FFCP PHASE1:Hg19::chr6:113697568..113697589,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2837|description=CAGE_peak_at_chr6:113697568..113697589,-|id=chr6:113697568..113697589,-|ontology_enrichment_celltype=CL:0000055!6.61e-32!180;CL:0000057!4.18e-29!75;CL:0002620!2.17e-15!23;CL:0000144!4.39e-13!625;CL:0002371!9.55e-13!591;CL:0000048!1.65e-12!430;CL:0000723!6.69e-12!436;CL:0000034!4.01e-11!444;CL:0000548!3.20e-10!679;CL:0000004!3.20e-10!679;CL:0000255!3.20e-10!679;CL:0000012!5.50e-10!682;CL:0002334!1.27e-09!12;CL:0000359!2.34e-09!32;CL:0000680!8.89e-09!57;CL:0000056!8.89e-09!57;CL:0000355!8.89e-09!57;CL:0000192!1.91e-08!42;CL:0000514!1.91e-08!42;CL:0002556!2.08e-08!6;CL:0000187!2.20e-07!54;CL:0000222!3.90e-07!119;CL:0000003!4.58e-07!722|ontology_enrichment_celltype_v019=CL:0002620;4.85e-26;23!CL:1000306;2.56e-16;4!CL:0002547;2.56e-16;4!CL:0000057;2.15e-11;73!CL:0000197;2.85e-11;6!CL:0000098;2.85e-11;6!CL:0002167;2.85e-11;6!CL:0002556;4.99e-11;6!CL:0002583;1.38e-08;2!CL:0002334;1.01e-07;12|ontology_enrichment_celltype_v019_2=CL:0000057,2.35e-33,76;CL:0002620,3.96e-26,23;CL:1000306,3.03e-16,4;CL:0002547,3.03e-16,4;CL:0000197,2.76e-11,6;CL:0000098,2.76e-11,6;CL:0002167,2.76e-11,6;CL:0002556,8.42e-11,6;CL:0002583,4.79e-09,2;CL:0002334,1.06e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!5.19e-08!5;DOID:450!5.19e-08!5;DOID:66!5.19e-08!5;DOID:423!5.19e-08!5;DOID:0080000!5.19e-08!5;DOID:11722!5.19e-08!5|ontology_enrichment_disease_v019=DOID:17;1.26e-19;5!DOID:450;1.26e-19;5!DOID:66;1.26e-19;5!DOID:423;1.26e-19;5!DOID:0080000;1.26e-19;5!DOID:11722;1.26e-19;5|ontology_enrichment_disease_v019_2=DOID:17,5.41e-20,5;DOID:450,5.41e-20,5;DOID:66,5.41e-20,5;DOID:423,5.41e-20,5;DOID:0080000,5.41e-20,5;DOID:11722,5.41e-20,5|ontology_enrichment_uberon=UBERON:0000914!1.22e-12!83;UBERON:0002329!1.22e-12!83;UBERON:0003077!1.22e-12!83;UBERON:0003059!1.22e-12!83;UBERON:0007282!1.22e-12!83;UBERON:0009618!1.22e-12!83;UBERON:0007285!1.22e-12!83;UBERON:0003102!2.70e-10!95;UBERON:0001637!3.74e-10!42;UBERON:0003509!3.74e-10!42;UBERON:0004572!3.74e-10!42;UBERON:0002199!6.90e-09!45;UBERON:0002416!6.90e-09!45;UBERON:0003129!1.55e-08!11;UBERON:0001758!2.08e-08!6;UBERON:0003672!2.08e-08!6;UBERON:0002097!2.23e-08!40;UBERON:0000486!2.25e-08!82;UBERON:0004573!2.29e-08!33;UBERON:0004571!2.29e-08!33;UBERON:0004872!2.59e-08!84;UBERON:0001981!2.59e-08!60;UBERON:0007500!2.59e-08!60;UBERON:0004537!2.59e-08!60;UBERON:0006965!2.59e-08!60;UBERON:0004290!2.99e-08!70;UBERON:0002049!7.56e-08!79;UBERON:0007798!7.56e-08!79;UBERON:0001134!1.01e-07!61;UBERON:0002036!1.01e-07!61;UBERON:0003082!1.01e-07!61;UBERON:0000055!1.55e-07!69;UBERON:0002385!2.99e-07!63;UBERON:0001015!2.99e-07!63;UBERON:0000383!2.99e-07!63;UBERON:0004535!5.40e-07!110;UBERON:0005256!6.13e-07!143;UBERON:0000075!7.05e-07!13;UBERON:0005944!7.05e-07!13;UBERON:0004288!7.05e-07!13;UBERON:0003089!7.05e-07!13;UBERON:0001828!8.61e-07!8|ontology_enrichment_uberon_v019=UBERON:0004797;2.56e-16;4!UBERON:0000415;2.56e-16;4!UBERON:0007240;2.56e-16;4!UBERON:0005742;2.56e-16;4!UBERON:0005734;2.56e-16;4!UBERON:0004664;2.56e-16;4!UBERON:0004663;2.56e-16;4!UBERON:0002199;5.80e-12;46!UBERON:0002416;5.80e-12;46!UBERON:0002097;7.55e-12;41!UBERON:0001758;4.99e-11;6!UBERON:0003672;4.99e-11;6!UBERON:0003129;1.86e-09;7!UBERON:0003102;1.27e-08;50!UBERON:0000947;2.31e-08;21!UBERON:0010191