FFCP PHASE1:Hg19::chr6:136359188..136359203,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27115 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8792 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=14bp_to_uc003qgr.2_5end | |||
|description=CAGE_peak_5_at_PDE7B_5end | |||
|id=chr6:136359188..136359203,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.57e-25!180;CL:0000680!5.75e-24!57;CL:0000056!5.75e-24!57;CL:0000355!5.75e-24!57;CL:0000187!2.11e-23!54;CL:0000183!2.82e-21!59;CL:0000222!6.08e-20!119;CL:0000192!1.59e-19!42;CL:0000514!1.59e-19!42;CL:0000393!7.53e-19!60;CL:0000211!7.53e-19!60;CL:0000359!1.12e-18!32;CL:0000057!1.48e-18!75;CL:0002494!1.36e-10!16;CL:0002620!6.54e-10!23;CL:0002139!2.77e-08!24;CL:0002539!5.97e-08!10;CL:0000115!1.29e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.71e-23;32!CL:0000192;1.44e-15;43!CL:0002494;1.59e-13;16!CL:0000187;7.65e-13;55!CL:0002539;1.45e-11;10!CL:0000393;3.45e-11;61!CL:0000211;3.45e-11;61!CL:0002139;2.49e-10;24!CL:0002620;1.16e-09;23!CL:0000115;1.55e-08;36!CL:0000071;2.69e-08;18!CL:1000413;1.39e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,2.47e-25,55;CL:0000680,1.12e-24,58;CL:0000056,1.12e-24,58;CL:0000355,1.12e-24,58;CL:0000359,7.21e-24,32;CL:0000222,2.49e-23,121;CL:0000393,1.75e-21,61;CL:0000211,1.75e-21,61;CL:0000192,1.15e-20,43;CL:0000514,1.15e-20,43;CL:0000057,7.98e-17,76;CL:0002494,1.73e-13,16;CL:0002539,1.30e-11,10;CL:0000048,6.96e-11,427;CL:0002139,1.79e-10,24;CL:0000723,2.63e-10,433;CL:0000115,1.16e-09,36;CL:0000034,1.44e-09,441;CL:0002620,1.50e-09,23;CL:0000071,1.79e-08,18;CL:0002546,1.79e-08,18;CL:0002078,3.97e-08,45;CL:1000413,7.98e-08,9;CL:0002321,1.93e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.44e-15;43!CL:0000355;2.09e-12;58!CL:0002546;2.69e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.00e-07;5!DOID:450;4.00e-07;5!DOID:66;4.00e-07;5!DOID:423;4.00e-07;5!DOID:0080000;4.00e-07;5!DOID:11722;4.00e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.83e-07,5;DOID:450,4.83e-07,5;DOID:66,4.83e-07,5;DOID:423,4.83e-07,5;DOID:0080000,4.83e-07,5;DOID:11722,4.83e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!6.58e-31!79;UBERON:0007798!6.58e-31!79;UBERON:0001009!1.82e-29!113;UBERON:0004535!2.99e-29!110;UBERON:0004872!2.17e-28!84;UBERON:0000914!1.03e-26!83;UBERON:0002329!1.03e-26!83;UBERON:0003077!1.03e-26!83;UBERON:0003059!1.03e-26!83;UBERON:0007282!1.03e-26!83;UBERON:0009618!1.03e-26!83;UBERON:0007285!1.03e-26!83;UBERON:0004290!2.00e-25!70;UBERON:0000055!2.00e-25!69;UBERON:0001637!2.09e-25!42;UBERON:0003509!2.09e-25!42;UBERON:0004572!2.09e-25!42;UBERON:0001981!3.86e-25!60;UBERON:0007500!3.86e-25!60;UBERON:0004537!3.86e-25!60;UBERON:0006965!3.86e-25!60;UBERON:0002385!4.92e-24!63;UBERON:0001015!4.92e-24!63;UBERON:0000383!4.92e-24!63;UBERON:0001134!9.61e-24!61;UBERON:0002036!9.61e-24!61;UBERON:0003082!9.61e-24!61;UBERON:0003914!4.90e-22!118;UBERON:0000477!1.02e-21!286;UBERON:0004573!3.65e-21!33;UBERON:0004571!3.65e-21!33;UBERON:0000486!7.65e-20!82;UBERON:0000119!1.20e-18!312;UBERON:0004111!3.08e-18!241;UBERON:0000483!8.89e-18!309;UBERON:0000025!2.19e-17!194;UBERON:0000490!3.88e-16!138;UBERON:0005256!1.20e-15!143;UBERON:0000475!4.75e-15!365;UBERON:0000948!2.00e-14!24;UBERON:0005498!2.00e-14!24;UBERON:0004140!2.00e-14!24;UBERON:0009881!2.00e-14!24;UBERON:0004141!2.00e-14!24;UBERON:0003084!2.00e-14!24;UBERON:0007005!2.00e-14!24;UBERON:0004139!2.00e-14!24;UBERON:0004291!2.00e-14!24;UBERON:0007100!3.88e-14!27;UBERON:0000947!6.57e-14!21;UBERON:0010191!6.57e-14!21;UBERON:0000481!1.76e-13!347;UBERON:0000468!2.74e-13!659;UBERON:0000467!1.46e-11!625;UBERON:0000480!2.06e-11!626;UBERON:0001135!1.85e-08!15;UBERON:0002100!3.29e-08!216;UBERON:0004237!5.97e-08!10;UBERON:0004695!5.97e-08!10;UBERON:0002111!5.97e-08!10;UBERON:0004178!5.97e-08!10;UBERON:0007023!1.06e-07!115;UBERON:0003103!5.49e-07!69;UBERON:0002050!9.73e-07!605;UBERON:0005423!9.73e-07!605 | |||
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| |||
|short_description=p5@PDE7B | |||
}} |
Revision as of 18:10, 13 September 2013
Short description: | p5@PDE7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PDE7B_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_uc003qgr.2_5end |
EntrezGene: | PDE7B |
HGNC: | 8792 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 2.47e-25 | 55 |
muscle precursor cell | 1.12e-24 | 58 |
myoblast | 1.12e-24 | 58 |
multi-potent skeletal muscle stem cell | 1.12e-24 | 58 |
vascular associated smooth muscle cell | 7.21e-24 | 32 |
mesodermal cell | 2.49e-23 | 121 |
electrically responsive cell | 1.75e-21 | 61 |
electrically active cell | 1.75e-21 | 61 |
smooth muscle cell | 1.15e-20 | 43 |
smooth muscle myoblast | 1.15e-20 | 43 |
fibroblast | 7.98e-17 | 76 |
cardiocyte | 1.73e-13 | 16 |
aortic smooth muscle cell | 1.30e-11 | 10 |
multi fate stem cell | 6.96e-11 | 427 |
endothelial cell of vascular tree | 1.79e-10 | 24 |
somatic stem cell | 2.63e-10 | 433 |
endothelial cell | 1.16e-09 | 36 |
stem cell | 1.44e-09 | 441 |
skin fibroblast | 1.50e-09 | 23 |
blood vessel endothelial cell | 1.79e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.79e-08 | 18 |
meso-epithelial cell | 3.97e-08 | 45 |
endothelial cell of artery | 7.98e-08 | 9 |
embryonic cell | 1.93e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.83e-07 | 5 |
myotonic disease | 4.83e-07 | 5 |
muscle tissue disease | 4.83e-07 | 5 |
myopathy | 4.83e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.