FFCP PHASE1:Hg19::chr7:22702932..22702943,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr7:22702932..22702943,-|id=chr7:22702932..22702943,-|ontology_enrichment_celltype=CL:0002057!6.54e-32!42;CL:0000860!1.60e-29!45;CL:0002194!3.82e-22!63;CL:0000576!3.82e-22!63;CL:0000040!3.82e-22!63;CL:0000559!3.82e-22!63;CL:0002009!2.39e-21!65;CL:0000839!1.48e-19!70;CL:0000557!3.16e-19!71;CL:0000766!1.03e-17!76;CL:0000359!7.01e-14!32;CL:0002596!1.79e-11!2;CL:0002087!3.37e-11!119;CL:0002589!5.26e-11!2;CL:0000763!8.68e-11!112;CL:0000049!8.68e-11!112;CL:0002031!1.39e-10!124;CL:0000192!3.85e-10!42;CL:0000514!3.85e-10!42;CL:0000738!6.47e-09!140;CL:0000187!1.72e-07!54;CL:0000048!1.78e-07!430;CL:0000723!2.83e-07!436;CL:0000034!5.17e-07!444;CL:0000680!5.25e-07!57;CL:0000056!5.25e-07!57;CL:0000355!5.25e-07!57;CL:0002032!5.74e-07!165;CL:0000837!5.74e-07!165|ontology_enrichment_celltype_v019=CL:0000860;2.17e-33;33!CL:0002057;2.17e-33;33!CL:0000473;7.68e-23;39!CL:0000234;7.68e-23;39!CL:0000576;8.30e-18;48!CL:0000766;6.14e-10;69!CL:0002589;7.79e-09;2!CL:0002596;7.79e-09;2!CL:0002087;9.87e-09;104!CL:0000763;1.49e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,1.91e-35,42;CL:0002057,1.91e-35,42;CL:0000473,6.35e-31,48;CL:0000234,6.35e-31,48;CL:0002194,1.38e-24,59;CL:0000576,1.38e-24,59;CL:0000040,1.38e-24,59;CL:0000559,1.38e-24,59;CL:0002009,9.10e-24,61;CL:0000839,6.21e-22,66;CL:0000557,1.34e-21,67;CL:0000766,4.61e-20,72;CL:0000763,3.83e-13,108;CL:0000049,3.83e-13,108;CL:0002087,2.71e-12,115;CL:0002031,9.57e-12,120;CL:0000738,2.93e-10,136;CL:0002596,7.49e-09,2;CL:0002589,8.09e-09,2;CL:0002032,1.61e-08,161;CL:0000837,1.61e-08,161;CL:0000037,4.01e-08,168;CL:0000988,1.17e-07,177|ontology_enrichment_development_v019=CL:0002057;9.91e-23;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!7.75e-18!167;UBERON:0002371!1.23e-16!80;UBERON:0001474!3.30e-15!86;UBERON:0003081!6.10e-15!216;UBERON:0001637!1.51e-12!42;UBERON:0003509!1.51e-12!42;UBERON:0004572!1.51e-12!42;UBERON:0004765!2.22e-12!101;UBERON:0001434!2.22e-12!101;UBERON:0002390!3.20e-12!102;UBERON:0003061!3.20e-12!102;UBERON:0005396!1.79e-11!2;UBERON:0004573!5.03e-11!33;UBERON:0004571!5.03e-11!33;UBERON:0001529!5.26e-11!2;UBERON:0007204!5.26e-11!2;UBERON:0002193!8.68e-11!112;UBERON:0002405!2.09e-10!115;UBERON:0001981!8.75e-10!60;UBERON:0007500!8.75e-10!60;UBERON:0004537!8.75e-10!60;UBERON:0006965!8.75e-10!60;UBERON:0000055!3.35e-08!69;UBERON:0002049!3.92e-08!79;UBERON:0007798!3.92e-08!79;UBERON:0004872!1.65e-07!84;UBERON:0001896!1.80e-07!3;UBERON:0005290!1.80e-07!3;UBERON:0010096!1.80e-07!3|ontology_enrichment_uberon_v019=UBERON:0001529;7.79e-09;2!UBERON:0005396;7.79e-09;2!UBERON:0007204;7.79e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.62e-19,76;UBERON:0001474,1.53e-17,82;UBERON:0004765,6.35e-16,90;UBERON:0002405,2.19e-15,93;UBERON:0002390,1.45e-14,98;UBERON:0003061,1.45e-14,98;UBERON:0001434,2.94e-14,100;UBERON:0002193,3.83e-13,108