FFCP PHASE1:Hg19::chr6:113697548..113697566,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2837|description=CAGE_peak_at_chr6:113697548..113697566,-|id=chr6:113697548..113697566,-|ontology_enrichment_celltype=CL:0000057!7.53e-40!75;CL:0000055!2.08e-35!180;CL:0002620!2.50e-27!23;CL:0002334!5.09e-15!12;CL:0000048!1.13e-12!430;CL:0000723!3.69e-12!436;CL:0000034!1.69e-11!444;CL:0002371!2.58e-08!591;CL:0000144!2.91e-08!625;CL:0000134!8.35e-08!358;CL:1000306!2.12e-07!4;CL:0002547!2.12e-07!4;CL:0002320!2.56e-07!365;CL:0000219!3.52e-07!390;CL:0000548!9.85e-07!679;CL:0000004!9.85e-07!679;CL:0000255!9.85e-07!679;CL:0000192!9.88e-07!42;CL:0000514!9.88e-07!42|ontology_enrichment_celltype_v019=CL:0002620;2.87e-39;23!CL:0000197;5.31e-09;6!CL:0000098;5.31e-09;6!CL:0002167;5.31e-09;6!CL:0000057;2.27e-08;73!CL:0000135;2.79e-08;3!CL:0000388;2.79e-08;3!CL:0000222;8.00e-07;1!CL:0002581;8.00e-07;1|ontology_enrichment_celltype_v019_2=CL:0002620,1.09e-39,23;CL:0000057,1.82e-25,76;CL:0000197,5.33e-09,6;CL:0000098,5.33e-09,6;CL:0002167,5.33e-09,6;CL:0000135,3.63e-08,3;CL:0000388,3.63e-08,3;CL:0002581,7.57e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!4.67e-10!5;DOID:450!4.67e-10!5;DOID:66!4.67e-10!5;DOID:423!4.67e-10!5;DOID:0080000!4.67e-10!5;DOID:11722!4.67e-10!5|ontology_enrichment_disease_v019=DOID:17;1.05e-27;5!DOID:450;1.05e-27;5!DOID:66;1.05e-27;5!DOID:423;1.05e-27;5!DOID:0080000;1.05e-27;5!DOID:11722;1.05e-27;5!DOID:3369;3.16e-07;1!DOID:4235;8.00e-07;1!DOID:3571;8.00e-07;1|ontology_enrichment_disease_v019_2=DOID:17,2.45e-28,5;DOID:450,2.45e-28,5;DOID:66,2.45e-28,5;DOID:423,2.45e-28,5;DOID:0080000,2.45e-28,5;DOID:11722,2.45e-28,5;DOID:3369,2.82e-07,1|ontology_enrichment_uberon=UBERON:0002199!6.78e-15!45;UBERON:0002416!6.78e-15!45;UBERON:0002097!2.19e-14!40;UBERON:0003102!7.95e-14!95;UBERON:0002384!4.54e-08!375;UBERON:0000914!5.41e-08!83;UBERON:0002329!5.41e-08!83;UBERON:0003077!5.41e-08!83;UBERON:0003059!5.41e-08!83;UBERON:0007282!5.41e-08!83;UBERON:0009618!5.41e-08!83;UBERON:0007285!5.41e-08!83;UBERON:0001637!6.39e-08!42;UBERON:0003509!6.39e-08!42;UBERON:0004572!6.39e-08!42;UBERON:0000415!2.12e-07!4;UBERON:0007240!2.12e-07!4;UBERON:0005742!2.12e-07!4;UBERON:0005734!2.12e-07!4;UBERON:0004664!2.12e-07!4;UBERON:0004663!2.12e-07!4|ontology_enrichment_uberon_v019=UBERON:0002097;3.51e-15;41!UBERON:0002199;4.85e-13;46!UBERON:0002416;4.85e-13;46!UBERON:0003102;6.13e-09;50!UBERON:0007846;2.79e-08;3!UBERON:0000043;2.79e-08;3!UBERON:0007845;2.79e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.47e-21,41;UBERON:0002199,1.72e-18,46;UBERON:0002416,1.72e-18,46;UBERON:0003102,1.83e-08,99;UBERON:0007846,3.63e-08,3;UBERON:0000043,3.63e-08,3;UBERON:0007845,3.63e-08,3;UBERON:0002384,7.47e-07,371|phase1_expression=0.908391896352783,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,0.434539556882471,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.633152558322899,1.85372853138506,0.860509862246441,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.298897361103602,0.587172493218824,0.161872944368132,0.98315564691574,0.816616685019573,0.61417158655884,0,0,0.247266929278557,0,0,0.505008341862199,0.250237039743928,0.554128230968366,0,1.83892677479412,0.300476117813194,0.113432183160021,1.25572744982203,1.92201649936711,1.69545520927649,2.40072876867522,1.8549455262919,5.15281080091258,1.67505170698431,