;2.31e-08;21|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.52e-18,46;UBERON:0002416,3.52e-18,46;UBERON:0000415,3.03e-16,4;UBERON:0007240,3.03e-16,4;UBERON:0005742,3.03e-16,4;UBERON:0005734,3.03e-16,4;UBERON:0004664,3.03e-16,4;UBERON:0004663,3.03e-16,4;UBERON:0002097,1.19e-15,41;UBERON:0003102,9.55e-14,99;UBERON:0001758,8.42e-11,6;UBERON:0003672,8.42e-11,6;UBERON:0004797,2.60e-09,7;UBERON:0003129,2.90e-09,7;UBERON:0000947,1.75e-08,21;UBERON:0010191,1.75e-08,21|phase1_expression=0.181678379270557,0.428201047781966,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,1.95173119516203,0,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0.579386075843295,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,1.52054421143703,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.13967460498122,3.17782033951725,1.43418310374407,2.12801029319014,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0.140450806702248,0.408308342509787,0.491337269247072,0.103325781175765,1.18800285728205,0.989067717114227,0,0,0.673344455816265,0.375355559615893,1.10825646193673,4.82875382968922,3.67785354958824,1.05166641234618,0.113432183160021,2.332065263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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2837 | |||
|description=CAGE_peak_at_chr6:113697568..113697589,- | |||
|id=chr6:113697568..113697589,- | |||
|ontology_enrichment_celltype=CL:0000055!6.61e-32!180;CL:0000057!4.18e-29!75;CL:0002620!2.17e-15!23;CL:0000144!4.39e-13!625;CL:0002371!9.55e-13!591;CL:0000048!1.65e-12!430;CL:0000723!6.69e-12!436;CL:0000034!4.01e-11!444;CL:0000548!3.20e-10!679;CL:0000004!3.20e-10!679;CL:0000255!3.20e-10!679;CL:0000012!5.50e-10!682;CL:0002334!1.27e-09!12;CL:0000359!2.34e-09!32;CL:0000680!8.89e-09!57;CL:0000056!8.89e-09!57;CL:0000355!8.89e-09!57;CL:0000192!1.91e-08!42;CL:0000514!1.91e-08!42;CL:0002556!2.08e-08!6;CL:0000187!2.20e-07!54;CL:0000222!3.90e-07!119;CL:0000003!4.58e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.85e-26;23!CL:1000306;2.56e-16;4!CL:0002547;2.56e-16;4!CL:0000057;2.15e-11;73!CL:0000197;2.85e-11;6!CL:0000098;2.85e-11;6!CL:0002167;2.85e-11;6!CL:0002556;4.99e-11;6!CL:0002583;1.38e-08;2!CL:0002334;1.01e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.35e-33,76;CL:0002620,3.96e-26,23;CL:1000306,3.03e-16,4;CL:0002547,3.03e-16,4;CL:0000197,2.76e-11,6;CL:0000098,2.76e-11,6;CL:0002167,2.76e-11,6;CL:0002556,8.42e-11,6;CL:0002583,4.79e-09,2;CL:0002334,1.06e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.19e-08!5;DOID:450!5.19e-08!5;DOID:66!5.19e-08!5;DOID:423!5.19e-08!5;DOID:0080000!5.19e-08!5;DOID:11722!5.19e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.26e-19;5!DOID:450;1.26e-19;5!DOID:66;1.26e-19;5!DOID:423;1.26e-19;5!DOID:0080000;1.26e-19;5!DOID:11722;1.26e-19;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.41e-20,5;DOID:450,5.41e-20,5;DOID:66,5.41e-20,5;DOID:423,5.41e-20,5;DOID:0080000,5.41e-20,5;DOID:11722,5.41e-20,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.22e-12!83;UBERON:0002329!1.22e-12!83;UBERON:0003077!1.22e-12!83;UBERON:0003059!1.22e-12!83;UBERON:0007282!1.22e-12!83;UBERON:0009618!1.22e-12!83;UBERON:0007285!1.22e-12!83;UBERON:0003102!2.70e-10!95;UBERON:0001637!3.74e-10!42;UBERON:0003509!3.74e-10!42;UBERON:0004572!3.74e-10!42;UBERON:0002199!6.90e-09!45;UBERON:0002416!6.90e-09!45;UBERON:0003129!