FFCP PHASE1:Hg19::chr6:111927135..111927147,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10758|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1343|TSSclassifier=S|UniProt=|association_with_transcript=17bp_to_ENST00000528599_5end|description=CAGE_peak_6_at_TRAF3IP2_5end|id=chr6:111927135..111927147,-|ontology_enrichment_celltype=CL:0000055!4.31e-17!180;CL:0000057!1.68e-10!75;CL:0002620!6.59e-09!23|ontology_enrichment_celltype_v019=CL:0000153;1.41e-10;9!CL:0000447;1.41e-10;9!CL:0000138;1.66e-09;6!CL:0002620;5.42e-09;23|ontology_enrichment_celltype_v019_2=CL:0000153,1.26e-10,9;CL:0000447,1.26e-10,9;CL:0000058,1.42e-09,6;CL:0000138,1.42e-09,6;CL:0002620,2.33e-09,23;CL:0000136,4.31e-07,15;CL:0000057,4.39e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!6.70e-11!365;UBERON:0002199!2.97e-09!45;UBERON:0002416!2.97e-09!45;UBERON:0003102!6.07e-09!95;UBERON:0002097!1.03e-08!40;UBERON:0000486!2.42e-08!82;UBERON:0001049!2.44e-08!57;UBERON:0005068!2.44e-08!57;UBERON:0006241!2.44e-08!57;UBERON:0007135!2.44e-08!57;UBERON:0000914!4.01e-08!83;UBERON:0002329!4.01e-08!83;UBERON:0003077!4.01e-08!83;UBERON:0003059!4.01e-08!83;UBERON:0007282!4.01e-08!83;UBERON:0009618!4.01e-08!83;UBERON:0007285!4.01e-08!83;UBERON:0000468!5.43e-08!659;UBERON:0000467!1.56e-07!625;UBERON:0000480!2.22e-07!626;UBERON:0003075!2.78e-07!86;UBERON:0007284!2.78e-07!86;UBERON:0004290!7.79e-07!70|ontology_enrichment_uberon_v019=UBERON:0002097;4.98e-09;41!UBERON:0002199;3.38e-08;46!UBERON:0002416;3.38e-08;46!UBERON:0000125;1.14e-07;9!UBERON:0002308;1.14e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.39e-12,41;UBERON:0002199,1.42e-12,46;UBERON:0002416,1.42e-12,46;UBERON:0000125,2.43e-08,9;UBERON:0002308,2.43e-08,9;UBERON:0010371,2.68e-07,104;UBERON:0001049,7.42e-07,56;UBERON:0005068,7.42e-07,56;UBERON:0006241,7.42e-07,56;UBERON:0007135,7.42e-07,56|phase1_expression=0.908391896352783,1.2846031433459,1.69145284915165,1.0007329835313,1.34088328328186,0,0,0.631719873426831,2.61185628199839,0.491467873003018,0,0.218441372130172,0,1.23766352960047,0,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0.286235987131057,0.958120975510189,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0,0.154816123316076,0.919421224478927,0,0.739508020333575,0,0,0,2.21598163412751,0.200544447470142,0.217010870715852,0,0,0,0.436194716338694,0.755751887377619,0,0,0.822335776043652,0.619412741790207,0,0.256160706529101,0.236482229888585,3.44745680736619,2.5819387343353,1.35426486594342,0,0,0.224723484445085,0.306083892370903,1.60464513538047,0.639337125799041,0.329851300186716,0.398927315243264,0,2.03146467040009,2.8369261234557,0,0.251248665256743,0.521482918420201,0.217188844705117,2.42159801053347,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,2.43806866313962,0,0,3.61439152384566,8.52274448081012,4.05570253090306,3.9764297352555,6.8128881842369,0.283604451492204,0.443458794925128,0,0.458426764241994,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,3.05265836499774,0.496971951695318,0.379891534993739,1.45650098894541,0.573673241497627,0,1.12135520028461,1.06748995729705,1.48000529050296,0.933633106199299,0.134710672069688,0.163461903113459,0,0,0,1.24864030732128,0.570471821544449,1.04614076386261,0.469737994575059,0.485618833104395,0.140450806702248,0.408308342509787,0.122834317311768,0.619954687054593,2.37600571456411,0.989067717114227,1.82032272387605,2.15585442544872,0.336672227908132,0.375355559615893,0.831192346452549,3.5118209670467,0.919463387397059,2.40380894250555,0.226864366320042,1.25572744982203,1.2813443329114,1.69545520927649,0.600182192168805,1.95799805553034,2.57640540045629,0.744467425326359,1.85653965465393,1.46155507741798,4.03894