4.05063197379039,3.70260619612555,2.52433774244115,0.644349290496095,2.10139873864455,1.42003837006646,2.21654616100809,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,2.14114786556594,1.57702415033935,1.40569697991256,0.300946099727719,0,1.03473071292505,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.767309866440312,0.841980283299221,0.256278298511402,1.53512174720011,0.321707842287215,1.48418066444991,0.462629081407967,0.710246901252508,0.492762936082855,0,0.464841513839837,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,2.20368642781448,0,0.308033580176089,0,0.869932992075073,0,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0.5396173727499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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2837 | |||
|description=CAGE_peak_at_chr6:113697548..113697566,- | |||
|id=chr6:113697548..113697566,- | |||
|ontology_enrichment_celltype=CL:0000057!7.53e-40!75;CL:0000055!2.08e-35!180;CL:0002620!2.50e-27!23;CL:0002334!5.09e-15!12;CL:0000048!1.13e-12!430;CL:0000723!3.69e-12!436;CL:0000034!1.69e-11!444;CL:0002371!2.58e-08!591;CL:0000144!2.91e-08!625;CL:0000134!8.35e-08!358;CL:1000306!2.12e-07!4;CL:0002547!2.12e-07!4;CL:0002320!2.56e-07!365;CL:0000219!3.52e-07!390;CL:0000548!9.85e-07!679;CL:0000004!9.85e-07!679;CL:0000255!9.85e-07!679;CL:0000192!9.88e-07!42;CL:0000514!9.88e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.87e-39;23!CL:0000197;5.31e-09;6!CL:0000098;5.31e-09;6!CL:0002167;5.31e-09;6!CL:0000057;2.27e-08;73!CL:0000135;2.79e-08;3!CL:0000388;2.79e-08;3!CL:0000222;8.00e-07;1!CL:0002581;8.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.09e-39,23;CL:0000057,1.82e-25,76;CL:0000197,5.33e-09,6;CL:0000098,5.33e-09,6;CL:0002167,5.33e-09,6;CL:0000135,3.63e-08,3;CL:0000388,3.63e-08,3;CL:0002581,7.57e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.67e-10!5;DOID:450!4.67e-10!5;DOID:66!4.67e-10!5;DOID:423!4.67e-10!5;DOID:0080000!4.67e-10!5;DOID:11722!4.67e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.05e-27;5!DOID:450;1.05e-27;5!DOID:66;1.05e-27;5!DOID:423;1.05e-27;5!DOID:0080000;1.05e-27;5!DOID:11722;1.05e-27;5!DOID:3369;3.16e-07;1!DOID:4235;8.00e-07;1!DOID:3571;8.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.45e-28,5;DOID:450,2.45e-28,5;DOID:66,2.45e-28,5;DOID:423,2.45e-28,5;DOID:0080000,2.45e-28,5;DOID:11722,2.45e-28,5;DOID:3369,2.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.78e-15!45;UBERON:0002416!6.78e-15!45;UBERON:0002097!2.19e-14!40;UBERON:0003102!7.95e-14!95;UBERON:0002384!4.54e-08!375;UBERON:0000914!5.41e-08!83;UBERON:0002329!5.41e-08!83;UBERON:0003077!5.41e-08!83;UBERON:0003059!5.41e-08!83;UBERON:0007282!5.41e-08!83;UBERON:0009618!5.41e-08!83;UBERON:0007285!5.41e-08!83;UBERON:0001637!6.39e-08!42;UBERON:0003509!6.39e-08!42;UBERON:0004572!6.39e-08!42;UBERON:0000415!2.12e-07!4;UBERON:0007240!2.12e-07!4;UBERON:0005742!2.12e-07!4;UBERON:0005734!2.12e-07!4;UBERON:0004664!2.12e-07!4;UBERON:0004663!2.12e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.51e-15;41!UBERON:0002199;4.85e-13;46!UBERON:0002416;4.85e-13;46!UBERON:0003102;6.13e-09;50!UBERON:0007846;2.79e-08;3!UBERON:0000043;2.79e-08;3!UBERON:0007845;2.79e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.47e-21,41;UBERON:0002199,1.72e-18,46;UBERON:0002416,1.72e-18,46;UBERON:0003102,1.83e-08,99;UBERON:0007846,3.63e-08,3;UBERON:0000043,3.63e-08,3;UBERON:0007845,3.63e-08,3;UBERON:0002384,7.47e-07,371 