FFCP PHASE1:Hg19::chr7:45956931..45956944,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C223|description=CAGE_peak_at_chr7:45956931..45956944,+|id=chr7:45956931..45956944,+|ontology_enrichment_celltype=CL:0002620!1.48e-10!23;CL:0000057!1.49e-10!75;CL:0000055!4.35e-10!180;CL:0000153!5.47e-07!9;CL:0000447!5.47e-07!9|ontology_enrichment_celltype_v019=CL:0002620;1.18e-19;23!CL:0000138;1.04e-13;6!CL:0000153;1.32e-12;9!CL:0000447;1.32e-12;9!CL:0000327;1.02e-09;15!CL:0002579;2.79e-09;3!CL:0000499;1.32e-07;28!CL:0002589;5.81e-07;2|ontology_enrichment_celltype_v019_2=CL:0002620,1.49e-19,23;CL:0000058,1.02e-13,6;CL:0000138,1.02e-13,6;CL:0000057,3.38e-13,76;CL:0000153,1.39e-12,9;CL:0000447,1.39e-12,9;CL:0000327,1.06e-09,15;CL:0002579,4.97e-09,3;CL:0000499,1.34e-07,28;CL:0002589,4.59e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!3.49e-07!5;DOID:450!3.49e-07!5;DOID:66!3.49e-07!5;DOID:423!3.49e-07!5;DOID:0080000!3.49e-07!5;DOID:11722!3.49e-07!5|ontology_enrichment_disease_v019=DOID:17;2.06e-15;5!DOID:450;2.06e-15;5!DOID:66;2.06e-15;5!DOID:423;2.06e-15;5!DOID:0080000;2.06e-15;5!DOID:11722;2.06e-15;5!DOID:3350;5.81e-07;2|ontology_enrichment_disease_v019_2=DOID:17,2.24e-15,5;DOID:450,2.24e-15,5;DOID:66,2.24e-15,5;DOID:423,2.24e-15,5;DOID:0080000,2.24e-15,5;DOID:11722,2.24e-15,5;DOID:3350,6.57e-07,2|ontology_enrichment_uberon=UBERON:0005631!7.36e-08!14;UBERON:0000158!7.36e-08!14;UBERON:0003688!1.36e-07!6;UBERON:0002358!1.36e-07!6;UBERON:0003684!1.36e-07!6;UBERON:0001178!1.36e-07!6;UBERON:0004457!6.17e-07!12;UBERON:0000042!6.17e-07!12|ontology_enrichment_uberon_v019=UBERON:0003688;6.53e-12;6!UBERON:0002358;6.53e-12;6!UBERON:0003684;6.53e-12;6!UBERON:0001178;6.53e-12;6!UBERON:0004457;3.41e-11;9!UBERON:0000042;3.41e-11;9!UBERON:0002097;3.38e-10;41!UBERON:0002199;2.28e-08;46!UBERON:0002416;2.28e-08;46!UBERON:0001529;5.81e-07;2!UBERON:0007204;5.81e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.63e-13,41;UBERON:0003688,8.23e-12,6;UBERON:0002358,8.23e-12,6;UBERON:0003684,8.23e-12,6;UBERON:0001178,8.23e-12,6;UBERON:0002199,2.47e-11,46;UBERON:0002416,2.47e-11,46;UBERON:0004457,3.84e-08,12;UBERON:0000042,3.84e-08,12;UBERON:0001529,4.59e-07,2;UBERON:0007204,4.59e-07,2|phase1_expression=1.2717486548939,0.428201047781966,1.83240725324762,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79007586580942,48.7942855719164,29.0775988168816,20.1336661355545,2.3858578411533,18.4921250715002,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,0,0,0.354668382198357,0.560677600142307,1.06748995729705,0.74000264525148,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,2.87023417102179,3.41691822109708,5.29829752898905,4.80145753735044,1.23663035086127,2.31876486041066,6.14185625894246,2.19409231913646,0.876933046450788,3.28163906517349,4.97069452668416,0.161646056818812,3.90510551768276,2.41805035746337,1.01736355386293,0,0,0,0,0,0,0.10366105501537,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,1.44781306667579,0.410952645100767,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.87173775377726,0.892144943985809,1.26161932027148,0.468565659970853,0,0,0,0,0.553107505625109,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,2.11673205330776,0.744323423456331,1.53461973288062,1.68396056659844,1.40953064181271,3.07024349440022,1.12597744800525,0,0,0.532685175939381,0.328508624055237,0,0.348631135379878,0,0.200506470303285,0,0.114814448164607,0,0.262248829918848,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0.509752546090077,0,0.447749509444357,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,1.25924938732256,0.6970372701606,0,0,0,4.26245703939016,1.71749864090389,0,0.632758849437452,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0,0,0,1.65409603063837,3.3171948762061,5.26141062304515,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0,3.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_at_chr7:45956931..45956944,+ | |||