;UBERON:0002204,5.19e-12,167;UBERON:0003081,1.45e-11,203;UBERON:0005396,7.49e-09,2;UBERON:0001529,8.09e-09,2;UBERON:0007204,8.09e-09,2;UBERON:0000926,5.11e-07,315;UBERON:0004120,5.11e-07,315;UBERON:0006603,5.11e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,1.66198622559563,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0,2.14258724659632,0.320929027076094,2.55734850319616,0,0,0,5.5139755339431,6.24123747160254,11.2108004819203,0,0,0,3.63239701580021,9.20694089968912,18.6712808590122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28250494472703,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561320188866147,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,1.43124886741991,0,0,0.190630193923825,0,0,0.636406495851874,1.56989728039846,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr7:22702932..22702943,- | |||
|id=chr7:22702932..22702943,- | |||
|ontology_enrichment_celltype=CL:0002057!6.54e-32!42;CL:0000860!1.60e-29!45;CL:0002194!3.82e-22!63;CL:0000576!3.82e-22!63;CL:0000040!3.82e-22!63;CL:0000559!3.82e-22!63;CL:0002009!2.39e-21!65;CL:0000839!1.48e-19!70;CL:0000557!3.16e-19!71;CL:0000766!1.03e-17!76;CL:0000359!7.01e-14!32;CL:0002596!1.79e-11!2;CL:0002087!3.37e-11!119;CL:0002589!5.26e-11!2;CL:0000763!8.68e-11!112;CL:0000049!8.68e-11!112;CL:0002031!1.39e-10!124;CL:0000192!3.85e-10!42;CL:0000514!3.85e-10!42;CL:0000738!6.47e-09!140;CL:0000187!1.72e-07!54;CL:0000048!1.78e-07!430;CL:0000723!2.83e-07!436;CL:0000034!5.17e-07!444;CL:0000680!5.25e-07!57;CL:0000056!5.25e-07!57;CL:0000355!5.25e-07!57;CL:0002032!5.74e-07!165;CL:0000837!5.74e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-33;33!CL:0002057;2.17e-33;33!CL:0000473;7.68e-23;39!CL:0000234;7.68e-23;39!CL:0000576;8.30e-18;48!CL:0000766;6.14e-10;69!CL:0002589;7.79e-09;2!CL:0002596;7.79e-09;2!CL:0002087;9.87e-09;104!CL:0000763;1.49e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.91e-35,42;CL:0002057,1.91e-35,42;CL:0000473,6.35e-31,48;CL:0000234,6.35e-31,48;CL:0002194,1.38e-24,59;CL:0000576,1.38e-24,59;CL:0000040,1.38e-24,59;CL:0000559,1.38e-24,59;CL:0002009,9.10e-24,61;CL:0000839,6.21e-22,66;CL:0000557,1.34e-21,67;CL:0000766,4.61e-20,72;CL:0000763,3.83e-13,108;CL:0000049,3.83e-13,108;CL:0002087,2.71e-12,115;CL:0002031,9.57e-12,120;CL:0000738,2.93e-10,136;CL:0002596,7.49e-09,2;CL:0002589,8.09e-09,2;CL:0002032,1.61e-08,161;CL:0000837,1.61e-08,161;CL:0000037,4.01e-08,168;CL:0000988,1.17e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.91e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!7.75e-18!167;UBERON:0002371!1.23e-16!80;UBERON:0001474!3.30e-15!86;UBERON:0003081!6.10e-15!216;UBERON:0001637!1.51e-12!42;UBERON:0003509!1.51e-12!42;UBERON:0004572!1.51e-12!42;UBERON:0004765!2.22e-12!101;UBERON:0001434!2.22e-12!101;UBERON:0002390!3.20e-12!102;UBERON:0003061!3.20e-12!102;UBERON:0005396!1.79e-11!2;UBERON:0004573!5.03e-11!33;UBERON:0004571!5.03e-11!33;UBERON:0001529!5.26e-11!2;UBERON:0007204!5.26e-11!2;UBERON:0002193!8.68e-11!112;UBERON:0002405!2.09e-10!115;UBERON:0001981!8.75e-10!60;UBERON:0007500!8.75e-10!60;UBERON:0004537!8.75e-10!60;UBERON:0006965!8.75e-10!60;UBERON:0000055!3.35e-08!69;UBERON:0002049!3.92e-08!79;UBERON:0007798!3.92e-08!79;UBERON:0004872!1.65e-07!84;UBERON:0001896!1.80e-07!3;UBERON:0005290!1.80e-07!3;UBERON:0010096!1.80e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;7.79e-09;2!UBERON:0005396;7.79e-09;2!UBERON:0007204;7.79e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.62e-19,76;UBERON:0001474,1.53e-17,82;UBERON:0004765,6.35e-16,90;UBERON:0002405,2.19e-15,93;UBERON:0002390,1.45e-14,98;UBERON:0003061,1.45e-14,98;UBERON:0001434,2.94e-14,100;UBERON:0002193,3.83e-13,108;UBERON:0002204,5.19e-12,167;UBERON:0003081,1.45e-11,203;UBERON:0005396,7.49e-09,2;UBERON:0001529,8.09e-09,2;UBERON:0007204,8.09e-09,2;UBERON:0000926,5.11e-07,315;UBERON:0004120,5.11e-07,315;UBERON:0006603,5.11e-07,315 | |||
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|short_description=p@chr7:22702932..22702943,- | |||
}} |
Revision as of 00:32, 14 September 2013
Short description: | p@chr7:22702932..22702943, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:22702932..22702943, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.91e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.91e-35 | 42 |
defensive cell | 6.35e-31 | 48 |
phagocyte | 6.35e-31 | 48 |
monopoietic cell | 1.38e-24 | 59 |
monocyte | 1.38e-24 | 59 |
monoblast | 1.38e-24 | 59 |
promonocyte | 1.38e-24 | 59 |
macrophage dendritic cell progenitor | 9.10e-24 | 61 |
myeloid lineage restricted progenitor cell | 6.21e-22 | 66 |
granulocyte monocyte progenitor cell | 1.34e-21 | 67 |
myeloid leukocyte | 4.61e-20 | 72 |
myeloid cell | 3.83e-13 | 108 |
common myeloid progenitor | 3.83e-13 | 108 |
nongranular leukocyte | 2.71e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 9.57e-12 | 120 |
leukocyte | 2.93e-10 | 136 |
smooth muscle cell of the carotid artery | 7.49e-09 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 8.09e-09 | 2 |
hematopoietic oligopotent progenitor cell | 1.61e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-08 | 161 |
hematopoietic stem cell | 4.01e-08 | 168 |
hematopoietic cell | 1.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.62e-19 | 76 |
bone element | 1.53e-17 | 82 |
skeletal element | 6.35e-16 | 90 |
immune system | 2.19e-15 | 93 |
hematopoietic system | 1.45e-14 | 98 |
blood island | 1.45e-14 | 98 |
skeletal system | 2.94e-14 | 100 |
hemolymphoid system | 3.83e-13 | 108 |
musculoskeletal system | 5.19e-12 | 167 |
lateral plate mesoderm | 1.45e-11 | 203 |
carotid artery segment | 7.49e-09 | 2 |
brachiocephalic artery | 8.09e-09 | 2 |
brachiocephalic vasculature | 8.09e-09 | 2 |
mesoderm | 5.11e-07 | 315 |
mesoderm-derived structure | 5.11e-07 | 315 |
presumptive mesoderm | 5.11e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.