FFCP PHASE1:Hg19::chr7:129015616..129015619,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23382|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=22204|TSSclassifier=S|UniProt=C9K0S0|association_with_transcript=-58bp_to_ENST00000466993_5end|coexpression_cluster_id=C160|description=CAGE_peak_38_at_AHCYL2_5end|id=chr7:129015616..129015619,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001896!2.30e-30!3;UBERON:0005290!2.30e-30!3;UBERON:0010096!2.30e-30!3;UBERON:0002336!3.28e-23!1;UBERON:0001018!3.28e-23!1;UBERON:0002473!3.28e-23!1;UBERON:0005340!3.28e-23!1;UBERON:0002316!3.28e-23!1;UBERON:0003544!3.28e-23!1;UBERON:0001020!3.28e-23!1;UBERON:0005970!3.28e-23!1;UBERON:0002437!3.28e-23!1;UBERON:0002581!5.13e-23!1;UBERON:0001882!6.40e-23!1;UBERON:0005403!6.40e-23!1;UBERON:0000349!1.93e-18!5;UBERON:0003075!5.33e-16!86;UBERON:0007284!5.33e-16!86;UBERON:0005743!8.13e-16!86;UBERON:0002346!2.73e-15!90;UBERON:0000073!2.47e-14!94;UBERON:0001016!2.47e-14!94;UBERON:0001049!1.25e-13!57;UBERON:0005068!1.25e-13!57;UBERON:0006241!1.25e-13!57;UBERON:0007135!1.25e-13!57;UBERON:0002616!3.54e-13!59;UBERON:0001017!1.03e-12!82;UBERON:0002360!1.65e-12!2;UBERON:0000094!1.65e-12!2;UBERON:0007645!1.65e-12!2;UBERON:0001954!2.32e-12!2;UBERON:0003022!2.32e-12!2;UBERON:0002421!2.32e-12!2;UBERON:0002600!2.32e-12!2;UBERON:0005162!2.59e-12!2;UBERON:0000122!2.59e-12!2;UBERON:0007023!4.65e-12!115;UBERON:0002298!4.67e-12!8;UBERON:0000955!3.88e-11!69;UBERON:0006238!3.88e-11!69;UBERON:0002791!1.08e-10!33;UBERON:0001893!2.13e-10!34;UBERON:0003056!5.06e-09!61;UBERON:0002780!1.00e-08!41;UBERON:0001890!1.00e-08!41;UBERON:0006240!1.00e-08!41;UBERON:0003080!1.57e-08!42;UBERON:0000033!1.75e-08!123;UBERON:0004733!2.37e-08!12;UBERON:0002028!2.37e-08!12;UBERON:0007277!2.37e-08!12;UBERON:0000153!4.39e-08!129;UBERON:0007811!4.39e-08!129;UBERON:0004121!5.72e-08!169;UBERON:0000924!8.83e-08!173;UBERON:0006601!8.83e-08!173;UBERON:0004732!8.89e-08!13;UBERON:0003076!7.41e-07!15;UBERON:0003057!7.41e-07!15|ontology_enrichment_uberon_v019=UBERON:0001896;2.39e-66;3!UBERON:0005290;2.39e-66;3!UBERON:0002298;4.27e-34;6!UBERON:0004733;6.76e-18;12!UBERON:0002028;6.76e-18;12!UBERON:0004732;1.21e-16;13|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.39e-66,3;UBERON:0005290,2.39e-66,3;UBERON:0010096,2.39e-66,3;UBERON:0002298,4.27e-34,6;UBERON:0004733,6.76e-18,12;UBERON:0002028,6.76e-18,12;UBERON:0007277,6.76e-18,12;UBERON:0004732,1.21e-16,13;UBERON:0003076,1.22e-14,15;UBERON:0003057,1.22e-14,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44207766997908,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p38@AHCYL2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23382 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22204 | |||
|TSSclassifier=S | |||
|UniProt=C9K0S0 | |||
|association_with_transcript=-58bp_to_ENST00000466993_5end | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_38_at_AHCYL2_5end | |||
|id=chr7:129015616..129015619,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001896;2.39e-66;3!UBERON:0005290;2.39e-66;3!UBERON:0002298;4.27e-34;6!UBERON:0004733;6.76e-18;12!UBERON:0002028;6.76e-18;12!UBERON:0004732;1.21e-16;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.39e-66,3;UBERON:0005290,2.39e-66,3;UBERON:0010096,2.39e-66,3;UBERON:0002298,4.27e-34,6;UBERON:0004733,6.76e-18,12;UBERON:0002028,6.76e-18,12;UBERON:0007277,6.76e-18,12;UBERON:0004732,1.21e-16,13;UBERON:0003076,1.22e-14,15;UBERON:0003057,1.22e-14,15 | |||
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|short_description=p38@AHCYL2 | |||
}} |
Revision as of 23:09, 13 September 2013
Short description: | p38@AHCYL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_38_at_AHCYL2_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | -58bp_to_ENST00000466993_5end |
EntrezGene: | AHCYL2 |
HGNC: | 22204 |
UniProt: | C9K0S0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.39e-66 | 3 |
myelencephalon | 2.39e-66 | 3 |
future myelencephalon | 2.39e-66 | 3 |
brainstem | 4.27e-34 | 6 |
segmental subdivision of hindbrain | 6.76e-18 | 12 |
hindbrain | 6.76e-18 | 12 |
presumptive hindbrain | 6.76e-18 | 12 |
segmental subdivision of nervous system | 1.21e-16 | 13 |
posterior neural tube | 1.22e-14 | 15 |
chordal neural plate | 1.22e-14 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.