FFCP PHASE1:Hg19::chr6:168251000..168251007,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2725|description=CAGE_peak_at_chr6:168251000..168251007,+|id=chr6:168251000..168251007,+|ontology_enrichment_celltype=CL:0002586!3.27e-31!3;CL:0000149!1.38e-23!4;CL:0000077!2.74e-13!19;CL:0000313!1.60e-11!1;CL:0000147!3.99e-07!14|ontology_enrichment_celltype_v019=CL:0002586;6.53e-66;3!CL:0000149;8.47e-50;4!CL:0002097;4.90e-26;2!CL:0000174;7.35e-18;3!CL:0000147;3.93e-15;14!CL:0000150;7.69e-07;9!CL:0000163;7.69e-07;9|ontology_enrichment_celltype_v019_2=CL:0002586,6.53e-66,3;CL:0000149,8.47e-50,4;CL:0002097,4.32e-26,2;CL:0000174,6.76e-18,3;CL:0000147,3.93e-15,14;CL:0000150,7.48e-07,9;CL:0000163,7.48e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2152!1.60e-11!1|ontology_enrichment_disease_v019=DOID:4468;4.90e-26;2!DOID:170;1.27e-09;6|ontology_enrichment_disease_v019_2=DOID:4468,5.56e-26,2;DOID:170,1.22e-09,6|ontology_enrichment_uberon=UBERON:0001781!3.27e-31!3;UBERON:0001782!3.27e-31!3;UBERON:0005424!3.27e-31!3;UBERON:0000966!5.29e-19!5;UBERON:0005388!5.29e-19!5;UBERON:0001802!5.29e-19!5;UBERON:0004911!1.60e-11!1;UBERON:0007625!6.11e-09!11;UBERON:0002048!1.97e-07!22;UBERON:0000117!1.97e-07!22;UBERON:0000171!1.97e-07!22;UBERON:0000170!1.97e-07!22;UBERON:0005597!1.97e-07!22;UBERON:0000118!1.97e-07!22|ontology_enrichment_uberon_v019=UBERON:0001781;6.53e-66;3!UBERON:0001782;6.53e-66;3!UBERON:0000966;4.05e-40;5!UBERON:0005388;4.05e-40;5!UBERON:0001802;4.05e-40;5!UBERON:0007625;6.17e-19;11!UBERON:0002369;7.35e-18;3!UBERON:0001235;7.35e-18;3!UBERON:0006858;7.35e-18;3!UBERON:0000019;1.91e-11;19!UBERON:0000047;1.91e-11;19!UBERON:0004088;1.91e-11;19!UBERON:0010230;1.91e-11;19!UBERON:0000970;6.30e-11;20!UBERON:0002104;1.86e-10;21!UBERON:0001456;1.86e-10;21!UBERON:0000020;1.22e-09;23!UBERON:0001032;2.78e-09;24!UBERON:0004456;2.78e-09;24|ontology_enrichment_uberon_v019_2=UBERON:0001782,6.53e-66,3;UBERON:0005424,6.53e-66,3;UBERON:0001781,8.47e-50,4;UBERON:0000966,1.17e-33,6;UBERON:0005388,1.17e-33,6;UBERON:0001802,1.17e-33,6;UBERON:0007625,6.17e-19,11;UBERON:0002369,6.76e-18,3;UBERON:0001235,6.76e-18,3;UBERON:0006858,6.76e-18,3;UBERON:0000019,6.30e-11,20;UBERON:0000047,6.30e-11,20;UBERON:0010312,6.30e-11,20;UBERON:0004088,6.30e-11,20;UBERON:0010230,6.30e-11,20;UBERON:0003072,6.30e-11,20;UBERON:0004128,6.30e-11,20;UBERON:0003071,6.30e-11,20;UBERON:0000970,1.86e-10,21;UBERON:0002104,1.86e-10,21;UBERON:0001456,4.96e-10,22;UBERON:0000020,2.78e-09,24;UBERON:0001032,2.78e-09,24;UBERON:0004456,2.78e-09,24;UBERON:0005085,2.05e-07,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53870075069834,2.29610251989794,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24405301213784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71771501024837,0.782982875895635,0,0,0,0,0,0.657852148736121,0,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:168251000..168251007,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2725 | |||
|description=CAGE_peak_at_chr6:168251000..168251007,+ | |||
|id=chr6:168251000..168251007,+ | |||
