FFCP PHASE1:Hg19::chr7:116199577..116199596,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=857|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=1527|TSSclassifier=N|UniProt=|association_with_transcript=-321bp_to_AF070648_5end|description=CAGE_peak_21_at_CAV1_5end|id=chr7:116199577..116199596,+|ontology_enrichment_celltype=CL:0000057!2.91e-13!75;CL:0000055!9.08e-13!180;CL:0002620!5.78e-11!23;CL:0000220!3.73e-10!246;CL:0002321!8.48e-10!248;CL:0000222!2.98e-09!119;CL:0002139!2.70e-07!24|ontology_enrichment_celltype_v019=CL:0000056;4.60e-10;4!CL:0000515;4.24e-08;3!CL:0002138;4.78e-07;6!CL:0002620;6.24e-07;23|ontology_enrichment_celltype_v019_2=CL:0000515,9.70e-10,4;CL:0005020,2.96e-07,6;CL:0002138,2.96e-07,6;CL:0005022,2.96e-07,6;CL:0002620,9.81e-07,23|ontology_enrichment_development_v019=CL:0000515;4.60e-10;4!CL:0005022;4.78e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;1.28e-07;5!DOID:450;1.28e-07;5!DOID:66;1.28e-07;5!DOID:423;1.28e-07;5!DOID:0080000;1.28e-07;5!DOID:11722;1.28e-07;5|ontology_enrichment_disease_v019_2=DOID:17,2.15e-07,5;DOID:450,2.15e-07,5;DOID:66,2.15e-07,5;DOID:423,2.15e-07,5;DOID:0080000,2.15e-07,5;DOID:11722,2.15e-07,5|ontology_enrichment_uberon=UBERON:0003102!3.08e-14!95;UBERON:0002199!1.79e-10!45;UBERON:0002416!1.79e-10!45;UBERON:0002097!4.82e-10!40;UBERON:0000914!7.22e-08!83;UBERON:0002329!7.22e-08!83;UBERON:0003077!7.22e-08!83;UBERON:0003059!7.22e-08!83;UBERON:0007282!7.22e-08!83;UBERON:0009618!7.22e-08!83;UBERON:0007285!7.22e-08!83;UBERON:0002049!1.27e-07!79;UBERON:0007798!1.27e-07!79;UBERON:0004923!5.26e-07!57;UBERON:0000486!5.67e-07!82;UBERON:0000055!5.77e-07!69|ontology_enrichment_uberon_v019=UBERON:0002097;8.79e-09;41!UBERON:0002199;4.47e-07;46!UBERON:0002416;4.47e-07;46|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.35e-09,41;UBERON:0002199,1.62e-09,46;UBERON:0002416,1.62e-09,46;UBERON:0003102,1.68e-07,99|phase1_expression=0.363356758541113,1.92690471501885,0.281908808191942,0,0.446961094427288,0,0,0,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0.37129905888014,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0,0,0,0.136874425072884,0.376627918784408,0.152826811495903,0,0,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.80719576192283,0,0.869079113764942,0,0,0.661743720148475,0.221729397462564,0.351339142772504,0.196468613246569,0,1.11235332835329,0,0,0,0,0,0,0,0.860234595106124,0.694281003215189,0,0,0.825354125820202,0.208994966536811,0.258416759169329,1.77883131343355,3.01248551488203,2.01414658554573,0.760272105718513,1.70843440283719,2.20597848207521,0,0.625098097988558,0.44905874525234,1.12611480483322,0,0.949265659568129,0.916008719652036,0,0,0,0,0.506522046658319,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0,0.311211035399766,0,0.653847612453835,0,0.576175924479999,0,0.936480230490962,0.570471821544449,2.24173020827702,0.469737994575059,2.10434827678571,2.10676210053373,0.408308342509787,0.122834317311768,0.413303124703062,1.18800285728205,0.247266929278557,0,0.718618141816238,0.336672227908132,0.250237039743928,0.554128230968366,0,0.30648779579902,0.150238058906597,0.113432183160021,0.89694817844431,1.06778694409284,1.69545520927649,1.20036438433761,1.13357782162283,0.515281080091258,1.11670113798954,0.675105328965065,0.389748020644795,0.757301322732344,0.276149695926898,0.323292113637624,0.710019185033229,1.20902517873168,0.847802961552438,0.193260853163297,0.272746120590835,0.860413786167011,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0,2.16563844500876,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,1.4763109092493,0,0,0,0,0,0,0,0,0.857839051492628,1.64625428112938,0,0.904760751704678,0.833296006426766,0.325808305310325,1.03993478527958,0,0.231860809950154