1.55e-08!11;UBERON:0001758!2.08e-08!6;UBERON:0003672!2.08e-08!6;UBERON:0002097!2.23e-08!40;UBERON:0000486!2.25e-08!82;UBERON:0004573!2.29e-08!33;UBERON:0004571!2.29e-08!33;UBERON:0004872!2.59e-08!84;UBERON:0001981!2.59e-08!60;UBERON:0007500!2.59e-08!60;UBERON:0004537!2.59e-08!60;UBERON:0006965!2.59e-08!60;UBERON:0004290!2.99e-08!70;UBERON:0002049!7.56e-08!79;UBERON:0007798!7.56e-08!79;UBERON:0001134!1.01e-07!61;UBERON:0002036!1.01e-07!61;UBERON:0003082!1.01e-07!61;UBERON:0000055!1.55e-07!69;UBERON:0002385!2.99e-07!63;UBERON:0001015!2.99e-07!63;UBERON:0000383!2.99e-07!63;UBERON:0004535!5.40e-07!110;UBERON:0005256!6.13e-07!143;UBERON:0000075!7.05e-07!13;UBERON:0005944!7.05e-07!13;UBERON:0004288!7.05e-07!13;UBERON:0003089!7.05e-07!13;UBERON:0001828!8.61e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.56e-16;4!UBERON:0000415;2.56e-16;4!UBERON:0007240;2.56e-16;4!UBERON:0005742;2.56e-16;4!UBERON:0005734;2.56e-16;4!UBERON:0004664;2.56e-16;4!UBERON:0004663;2.56e-16;4!UBERON:0002199;5.80e-12;46!UBERON:0002416;5.80e-12;46!UBERON:0002097;7.55e-12;41!UBERON:0001758;4.99e-11;6!UBERON:0003672;4.99e-11;6!UBERON:0003129;1.86e-09;7!UBERON:0003102;1.27e-08;50!UBERON:0000947;2.31e-08;21!UBERON:0010191;2.31e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.52e-18,46;UBERON:0002416,3.52e-18,46;UBERON:0000415,3.03e-16,4;UBERON:0007240,3.03e-16,4;UBERON:0005742,3.03e-16,4;UBERON:0005734,3.03e-16,4;UBERON:0004664,3.03e-16,4;UBERON:0004663,3.03e-16,4;UBERON:0002097,1.19e-15,41;UBERON:0003102,9.55e-14,99;UBERON:0001758,8.42e-11,6;UBERON:0003672,8.42e-11,6;UBERON:0004797,2.60e-09,7;UBERON:0003129,2.90e-09,7;UBERON:0000947,1.75e-08,21;UBERON:0010191,1.75e-08,21 | |||
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|short_description=p@chr6:113697568..113697589,- | |||
}} |
Revision as of 17:28, 13 September 2013
Short description: | p@chr6:113697568..113697589, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:113697568..113697589, - |
Coexpression cluster: | C2837_liposarcoma_Fibroblast_Ewing_Olfactory_mesothelioma_Smooth_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.35e-33 | 76 |
skin fibroblast | 3.96e-26 | 23 |
fibroblast of tunica adventitia of artery | 3.03e-16 | 4 |
fibroblast of the aortic adventitia | 3.03e-16 | 4 |
receptor cell | 2.76e-11 | 6 |
sensory epithelial cell | 2.76e-11 | 6 |
olfactory epithelial cell | 2.76e-11 | 6 |
fibroblast of periodontium | 8.42e-11 | 6 |
subcutaneous preadipocyte | 4.79e-09 | 2 |
preadipocyte | 1.06e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
integument | 3.52e-18 | 46 |
integumental system | 3.52e-18 | 46 |
artery wall | 3.03e-16 | 4 |
tunica adventitia of artery | 3.03e-16 | 4 |
adventitia | 3.03e-16 | 4 |
tunica adventitia of blood vessel | 3.03e-16 | 4 |
aorta tunica adventitia | 3.03e-16 | 4 |
aorta wall | 3.03e-16 | 4 |
skin of body | 1.19e-15 | 41 |
surface structure | 9.55e-14 | 99 |
periodontium | 8.42e-11 | 6 |
dentition | 8.42e-11 | 6 |
blood vessel layer | 2.60e-09 | 7 |
skull | 2.90e-09 | 7 |
aorta | 1.75e-08 | 21 |
aortic system | 1.75e-08 | 21 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.41e-20 | 5 |
myotonic disease | 5.41e-20 | 5 |
muscle tissue disease | 5.41e-20 | 5 |
myopathy | 5.41e-20 | 5 |
muscular disease | 5.41e-20 | 5 |
myotonic dystrophy | 5.41e-20 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.