038790583,1.19664868234989,1.61646056818812,2.4850671476163,1.41052937518696,1.86516651541536,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,6.25798129319264,1.28648187638577,1.38134921352481,1.39310378409594,3.60939740834793,0,0.337169380156203,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0,1.40241773803446,0,0,0,0,0,0,0,0,1.31700342490351,0,0.402115889646523,0.740707561268237,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0,0,0.858486162094873,0,0.234004265139238,0.445893486866185,0,0.335964256397719,0.283550194484773,0.895585227028483,1.45316969256981,1.15014803749563,0.985326475791887,0.176096868026452,1.4512968087854,0.864719720501769,0.6312121671319,0.888970520090367,2.67391897890794,4.68869788840188,1.71072446022705,1.54241239054985,3.30377363628309,1.14330573052231,0.11213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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10758 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1343 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENST00000528599_5end | |||
|description=CAGE_peak_6_at_TRAF3IP2_5end | |||
|id=chr6:111927135..111927147,- | |||
|ontology_enrichment_celltype=CL:0000055!4.31e-17!180;CL:0000057!1.68e-10!75;CL:0002620!6.59e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.41e-10;9!CL:0000447;1.41e-10;9!CL:0000138;1.66e-09;6!CL:0002620;5.42e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.26e-10,9;CL:0000447,1.26e-10,9;CL:0000058,1.42e-09,6;CL:0000138,1.42e-09,6;CL:0002620,2.33e-09,23;CL:0000136,4.31e-07,15;CL:0000057,4.39e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.70e-11!365;UBERON:0002199!2.97e-09!45;UBERON:0002416!2.97e-09!45;UBERON:0003102!6.07e-09!95;UBERON:0002097!1.03e-08!40;UBERON:0000486!2.42e-08!82;UBERON:0001049!2.44e-08!57;UBERON:0005068!2.44e-08!57;UBERON:0006241!2.44e-08!57;UBERON:0007135!2.44e-08!57;UBERON:0000914!4.01e-08!83;UBERON:0002329!4.01e-08!83;UBERON:0003077!4.01e-08!83;UBERON:0003059!4.01e-08!83;UBERON:0007282!4.01e-08!83;UBERON:0009618!4.01e-08!83;UBERON:0007285!4.01e-08!83;UBERON:0000468!5.43e-08!659;UBERON:0000467!1.56e-07!625;UBERON:0000480!2.22e-07!626;UBERON:0003075!2.78e-07!86;UBERON:0007284!2.78e-07!86;UBERON:0004290!7.79e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.98e-09;41!UBERON:0002199;3.38e-08;46!UBERON:0002416;3.38e-08;46!UBERON:0000125;1.14e-07;9!UBERON:0002308;1.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.39e-12,41;UBERON:0002199,1.42e-12,46;UBERON:0002416,1.42e-12,46;UBERON:0000125,2.43e-08,9;UBERON:0002308,2.43e-08,9;UBERON:0010371,2.68e-07,104;UBERON:0001049,7.42e-07,56;UBERON:0005068,7.42e-07,56;UBERON:0006241,7.42e-07,56;UBERON:0007135,7.42e-07,56 | |||
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| |||
|short_description=p6@TRAF3IP2 | |||
}} |
Revision as of 17:25, 13 September 2013
Short description: | p6@TRAF3IP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TRAF3IP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000528599_5end |
EntrezGene: | TRAF3IP2 |
HGNC: | 1343 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.26e-10 | 9 |
carbohydrate secreting cell | 1.26e-10 | 9 |
chondroblast | 1.42e-09 | 6 |
chondrocyte | 1.42e-09 | 6 |
skin fibroblast | 2.33e-09 | 23 |
fat cell | 4.31e-07 | 15 |
fibroblast | 4.39e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.39e-12 | 41 |
integument | 1.42e-12 | 46 |
integumental system | 1.42e-12 | 46 |
neural nucleus | 2.43e-08 | 9 |
nucleus of brain | 2.43e-08 | 9 |
ecto-epithelium | 2.68e-07 | 104 |
neural tube | 7.42e-07 | 56 |
neural rod | 7.42e-07 | 56 |
future spinal cord | 7.42e-07 | 56 |
neural keel | 7.42e-07 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.