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,0.434539556882471,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.633152558322899,1.85372853138506,0.860509862246441,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.298897361103602,0.587172493218824,0.161872944368132,0.98315564691574,0.816616685019573,0.61417158655884,0,0,0.247266929278557,0,0,0.505008341862199,0.250237039743928,0.554128230968366,0,1.83892677479412,0.300476117813194,0.113432183160021,1.25572744982203,1.92201649936711,1.69545520927649,2.40072876867522,1.8549455262919,5.15281080091258,1.67505170698431,4.05063197379039,3.70260619612555,2.52433774244115,0.644349290496095,2.10139873864455,1.42003837006646,2.21654616100809,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,2.14114786556594,1.57702415033935,1.40569697991256,0.300946099727719,0,1.03473071292505,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.767309866440312,0.841980283299221,0.256278298511402,1.53512174720011,0.321707842287215,1.48418066444991,0.462629081407967,0.710246901252508,0.492762936082855,0,0.464841513839837,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,2.20368642781448,0,0.308033580176089,0,0.869932992075073,0,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0.539617372749944,0,0.117812402345686,0.202182481573316,0,0,0,0.731140468893853,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0.608731130888112,0.30982349809975,0.563391205064483,0,0,0,0.354761064070598,0,1.64647446479951,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,10.2232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.233713309847224,0,0.189403005275089,0,0,0.457680136793847,0,1.08806040407946,0.147855149989634,0,0,0,0,1.06336685823198,0,0,0.380805212168795,0,0,0,0,0,0,1.03018711554838,1.01024846629776,1.26184898228651,0,0,0,0.906823702049089,1.85217979459067,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.218419276384028,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.347716544605159,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr6:113697548..113697566,- | |||
}} |
Revision as of 17:28, 13 September 2013
Short description: | p@chr6:113697548..113697566, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:113697548..113697566, - |
Coexpression cluster: | C2837_liposarcoma_Fibroblast_Ewing_Olfactory_mesothelioma_Smooth_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.09e-39 | 23 |
fibroblast | 1.82e-25 | 76 |
receptor cell | 5.33e-09 | 6 |
sensory epithelial cell | 5.33e-09 | 6 |
olfactory epithelial cell | 5.33e-09 | 6 |
fibrocyte | 3.63e-08 | 3 |
tendon cell | 3.63e-08 | 3 |
perirenal preadipocyte | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.47e-21 | 41 |
integument | 1.72e-18 | 46 |
integumental system | 1.72e-18 | 46 |
surface structure | 1.83e-08 | 99 |
dense regular connective tissue | 3.63e-08 | 3 |
tendon | 3.63e-08 | 3 |
regular connective tissue | 3.63e-08 | 3 |
connective tissue | 7.47e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.45e-28 | 5 |
myotonic disease | 2.45e-28 | 5 |
muscle tissue disease | 2.45e-28 | 5 |
myopathy | 2.45e-28 | 5 |
muscular disease | 2.45e-28 | 5 |
myotonic dystrophy | 2.45e-28 | 5 |
peripheral primitive neuroectodermal tumor | 2.82e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.