,0.117408694235822,0.577465791044295,3.70388410061289,1.52203321787679,0,0,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,0.53735113621709,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0,0.66004457238855,0,0,2.535908257668,0,2.08014873822732,0,1.41849132023278,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0.718874566474748,0,1.42636905040718,1.15825045334063,3.49309748335652,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,1.45579603071565,5.17444067511769,1.10391690523754,1.17141414992713,0.601892199455438,0,0,1.99267679560631,0.921845842708516,0.260650843404249,0,0,0,0,0,0,0,1.20956117331872,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.804269605718038,0,2.00472601943452,0.887808626565635,1.14978018419333,0.519254429183621,1.51073491997947,0,2.00506470303285,0,0.114814448164607,1.0925470080403,0,0,0,0.784349769176855,0,0,0,0.850468526382578,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1527 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-321bp_to_AF070648_5end | |||
|description=CAGE_peak_21_at_CAV1_5end | |||
|id=chr7:116199577..116199596,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.91e-13!75;CL:0000055!9.08e-13!180;CL:0002620!5.78e-11!23;CL:0000220!3.73e-10!246;CL:0002321!8.48e-10!248;CL:0000222!2.98e-09!119;CL:0002139!2.70e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000056;4.60e-10;4!CL:0000515;4.24e-08;3!CL:0002138;4.78e-07;6!CL:0002620;6.24e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,9.70e-10,4;CL:0005020,2.96e-07,6;CL:0002138,2.96e-07,6;CL:0005022,2.96e-07,6;CL:0002620,9.81e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000515;4.60e-10;4!CL:0005022;4.78e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.28e-07;5!DOID:450;1.28e-07;5!DOID:66;1.28e-07;5!DOID:423;1.28e-07;5!DOID:0080000;1.28e-07;5!DOID:11722;1.28e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.15e-07,5;DOID:450,2.15e-07,5;DOID:66,2.15e-07,5;DOID:423,2.15e-07,5;DOID:0080000,2.15e-07,5;DOID:11722,2.15e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.08e-14!95;UBERON:0002199!1.79e-10!45;UBERON:0002416!1.79e-10!45;UBERON:0002097!4.82e-10!40;UBERON:0000914!7.22e-08!83;UBERON:0002329!7.22e-08!83;UBERON:0003077!7.22e-08!83;UBERON:0003059!7.22e-08!83;UBERON:0007282!7.22e-08!83;UBERON:0009618!7.22e-08!83;UBERON:0007285!7.22e-08!83;UBERON:0002049!1.27e-07!79;UBERON:0007798!1.27e-07!79;UBERON:0004923!5.26e-07!57;UBERON:0000486!5.67e-07!82;UBERON:0000055!5.77e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.79e-09;41!UBERON:0002199;4.47e-07;46!UBERON:0002416;4.47e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.35e-09,41;UBERON:0002199,1.62e-09,46;UBERON:0002416,1.62e-09,46;UBERON:0003102,1.68e-07,99 | |||
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| |||
|short_description=p21@CAV1 | |||
}} |
Revision as of 22:51, 13 September 2013
Short description: | p21@CAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_CAV1_5end |
Coexpression cluster: | NA |
Association with transcript: | -321bp_to_AF070648_5end |
EntrezGene: | CAV1 |
HGNC: | 1527 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 9.70e-10 | 4 |
lymphangioblast | 2.96e-07 | 6 |
endothelial cell of lymphatic vessel | 2.96e-07 | 6 |
vascular lymphangioblast | 2.96e-07 | 6 |
skin fibroblast | 9.81e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.35e-09 | 41 |
integument | 1.62e-09 | 46 |
integumental system | 1.62e-09 | 46 |
surface structure | 1.68e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.15e-07 | 5 |
myotonic disease | 2.15e-07 | 5 |
muscle tissue disease | 2.15e-07 | 5 |
myopathy | 2.15e-07 | 5 |
muscular disease | 2.15e-07 | 5 |
myotonic dystrophy | 2.15e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.