|id=chr7:45956931..45956944,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.48e-10!23;CL:0000057!1.49e-10!75;CL:0000055!4.35e-10!180;CL:0000153!5.47e-07!9;CL:0000447!5.47e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.18e-19;23!CL:0000138;1.04e-13;6!CL:0000153;1.32e-12;9!CL:0000447;1.32e-12;9!CL:0000327;1.02e-09;15!CL:0002579;2.79e-09;3!CL:0000499;1.32e-07;28!CL:0002589;5.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.49e-19,23;CL:0000058,1.02e-13,6;CL:0000138,1.02e-13,6;CL:0000057,3.38e-13,76;CL:0000153,1.39e-12,9;CL:0000447,1.39e-12,9;CL:0000327,1.06e-09,15;CL:0002579,4.97e-09,3;CL:0000499,1.34e-07,28;CL:0002589,4.59e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.49e-07!5;DOID:450!3.49e-07!5;DOID:66!3.49e-07!5;DOID:423!3.49e-07!5;DOID:0080000!3.49e-07!5;DOID:11722!3.49e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.06e-15;5!DOID:450;2.06e-15;5!DOID:66;2.06e-15;5!DOID:423;2.06e-15;5!DOID:0080000;2.06e-15;5!DOID:11722;2.06e-15;5!DOID:3350;5.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.24e-15,5;DOID:450,2.24e-15,5;DOID:66,2.24e-15,5;DOID:423,2.24e-15,5;DOID:0080000,2.24e-15,5;DOID:11722,2.24e-15,5;DOID:3350,6.57e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.36e-08!14;UBERON:0000158!7.36e-08!14;UBERON:0003688!1.36e-07!6;UBERON:0002358!1.36e-07!6;UBERON:0003684!1.36e-07!6;UBERON:0001178!1.36e-07!6;UBERON:0004457!6.17e-07!12;UBERON:0000042!6.17e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.53e-12;6!UBERON:0002358;6.53e-12;6!UBERON:0003684;6.53e-12;6!UBERON:0001178;6.53e-12;6!UBERON:0004457;3.41e-11;9!UBERON:0000042;3.41e-11;9!UBERON:0002097;3.38e-10;41!UBERON:0002199;2.28e-08;46!UBERON:0002416;2.28e-08;46!UBERON:0001529;5.81e-07;2!UBERON:0007204;5.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.63e-13,41;UBERON:0003688,8.23e-12,6;UBERON:0002358,8.23e-12,6;UBERON:0003684,8.23e-12,6;UBERON:0001178,8.23e-12,6;UBERON:0002199,2.47e-11,46;UBERON:0002416,2.47e-11,46;UBERON:0004457,3.84e-08,12;UBERON:0000042,3.84e-08,12;UBERON:0001529,4.59e-07,2;UBERON:0007204,4.59e-07,2 | |||
|phase1_expression=1.2717486548939,0.428201047781966,1.83240725324762,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79007586580942,48.7942855719164,29.0775988168816,20.1336661355545,2.3858578411533,18.4921250715002,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,0,0,0.354668382198357,0.560677600142307,1.06748995729705,0.74000264525148,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,2.87023417102179,3.41691822109708,5.29829752898905,4.80145753735044,1.23663035086127,2.31876486041066,6.14185625894246,2.19409231913646,0.876933046450788,3.28163906517349,4.97069452668416,0.161646056818812,3.90510551768276,2.41805035746337,1.01736355386293,0,0,0,0,0,0,0.10366105501537,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,1.44781306667579,0.410952645100767,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.87173775377726,0.892144943985809,1.26161932027148,0.468565659970853,0,0,0,0,0.553107505625109,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,2.11673205330776,0.744323423456331,1.53461973288062,1.68396056659844,1.40953064181271,3.07024349440022,1.12597744800525,0,0,0.532685175939381,0.328508624055237,0,0.348631135379878,0,0.200506470303285,0,0.114814448164607,0,0.262248829918848,