535!1.87e-07!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;5.48e-18;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006947!2.09e-38!3;UBERON:0004054!2.09e-38!3;UBERON:0005904!5.30e-29!4;UBERON:0003135!1.55e-28!11;UBERON:0003101!3.56e-20!22;UBERON:0000079!3.56e-20!22;UBERON:0000473!1.16e-14!8;UBERON:0001301!3.08e-14!1;UBERON:0001000!4.53e-14!1;UBERON:0005352!4.53e-14!1;UBERON:0000998!9.73e-14!1;UBERON:0006868!9.73e-14!1;UBERON:0005156!8.41e-10!59;UBERON:0000990!8.41e-10!59;UBERON:0003133!4.37e-09!48;UBERON:0004175!2.72e-08!25;UBERON:0007023!7.80e-08!115;UBERON:0002113!1.21e-07!27;UBERON:0003918!1.21e-07!27;UBERON:0005095!1.21e-07!27;UBERON:0007687!1.21e-07!27;UBERON:0006955!1.87e-07!2;UBERON:0004801!1.87e-07!2;UBERON:0006554!5.27e-07!44;UBERON:0001008!7.59e-07!45|ontology_enrichment_uberon_v019=UBERON:0006947;7.81e-45;3!UBERON:0004054;7.81e-45;3!UBERON:0001301;1.84e-34;1!UBERON:0001000;5.05e-34;1!UBERON:0005352;5.05e-34;1!UBERON:0005904;5.98e-34;4!UBERON:0003135;1.17e-27;11!UBERON:0000058;2.84e-14;10!UBERON:0003101;2.85e-14;22!UBERON:0000079;2.85e-14;22!UBERON:0000160;2.25e-08;17!UBERON:0002108;5.73e-08;4!UBERON:0004175;2.60e-07;21!UBERON:0005409;9.39e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.81e-45,3;UBERON:0004054,7.81e-45,3;UBERON:0001301,1.84e-34,1;UBERON:0001000,5.05e-34,1;UBERON:0005352,5.05e-34,1;UBERON:0005904,5.98e-34,4;UBERON:0003135,1.17e-27,11;UBERON:0003101,2.85e-14,22;UBERON:0000079,2.85e-14,22;UBERON:0000160,2.25e-08,17;UBERON:0000058,5.54e-08,19;UBERON:0002108,5.73e-08,4;UBERON:0007023,1.08e-07,114;UBERON:0003133,6.25e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.01511438622706,0,0,0,0,0,0,0,0,0,0,4.73501283419269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.9859135586103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37275998289572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2739551945665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534434810531121,0,0,3.18270532516606,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@MGAM}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8972 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7043 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=11bp_to_ENST00000549489_5end | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_3_at_MGAM_5end | |||
|id=chr7:141695649..141695660,+ | |||
|ontology_enrichment_celltype=CL:0002535!1.87e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.48e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.09e-38!3;UBERON:0004054!2.09e-38!3;UBERON:0005904!5.30e-29!4;UBERON:0003135!1.55e-28!11;UBERON:0003101!3.56e-20!22;UBERON:0000079!3.56e-20!22;UBERON:0000473!1.16e-14!8;UBERON:0001301!3.08e-14!1;UBERON:0001000!4.53e-14!1;UBERON:0005352!4.53e-14!1;UBERON:0000998!9.73e-14!1;UBERON:0006868!9.73e-14!1;UBERON:0005156!8.41e-10!59;UBERON:0000990!8.41e-10!59;UBERON:0003133!4.37e-09!48;UBERON:0004175!2.72e-08!25;UBERON:0007023!7.80e-08!115;UBERON:0002113!1.21e-07!27;UBERON:0003918!1.21e-07!27;UBERON:0005095!1.21e-07!27;UBERON:0007687!1.21e-07!27;UBERON:0006955!1.87e-07!2;UBERON:0004801!1.87e-07!2;UBERON:0006554!5.27e-07!44;UBERON:0001008!7.59e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.81e-45;3!UBERON:0004054;7.81e-45;3!UBERON:0001301;1.84e-34;1!UBERON:0001000;5.05e-34;1!UBERON:0005352;5.05e-34;1!UBERON:0005904;5.98e-34;4!UBERON:0003135;1.17e-27;11!UBERON:0000058;2.84e-14;10!UBERON:0003101;2.85e-14;22!UBERON:0000079;2.85e-14;22!UBERON:0000160;2.25e-08;17!UBERON:0002108;5.73e-08;4!UBERON:0004175;2.60e-07;21!UBERON:0005409;9.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.81e-45,3;UBERON:0004054,7.81e-45,3;UBERON:0001301,1.84e-34,1;UBERON:0001000,5.05e-34,1;UBERON:0005352,5.05e-34,1;UBERON:0005904,5.98e-34,4;UBERON:0003135,1.17e-27,11;UBERON:0003101,2.85e-14,22;UBERON:0000079,2.85e-14,22;UBERON:0000160,2.25e-08,17;UBERON:0000058,5.54e-08,19;UBERON:0002108,5.73e-08,4;UBERON:0007023,1.08e-07,114;UBERON:0003133,6.25e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.01511438622706,0,0,0,0,0,0,0,0,0,0,4.73501283419269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.9859135586103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37275998289572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2739551945665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534434810531121,0,0,3.18270532516606,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@MGAM | |||
}} |
Revision as of 23:37, 13 September 2013
Short description: | p3@MGAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MGAM_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 11bp_to_ENST00000549489_5end |
EntrezGene: | MGAM |
HGNC: | 7043 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 7.81e-45 | 3 |
internal male genitalia | 7.81e-45 | 3 |
epididymis | 1.84e-34 | 1 |
vas deferens | 5.05e-34 | 1 |
spermatic cord | 5.05e-34 | 1 |
duct of male reproductive system | 5.98e-34 | 4 |
male reproductive organ | 1.17e-27 | 11 |
male organism | 2.85e-14 | 22 |
male reproductive system | 2.85e-14 | 22 |
intestine | 2.25e-08 | 17 |
duct | 5.54e-08 | 19 |
small intestine | 5.73e-08 | 4 |
adult organism | 1.08e-07 | 114 |
reproductive organ | 6.25e-07 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.