|ontology_enrichment_celltype=CL:0002586!3.27e-31!3;CL:0000149!1.38e-23!4;CL:0000077!2.74e-13!19;CL:0000313!1.60e-11!1;CL:0000147!3.99e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002586;6.53e-66;3!CL:0000149;8.47e-50;4!CL:0002097;4.90e-26;2!CL:0000174;7.35e-18;3!CL:0000147;3.93e-15;14!CL:0000150;7.69e-07;9!CL:0000163;7.69e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,6.53e-66,3;CL:0000149,8.47e-50,4;CL:0002097,4.32e-26,2;CL:0000174,6.76e-18,3;CL:0000147,3.93e-15,14;CL:0000150,7.48e-07,9;CL:0000163,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2152!1.60e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:4468;4.90e-26;2!DOID:170;1.27e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.56e-26,2;DOID:170,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001781!3.27e-31!3;UBERON:0001782!3.27e-31!3;UBERON:0005424!3.27e-31!3;UBERON:0000966!5.29e-19!5;UBERON:0005388!5.29e-19!5;UBERON:0001802!5.29e-19!5;UBERON:0004911!1.60e-11!1;UBERON:0007625!6.11e-09!11;UBERON:0002048!1.97e-07!22;UBERON:0000117!1.97e-07!22;UBERON:0000171!1.97e-07!22;UBERON:0000170!1.97e-07!22;UBERON:0005597!1.97e-07!22;UBERON:0000118!1.97e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;6.53e-66;3!UBERON:0001782;6.53e-66;3!UBERON:0000966;4.05e-40;5!UBERON:0005388;4.05e-40;5!UBERON:0001802;4.05e-40;5!UBERON:0007625;6.17e-19;11!UBERON:0002369;7.35e-18;3!UBERON:0001235;7.35e-18;3!UBERON:0006858;7.35e-18;3!UBERON:0000019;1.91e-11;19!UBERON:0000047;1.91e-11;19!UBERON:0004088;1.91e-11;19!UBERON:0010230;1.91e-11;19!UBERON:0000970;6.30e-11;20!UBERON:0002104;1.86e-10;21!UBERON:0001456;1.86e-10;21!UBERON:0000020;1.22e-09;23!UBERON:0001032;2.78e-09;24!UBERON:0004456;2.78e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,6.53e-66,3;UBERON:0005424,6.53e-66,3;UBERON:0001781,8.47e-50,4;UBERON:0000966,1.17e-33,6;UBERON:0005388,1.17e-33,6;UBERON:0001802,1.17e-33,6;UBERON:0007625,6.17e-19,11;UBERON:0002369,6.76e-18,3;UBERON:0001235,6.76e-18,3;UBERON:0006858,6.76e-18,3;UBERON:0000019,6.30e-11,20;UBERON:0000047,6.30e-11,20;UBERON:0010312,6.30e-11,20;UBERON:0004088,6.30e-11,20;UBERON:0010230,6.30e-11,20;UBERON:0003072,6.30e-11,20;UBERON:0004128,6.30e-11,20;UBERON:0003071,6.30e-11,20;UBERON:0000970,1.86e-10,21;UBERON:0002104,1.86e-10,21;UBERON:0001456,4.96e-10,22;UBERON:0000020,2.78e-09,24;UBERON:0001032,2.78e-09,24;UBERON:0004456,2.78e-09,24;UBERON:0005085,2.05e-07,31 | |||
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|short_description=p@chr6:168251000..168251007,+ | |||
}} |
Revision as of 19:23, 13 September 2013
Short description: | p@chr6:168251000..168251007, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:168251000..168251007, + |
Coexpression cluster: | C2725_clear_mesothelioma_Retinal_serous_gall_signet_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.53e-66 | 3 |
visual pigment cell | 8.47e-50 | 4 |
cortical cell of adrenal gland | 4.32e-26 | 2 |
steroid hormone secreting cell | 6.76e-18 | 3 |
pigment cell | 3.93e-15 | 14 |
glandular epithelial cell | 7.48e-07 | 9 |
endocrine cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 6.53e-66 | 3 |
presumptive retinal pigmented epithelium | 6.53e-66 | 3 |
layer of retina | 8.47e-50 | 4 |
retina | 1.17e-33 | 6 |
photoreceptor array | 1.17e-33 | 6 |
posterior segment of eyeball | 1.17e-33 | 6 |
pigment epithelium of eye | 6.17e-19 | 11 |
adrenal gland | 6.76e-18 | 3 |
adrenal cortex | 6.76e-18 | 3 |
adrenal/interrenal gland | 6.76e-18 | 3 |
camera-type eye | 6.30e-11 | 20 |
simple eye | 6.30e-11 | 20 |
immature eye | 6.30e-11 | 20 |
ocular region | 6.30e-11 | 20 |
eyeball of camera-type eye | 6.30e-11 | 20 |
optic cup | 6.30e-11 | 20 |
optic vesicle | 6.30e-11 | 20 |
eye primordium | 6.30e-11 | 20 |
eye | 1.86e-10 | 21 |
visual system | 1.86e-10 | 21 |
face | 4.96e-10 | 22 |
sense organ | 2.78e-09 | 24 |
sensory system | 2.78e-09 | 24 |
entire sense organ system | 2.78e-09 | 24 |
ectodermal placode | 2.05e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.56e-26 | 2 |
endocrine gland cancer | 1.22e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.