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0.509752546090077,0,0.447749509444357,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,1.25924938732256,0.6970372701606,0,0,0,4.26245703939016,1.71749864090389,0,0.632758849437452,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0,0,0,1.65409603063837,3.3171948762061,5.26141062304515,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0,3.16661452946496,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53614521001611,3.8605408508243,0.307160702099232,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,12.4415835064723,0.0898683511473268,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0.110579259931225,0,0,0,0.41827123283581,0.153900517007594,0,0,0,0,4.14701507651495,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,1.37588825977293,0,0,0,0,0,0,0,0,0,0,0,0,1.79828648623917,0,0,0,0,0,0,0,0.104602846312333,0.917983958726896,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,4.32359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0.537862017998534,0,0,0,0.5085370753095,1.08599920350743,0,0.326587360109409,0,0,0,0,0.146552233678082,1.32506888912221,0,0.13223260174269,0.855434189421647,1.40963004463334,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.757612021100357,1.76097531226803,0.889811221596536,0,0.604923695052956,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,1.14241563650639,0,0.181848659202559,0,0,1.19428766609585,0,0.686791410365586,0.673498977531838,0,0,0,0.260994291965212,0.453411851024545,0,0,1.61179956973339,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693153996902029,0,0,0,0.225630985047772,0.40341013740704,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,1.27762427639595,0,0,0,0,1.5966426629275,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0.280272163313789,0,3.88669664193519,5.25526856675755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,5.09781344063451,0,0.322289439867886,0,1.78553938605658,0,0.240724100067505,0,0,0,0,0,0,0,0.743990036333503,3.23522940041993,2.59575937274273,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0.112131862580613,0.12729431655633,0.404234377916439,0,1.02669990325584,0,0.143444410785353,0,0,0.320182037633146,0,0.628776414746108,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr7:45956931..45956944,+ | |||
}} |
Revision as of 01:25, 14 September 2013
Short description: | p@chr7:45956931..45956944, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:45956931..45956944, + |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.49e-19 | 23 |
chondroblast | 1.02e-13 | 6 |
chondrocyte | 1.02e-13 | 6 |
fibroblast | 3.38e-13 | 76 |
GAG secreting cell | 1.39e-12 | 9 |
carbohydrate secreting cell | 1.39e-12 | 9 |
extracellular matrix secreting cell | 1.06e-09 | 15 |
omentum preadipocyte | 4.97e-09 | 3 |
stromal cell | 1.34e-07 | 28 |
smooth muscle cell of the brachiocephalic vasculature | 4.59e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.63e-13 | 41 |
omentum | 8.23e-12 | 6 |
peritoneum | 8.23e-12 | 6 |
abdominal cavity | 8.23e-12 | 6 |
visceral peritoneum | 8.23e-12 | 6 |
integument | 2.47e-11 | 46 |
integumental system | 2.47e-11 | 46 |
cavity lining | 3.84e-08 | 12 |
serous membrane | 3.84e-08 | 12 |
brachiocephalic artery | 4.59e-07 | 2 |
brachiocephalic vasculature | 4.59e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.24e-15 | 5 |
myotonic disease | 2.24e-15 | 5 |
muscle tissue disease | 2.24e-15 | 5 |
myopathy | 2.24e-15 | 5 |
muscular disease | 2.24e-15 | 5 |
myotonic dystrophy | 2.24e-15 | 5 |
mesenchymal cell neoplasm | 6.57e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.